BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	974316 =	23 (0.050)	41 (0.090)	16/190	30.3	0.37	intergenic (+196/+63)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
*	?	NC_014034	1965277 =	116 (0.250)	41 (0.090)	16/190	30.3	0.37	intergenic (+45/+47)	bdhA/RCAP_rcc01818	3‑hydroxybutyrate dehydrogenase/hypothetical protein
Rejected: Position hash score below cutoff.

Only 100 of 155 total aligned reads displayed.


CGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTGCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GCGGG.CT.CC.G.CCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTCGGC  >  NC_014034/1965177‑1965374


cggcgCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GGGG.CGACCCGCC..CGGGG.CT.c                                                                                                      >  2:1114634/1‑101 (MQ=39)


   cgcAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CG.CC.G.c                                                                                                 >  1:7583846/1‑101 (MQ=255)


     cAGGTCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CG.CC.C.ccc                                                                                               >  1:7229250/1‑101 (MQ=38)


      aGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GG.CC.C.ccc.c                                                                                             >  1:4735328/1‑101 (MQ=38)


      aGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.G.ccc.c                                                                                             >  2:3442388/1‑101 (MQ=255)


          cACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GG.CC.C.ccc.ccccg                                                                                         >  2:410114/1‑97 (MQ=37)


            ccGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GC.CC.G.ccc.cccggcc                                                                                       >  1:8240335/1‑95 (MQ=37)


               gCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GG.CC.C.ccc.cccggccccc                                                                                    >  2:6821550/1‑92 (MQ=25)


                cACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GC.CC.G.ccc.cccccgcaccc                                                                                   >  2:3264099/1‑91 (MQ=25)


                   gacgaTTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..CGGGG.GT.CC.GCCCC.CGGACCCCCGAgg                                                                                 >  2:5963352/1‑101 (MQ=37)


                      gaTTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTTGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GT.CC.GCCCC.CGGGGCCCCGAGGGAt                                                                              >  1:2989998/1‑101 (MQ=25)


                       aTTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..CGGGG.CT.CC.GCCCC.CCGACCCCCGAGGGAtt                                                                             >  1:2802488/1‑101 (MQ=25)


                        tttCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GTCCC.C.CCC.CCGGCCCCCCAGGGAttt                                                                            >  1:5936307/1‑101 (MQ=21)


                         ttCTGCGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CTCCC.C.CCC.CGGACCCCCGAgggagtgc                                                                           >  2:8970865/1‑95 (MQ=21)


                         tggtggggggggcggcGGGCGGGCGTTGGGAGAGATTCCGCCGG.GGGGCACCCCC.GGGG.CCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTc                                                                           <  2:7221878/91‑1 (MQ=9)


                           gtggggggggcggcGGCGCGGCTCGGTGAGAGTTCGCGCCGG.GGGCCAGCCCC.GGGC.CCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAg                                                                         <  2:5936072/93‑1 (MQ=2)


                           cTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CTCCC.C.CCC.CGGACCCCCGAGGGATTTccg                                                                         >  2:4280292/1‑99 (MQ=25)


                            tgtgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GT.TC.GCCCC.CCGGCCCCCCCGGTATTTTAgg                                                                        >  2:6616805/1‑101 (MQ=18)


                            tgtgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGCGGGATTTCAgg                                                                        >  2:1662911/1‑101 (MQ=25)


                            tgggggtGGCGGCGGGCCGGCGCTGGGAGACTTCCCCCCGG.GGGGCACGCCG.GGGC.CCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAgg                                                                        <  1:2897386/95‑1 (MQ=2)


                             gtgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCCCGGGGGG.CC.CC.C.CCC.CGGCCCCCCCAggacttctcgg                                                                        >  1:5870839/1‑92 (MQ=21)


                             gtgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CTCCC.C.CCC.CCGACCCCCGCGGGATTTCCGGc                                                                       >  1:2249429/1‑101 (MQ=21)


                              tgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GT.CC.GCCCC.CGGACCCCCCGGGGATTTCAGGCa                                                                      >  2:5636575/1‑101 (MQ=21)


