| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,556 | C→A | 13.5% | intergenic (+368/‑563) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,556 | 0 | C→A | 13.5% | 205.5 ‑0.3 ‑0.0 | 613 | intergenic (+368/‑563) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (43/40): ref base (261/268): total (305/308) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.24e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.26e-01 | ||||||||||
Only 100 of 649 total aligned reads displayed.
GGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGG > NC_014034/1395456‑1395656
|
aTCGAAACATCGTCGCTTTGGCGGTTGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCg > 1:6527748/1‑101 (MQ=255)
cGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.c < 2:5161117/101‑1 (MQ=255)
gAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.cc < 2:910809/101‑1 (MQ=255)
aaaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCt < 1:139914/101‑1 (MQ=255)
aaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.g > 1:168157/1‑101 (MQ=255)
aaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.g > 1:7393583/1‑101 (MQ=255)
cATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.Gcc > 2:2022417/1‑100 (MQ=255)
gccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCtcgtc < 2:8532970/101‑1 (MQ=255)
cTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTc > 1:7935480/1‑101 (MQ=255)
tGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTcccc > 2:7183367/1‑101 (MQ=255)
ggTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCcgc < 2:4972721/101‑1 (MQ=255)
gTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCcgcg > 1:7567934/1‑101 (MQ=255)
cGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCcgcgtg > 1:6794157/1‑99 (MQ=255)
gACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGGCGGCGCTCG.TCCAGCGGG.CCG.GCTCGCTGATCCCCCCGCaggg > 1:2942344/1‑101 (MQ=25)
aCAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCggggg > 1:8498380/1‑101 (MQ=255)
aCAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCggggg < 2:3730513/101‑1 (MQ=255)
gCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTg < 1:6436086/101‑1 (MQ=255)
cTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTgg < 1:5076726/101‑1 (MQ=255)
agcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTgg < 1:4856064/91‑1 (MQ=0)
agcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTgg < 1:2442690/91‑1 (MQ=0)
ccctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGa < 1:4193187/92‑1 (MQ=2)
ccctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGa > 1:540143/10‑101 (MQ=2)
aggccggtggtCGCTCCCCCTGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGa < 1:5640027/92‑1 (MQ=0)
ggTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:3878431/101‑1 (MQ=255)
gccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:2180683/94‑1 (MQ=2)
gTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:6252423/101‑1 (MQ=255)
ctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:387315/94‑1 (MQ=2)
ctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:2203188/8‑101 (MQ=2)
atcccgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.GATGATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:4849076/94‑1 (MQ=0)
tagcGTGTCGCTCCCCCCGCTGTGGGGTGGAGCGAGACATC.TCGGTGGCGTCGCGCG.GCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:3778071/98‑1 (MQ=25)
taccgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.GATGATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:4692891/95‑1 (MQ=2)
gcggcggtCGCGCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:929655/95‑1 (MQ=2)
ccggttgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:455277/96‑1 (MQ=2)
cgcacgtggCTCCCCCCGGGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 1:5869474/93‑1 (MQ=2)
tgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:658029/5‑101 (MQ=2)
ggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCGCCGCGGGGGCGTGGATCGaa > 1:7233711/5‑101 (MQ=2)
gcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:5325948/5‑101 (MQ=2)
cgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.GATGATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:9054990/98‑1 (MQ=2)
ctacGCTCCCCCCGCGGGGGCGTGGATCCAAACATC.GATGATCAAACCCACA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:3071953/98‑1 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCG.GCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacg < 2:1869087/101‑2 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactg > 2:7961543/1‑99 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacta > 2:2678889/1‑99 (MQ=2)
tccgcgcccccGCGGGGGGGGGGGTGGAACCATC.TCGGTGCCGCCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccac < 2:1419855/95‑1 (MQ=25)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactat > 1:8913291/1‑98 (MQ=2)
ccgaccccccGCCGGGGCGTGGATCAAAACATC.TCGTTTCCGTCCCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccacc < 2:2942246/97‑1 (MQ=37)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccg < 2:8977377/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatg > 1:7613918/1‑97 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatg > 1:2850166/1‑97 (MQ=2)
cGCGCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccg < 1:3547722/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCt < 1:6713629/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgt < 1:873460/101‑6 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgg > 2:5963056/1‑96 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgc < 1:3986629/101‑5 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgc < 1:5537300/101‑6 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtg < 1:1320837/101‑7 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgct > 1:861247/1‑95 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgc > 1:3141886/1‑94 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcgg > 2:1787650/1‑95 (MQ=2)
cccccccGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTg < 1:4446809/100‑1 (MQ=255)
cccccccGCGGGGGCGTGGATCAAAACATC.TCGGTCCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTg < 2:3304589/100‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc > 1:6147512/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc < 1:8021347/101‑8 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctgg > 1:2002856/1‑93 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctggc < 2:6492797/101‑10 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCgg < 2:8649667/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGt < 2:5801237/101‑1 (MQ=255)
gggggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTc > 1:525849/1‑101 (MQ=255)
ggggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCa < 1:2280388/101‑1 (MQ=255)
gggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCAc < 2:2862725/101‑1 (MQ=255)
ggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACt > 1:437379/1‑101 (MQ=255)
ggTGGATCGAAACATC.CCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACttt < 2:786285/100‑1 (MQ=255)
cGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACttt > 2:4012143/1‑101 (MQ=255)
cGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACttt > 2:6257312/1‑101 (MQ=255)
ggATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTcgc > 2:4075355/1‑101 (MQ=255)
ggATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTcgc > 1:2702530/1‑101 (MQ=255)
ggATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTcga > 1:769660/1‑100 (MQ=255)
ggATCGAAACATC.TCGGTGACGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTcgc > 2:1167600/1‑101 (MQ=255)
aaCATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGa < 2:6809531/101‑1 (MQ=255)
aaCATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACGTTCGCGGGGCGa < 1:8247857/101‑1 (MQ=255)
aTC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGc > 1:7832439/1‑101 (MQ=255)
tcGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTc < 1:1821323/101‑1 (MQ=255)
cGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTTGTC.CTTTCCGGGGGCGCAgggcgg > 2:4274490/1‑96 (MQ=25)
cGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCg > 1:4986494/1‑101 (MQ=255)
ggTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGc > 2:155663/1‑101 (MQ=255)
gTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCt > 2:7559985/1‑101 (MQ=255)
gTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCt < 2:8225408/101‑1 (MQ=255)
gCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAGCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTcc < 2:4455101/101‑1 (MQ=255)
gCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTcc > 2:6163794/1‑101 (MQ=255)
tCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc > 2:5567441/1‑101 (MQ=255)
tCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc < 2:7692140/101‑1 (MQ=255)
cGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCcg > 2:738218/1‑101 (MQ=255)
cGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCcg < 1:3452536/101‑1 (MQ=255)
cGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCcg > 2:8437667/1‑101 (MQ=255)
cGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCcg > 2:245200/1‑101 (MQ=255)
tCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCgg > 1:104875/1‑101 (MQ=255)
cG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCggg > 2:3561710/1‑101 (MQ=255)
g.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCgggg > 2:7034036/1‑101 (MQ=255)
cAGCCGG.CCT.GCACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCg < 1:593048/101‑1 (MQ=255)
ccGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTgg < 2:4746065/101‑1 (MQ=255)
ccGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTgg < 1:7183671/101‑1 (MQ=255)
|
GGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGA.TTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGG > NC_014034/1395456‑1395656
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|