| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,565 | T→C | 20.4% | intergenic (+377/‑554) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,565 | 0 | T→C | 20.4% | 205.7 ‑0.6 ‑0.2 | 600 | intergenic (+377/‑554) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (42/41): ref base (185/209): total (288/312) | ||||||||||
| Fisher's exact test strand distribution p-value = 5.48e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.94e-01 | ||||||||||
Only 100 of 643 total aligned reads displayed.
CATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA > NC_014034/1395465‑1395665
|
aTCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCtc > 1:8521109/1‑101 (MQ=255)
gccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCtcgtc > 2:9048046/1‑101 (MQ=255)
tttGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TGGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTcc > 1:6572113/1‑101 (MQ=255)
tttGGCGGTCGACAGGCTGGGAACGTGCCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGCCGCTcc > 1:5929068/1‑101 (MQ=255)
tGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTcccc > 1:4392155/1‑101 (MQ=255)
gCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTcccccc < 1:2797691/101‑1 (MQ=255)
gTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCcgcg > 1:7196538/1‑101 (MQ=255)
cGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCggg < 1:7726037/101‑1 (MQ=255)
gACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCgggg > 1:141549/1‑101 (MQ=255)
cAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGc < 1:7880159/101‑1 (MQ=255)
aGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCg > 1:450028/1‑101 (MQ=255)
gccctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTgg < 1:5382477/91‑1 (MQ=0)
cTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTgg < 1:2284555/101‑1 (MQ=255)
agcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTgg < 1:2442690/91‑1 (MQ=0)
aaggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTgg < 1:2912554/91‑1 (MQ=2)
tGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGa > 2:3785183/1‑101 (MQ=255)
aggccggtggtCGCTCCCCCTGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGa < 1:5640027/92‑1 (MQ=0)
ggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:3690671/93‑1 (MQ=2)
ggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGAt < 2:594796/93‑1 (MQ=2)
ggTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGAt > 2:7727392/1‑101 (MQ=255)
ggTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:3878431/101‑1 (MQ=255)
tagcGTGTCGCTCCCCCCGCTGTGGGGTGGAGCGAGACATC.TCGGTGGCGTCGCGCG.GCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:3778071/98‑1 (MQ=25)
taccgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.GATGATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:4692891/95‑1 (MQ=2)
cgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 2:289991/6‑101 (MQ=2)
aaCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 1:2577310/1‑101 (MQ=255)
aaCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGa < 2:7468184/101‑1 (MQ=255)
aaCGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 2:3522281/1‑101 (MQ=255)
ggtggccGCGCCCCCCGCGGGCGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:7576541/95‑1 (MQ=2)
gcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 2:5325716/5‑101 (MQ=2)
cgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.GATGATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:6208706/98‑1 (MQ=2)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaca > 2:4592983/1‑99 (MQ=255)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaac > 1:1236915/1‑100 (MQ=255)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:6494940/1‑101 (MQ=255)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:295054/1‑101 (MQ=255)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:9048468/101‑1 (MQ=255)
tggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:7884938/99‑1 (MQ=2)
tggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac > 2:6099803/3‑101 (MQ=2)
gtgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:795459/101‑1 (MQ=255)
gtgtCCCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:40575/101‑1 (MQ=255)
acgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:5737871/99‑1 (MQ=2)
acgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCA.GCCCGTCGCTCCCCCCGCGGGGGCGAGGATCGAAac > 1:8112306/3‑101 (MQ=2)
acgtCGCCCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 1:6814963/99‑1 (MQ=2)
ggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAact < 1:4196868/100‑2 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCG.GCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacg < 2:1869087/101‑2 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccc > 2:6703964/1‑100 (MQ=255)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactg < 1:5491698/101‑3 (MQ=2)
ggcGCCCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacca < 1:8868868/99‑1 (MQ=255)
tccgcgcccccGCGGGGGGGGGGGTGGAACCATC.TCGGTGCCGCCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccac < 2:1419855/95‑1 (MQ=25)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccac > 1:7298447/1‑101 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgc < 1:4928526/101‑4 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgc < 1:5863125/101‑4 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactat > 2:854082/1‑98 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatg < 1:3305950/101‑5 (MQ=2)
cGCGCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccg < 1:3547722/101‑4 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCt > 2:1574000/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCt < 1:2022478/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgg > 1:8641261/1‑96 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgc < 1:3986629/101‑5 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgc > 2:5132853/1‑97 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACA.C.CCGGCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgct < 2:556544/101‑7 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgc > 1:3141886/1‑94 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgc > 2:870401/1‑94 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcgg > 2:6335805/1‑95 (MQ=2)
cccccccGCGGGGGCGTGGATCGAAACAAT.GCGGCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgc < 2:4972082/100‑8 (MQ=2)
cccccccGCGGGGGCGTGGATCAAAACATC.TCGGTCCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTg < 2:3304589/100‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGc > 2:2210904/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACAAA.AAGCCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc > 1:6147512/1‑94 (MQ=2)
ccGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAACACCTTGCGGAt < 1:9163856/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTg < 1:7468239/101‑1 (MQ=255)
gggggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTc < 2:2484220/101‑1 (MQ=255)
ggggCATGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCa < 2:1264255/101‑1 (MQ=255)
gggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCAc < 1:1690321/101‑1 (MQ=255)
gggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TACAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCAc > 2:4803827/1‑101 (MQ=255)
ggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACt < 1:7643225/101‑1 (MQ=255)
ggCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACt < 1:6753060/101‑1 (MQ=255)
gCGTGGATCGAACCATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACtt < 2:2715316/101‑1 (MQ=255)
gCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACtt > 1:5175997/1‑101 (MQ=255)
cGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACttt < 2:4006789/101‑1 (MQ=255)
cGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACttt < 2:4535872/101‑1 (MQ=255)
tGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTcg > 2:7261399/1‑101 (MQ=255)
tCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCggg > 2:7974419/1‑101 (MQ=255)
cGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCgggg < 1:5071792/101‑1 (MQ=255)
gAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGc > 1:6294451/1‑101 (MQ=255)
aaaCATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCg < 1:184963/101‑1 (MQ=255)
c.tcGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGt < 2:6527488/101‑1 (MQ=255)
tcGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTc < 1:8306242/101‑1 (MQ=255)
cGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTcc > 2:30869/1‑100 (MQ=255)
ggTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGc > 2:6892184/1‑101 (MQ=255)
gCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcc < 2:8445413/101‑1 (MQ=255)
ccGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTccc > 2:7125232/1‑101 (MQ=255)
gcGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTcccccc < 2:4414072/100‑1 (MQ=255)
gCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCcgc > 1:7594083/1‑101 (MQ=255)
tCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCgg > 1:104875/1‑101 (MQ=255)
g.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCgggg < 1:2182179/101‑1 (MQ=255)
tCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCggggg > 2:8229436/1‑101 (MQ=255)
ccAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGCAGCGTCGCCCCCCCCGCgggggg > 2:4263767/1‑100 (MQ=255)
ccGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTgg > 2:2038805/1‑101 (MQ=255)
cGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGa < 2:9128206/101‑1 (MQ=255)
g.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:4840342/101‑1 (MQ=255)
t.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:1737536/101‑1 (MQ=255)
|
CATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATC.TCGGTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACA > NC_014034/1395465‑1395665
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|