                              tgGATGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CC.CC.GCCCC.CCGGCCCCCCGGGGATTTCCGGCa                                                                      >  1:7108094/1‑101 (MQ=18)


                                gggggcggcGGGCGGGCGTGGTGAGGGTTTCCGCCGG.GGGGCACCCCC.GGGC.CCCCCCGCC..GGGGG.CT.CT.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAg                                                                    <  1:6107488/98‑1 (MQ=2)


                                 aTGGCGGCTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CGGGCCCCCCGGGGATTTCCgggcagg                                                                   >  2:5237564/1‑96 (MQ=18)


                                  tGGCGGCTGGACGGCGCTGTGAGAGATATCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GT.CCGG.CCC.CCGCCCCCCGCGGGAtttgcagccagaa                                                                  >  2:2112683/1‑91 (MQ=16)


                                  gggcggcGGGCGGGGGTTGTGAGAGTTTCCCCCGG.GGGGCACGCCG.GGGG.CCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGAt                                                                  <  2:5539946/100‑1 (MQ=9)


                                   ggcggcGGGGGGGCGGGGTGAGAGTTCCCGCCGG.GGGCCAGCCCC.GAGG.CGCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATg                                                                 <  2:7690983/101‑1 (MQ=2)


                                     gggggggggggCGGTGTGAGAGCTTCGGCCGG.GGGGCAGGCCG.GGGG.CCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGaa                                                               <  2:2964024/92‑1 (MQ=9)


                                     cgggTGGACGGCGTTGGGAGGGTTGCCGCCGG.GGGGCACCCCC.GGGC.CCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGaa                                                               <  2:113992/101‑1 (MQ=2)


                                      ggcTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGGATTTCAGGCAAGATGaaa                                                              >  1:1299692/1‑101 (MQ=21)


                                       gggggcgggCGGTGGGAGAGTTTCCGCCGG.GGGCCAACCCG.GGGC.CCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAag                                                             <  2:4718566/94‑1 (MQ=2)


                                       gcTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGGCCC.CC.C.CCC.CCGGCCCCCCCGGGATTTTCGGCAAGATGaaaa                                                             >  1:621864/1‑100 (MQ=12)


                                        cTGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCCGGGGGGG.CC.CC.C.CCC.CGGCCCCCCCGGGGTTTTCAGCGAAGAGGaaaa                                                             >  1:2513049/1‑100 (MQ=12)


                                         tGGACGGCGCTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGGATTTCAGGCAAGATGAAagag                                                           >  2:5093515/1‑101 (MQ=21)


                                           gggggCGGTGTGAGAG.TTCCCCCGCGGGGGCACCCCC.GAGC.CCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAggg                                                         <  2:3614019/98‑1 (MQ=9)


                                                 gcTGTGAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCCGGGGGGG.GC.CC.C.CCC.CGCGCCCCCGCGGGGTTTCAGCCAGGAGGAAAAAGGGgggcc                                                    >  2:2069025/1‑100 (MQ=9)


                                                    gtgAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GT.CC.GCCCC.CGGGCCCCCCAGGGATTTTAGGCAAGATGAAAGAggggggggcagg                                                >  2:7787975/1‑93 (MQ=18)


                                                     tgAGAGATTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGCGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCAggg                                               >  2:8295888/1‑100 (MQ=21)


                                                      gagagaTTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GT.CC.GCCCC.CGGGCCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCCGAggcg                                              >  2:3666811/1‑101 (MQ=21)


                                                       agagaTTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCCAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCCggcgg                                             >  2:8234648/1‑101 (MQ=21)


                                                           aTTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCCAGGGATTTCAGGCAAGATGAAAGAGGGGCGCCCAGGCGGCctt                                         >  1:5798850/1‑101 (MQ=21)


                                                           aTTTCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CCGGCCCCCCAGGGCTTTCGGGCAAGATGAAAAAGGGGGGCTCAGGCGGcccc                                         >  1:8385315/1‑99 (MQ=16)


                                                            tctccgcgc.GGGGCAACCCCGGCGG.CCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCctt                                         <  2:8669000/93‑1 (MQ=18)


                                                               cgcGTC.GGGGCAAGCGC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGGATTTCAGGCAAGATGAAAGAGGAGCGCTCAGGCGGCCttcttc                                     >  1:8825620/1‑101 (MQ=21)


                                                                   ccgggggCCAGCCC.GGGGCCCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTcgc                                   <  2:5360321/98‑1 (MQ=21)


                                                                    gggggccgcgCCC.GGCG.CGCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTcgccg                                 <  2:8070416/92‑1 (MQ=18)


                                                                    c.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.GT.CC.GCCCC.CCGACCCCCCAGGGATTTCCGGCAAGATGGAAGAGGGGGGCTCAGGCGGCCTTTCTcgccgc                                >  2:8142677/1‑101 (MQ=21)


                                                                    c.GGGGCAAGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CCGGCCCCCCCGGGATTTCAGGCCAGATGAAAGAGGGGCGCTCAGGCGGCCCTCTTcgccgc                                >  1:1493935/1‑101 (MQ=21)


                                                                     ggggcCAAGCCC.GGCG.CCCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTcgccgc                                <  1:861366/100‑1 (MQ=21)


                                                                      ggggCAAGCCC.GAGG.CGACCCGCCG.GGGGG.GC.CC.C.CCC.CCGACCCCCCCGGGATTTCAGGCAAAAAGAAAAAAGGGCGCTTCGGCGGCCTTCTTCgccccc                               >  2:2724938/1‑101 (MQ=12)


                                                                           aaGCCC.GAGG.CGACCCGCC..GGGGG.CTCCC.C.CCC.CCGGCCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCCGGCGGCCTTCTTCGCCGCCCTGcc                          >  2:8364642/1‑101 (MQ=21)


                                                                           aaGCCC.GAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCCTCTTCGCCGCCTTGcc                          >  2:1371645/1‑101 (MQ=21)


                                                                              ccc.GAGG.CGACCCGCC..GGGGG.CTCCC.C.CCC.CCGACCCCCCAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCCTGccccg                       >  2:7044733/1‑99 (MQ=21)


                                                                                c.GAGG.CGACCCGCC..GGGGG.GTCCC.C.CCC.CCGACCCCCCAGGGAATTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCCTGCCCgggg                     >  2:5625296/1‑99 (MQ=21)


                                                                                c.GAGC.CGCCCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGgtg                     <  2:3202607/101‑1 (MQ=25)


                                                                                 cggggcccccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGgt                      <  2:1627820/92‑1 (MQ=25)


                                                                                 ccggccccccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGgt                      <  1:1943294/92‑1 (MQ=25)


                                                                                 ccgcggccccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGgt                      <  1:3687327/92‑1 (MQ=25)


                                                                                  gAGG.CGACCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGGATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGgtgt                    >  2:7238006/1‑101 (MQ=25)


                                                                                   aGG.CGACCCGCC..GGGGG.GT.CC.GCCCC.CCGACCCCCGAGGGATTTCCGGCAAGATGAAAGAGGGGCGCCCAGGCGGCCCTCTTCGCCGCCCTGCCCCgtggc                   >  2:2894662/1‑99 (MQ=18)


                                                                                    gggccccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtc                   <  2:4123805/95‑1 (MQ=25)


                                                                                     gccgccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtct                  <  2:8972161/96‑1 (MQ=25)


                                                                                     gcccccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtct                  <  2:8754701/96‑1 (MQ=25)


                                                                                      cccccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtctc                 <  1:5277929/97‑1 (MQ=25)


                                                                                      cccccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGtctc                 <  1:5406111/97‑1 (MQ=25)


                                                                                       ccccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCg                <  2:8221958/98‑1 (MQ=37)


                                                                                       ccccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCg                <  2:7107790/98‑1 (MQ=37)


                                                                                       ccccccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCg                <  1:8056243/98‑1 (MQ=37)


                                                                                        gACCCGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCCAGGGATTTCAGGCAAGATGAAAGAGGGGGGCTCAGGCGGCCTTCTTTCCCGCCTTGCCCGGGGTCTCgg               >  2:5398435/1‑101 (MQ=21)


                                                                                        cccccGCC..GGGGG.CT.TC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCgg               <  1:8000229/99‑1 (MQ=37)


                                                                                          cccGCC..GGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGc             <  1:1662958/101‑1 (MQ=255)


                                                                                           ccgcc..gGGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGct            <  2:7401024/101‑1 (MQ=255)


                                                                                            cgcc..ggGGG.CT.CC.GCCCC.CGTACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGctt           <  1:5625503/101‑1 (MQ=37)


                                                                                            cgcc..ggGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGctt           <  1:8752861/101‑1 (MQ=255)


                                                                                             gcc..ggGGG.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGcttc          <  2:3831917/101‑1 (MQ=255)


                                                                                                 cggggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGcttctt        <  2:7356430/98‑1 (MQ=255)


                                                                                                 cggggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGcttctt        <  2:5798615/98‑1 (MQ=255)


                                                                                                 cggggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGcttctt        <  1:1546011/98‑1 (MQ=255)


                                                                                                  ggggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTg       <  1:1135582/99‑1 (MQ=255)


                                                                                                  ggggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTg       >  1:7268734/3‑101 (MQ=255)


                                                                                                  ggggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTg       >  1:7513422/3‑101 (MQ=255)


                                                                                                  ggggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTg       <  2:6665147/99‑1 (MQ=255)


                                                                                                  ggggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCCCCTTGCCCGGGGCCTCGGGCTTCTTg       >  1:5169890/3‑101 (MQ=37)


                                                                                                   gggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTgc      >  2:344817/2‑100 (MQ=255)


                                                                                                   gggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGt      >  2:1165664/2‑101 (MQ=255)


                                                                                                   gggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGt      >  1:4636400/2‑101 (MQ=255)


                                                                                                   gggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGt      >  1:3924748/2‑101 (MQ=255)


                                                                                                   gggg.CT.CC.G.CCCACGGGCCCCCGAGGTATTTCAAGCAAGATGAAAGAGGGGCGCTCAGGATGCATTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGt      <  1:9119101/100‑1 (MQ=255)


                                                                                                   gggg.AT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGt      <  1:6046976/100‑1 (MQ=255)


                                                                                                    ggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTc     <  2:7706394/101‑1 (MQ=255)


                                                                                                    ggg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTc     <  2:6133001/101‑1 (MQ=255)


                                                                                                     gg.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTCg    >  1:6171899/1‑101 (MQ=255)


                                                                                                      g.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTCgg   <  2:904870/101‑1 (MQ=255)


                                                                                                      g.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTCgg   >  1:2512145/1‑101 (MQ=255)


                                                                                                      g.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTCgg   >  2:4858830/1‑101 (MQ=255)


                                                                                                      g.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTCgg   >  1:937916/1‑101 (MQ=255)


                                                                                                      g.CT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTCgg   >  2:4451801/1‑101 (MQ=255)


                                                                                                        cT.CC.GCCCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTCGGc  >  1:2111976/1‑101 (MQ=255)


CGGCGCAGATCACCGGCACGACGATTTCTGTGGATGGCGGCTGGACGGCGCTGTGAGAGATTGCGCCTC.GGGGCAAGCCC.GAGG.CGACCCGCC..GCGGG.CT.CC.G.CCC.CGGACCCCCGAGGTATTTCAGGCAAGATGAAAGAGGGGCGCTCAGGCGGCCTTCTTCGCCGCCTTGCCCGGTGTCTCGGGCTTCTTGTCGGC  >  NC_014034/1965177‑1965374

Base quality scores:


ATCG

< 3 ≤


ATCG

< 15 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG