Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,787,352 G→C 2.0% intergenic (+77/+150) RCAP_rcc01649 → / ← RCAP_rcc01650 ABC transporter ATP‑binding protein/ABC transporter permease

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,787,3520G→C 2.0% 5.3 ‑1.7 ‑0.1297intergenic (+77/+150)RCAP_rcc01649/RCAP_rcc01650ABC transporter ATP‑binding protein/ABC transporter permease
Reads supporting (aligned to +/- strand):  new base (6/0):  ref base (202/88):  total (209/88)
Fisher's exact test strand distribution p-value = 1.84e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.08e-01

Only 100 of 359 total aligned reads displayed.

CCGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGCCCTCGGCGGTCA  >  NC_014034/1787252‑1787452
                                                                                                     |                                                                                                        
ccGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCg                                                                                                          >  1:4582903/1‑101 (MQ=255)
 cGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGc                                                                                                         >  1:230743/1‑101 (MQ=255)
     gcgGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGc                                                                                                     >  2:2884876/1‑101 (MQ=255)
      cgGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCg                                                                                                    <  1:6347356/101‑1 (MQ=255)
        gCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCggg                                                                                                  <  2:8504098/101‑1 (MQ=255)
          tGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGAc                                                                                                <  2:9094125/101‑1 (MQ=255)
          tGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGAc                                                                                                <  1:4158352/101‑1 (MQ=255)
           gAGCGAGGGGTGAGCGCGTTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACa                                                                                               <  2:590693/101‑1 (MQ=255)
            aGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACag                                                                                              <  1:623197/101‑1 (MQ=255)
             gCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACaga                                                                                             <  2:235576/101‑1 (MQ=255)
              cGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagag                                                                                            >  1:8477919/1‑101 (MQ=255)
              cGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagag                                                                                            <  1:1244402/101‑1 (MQ=255)
              cGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagag                                                                                            <  1:6617115/101‑1 (MQ=255)
               gAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAgg                                                                                           >  1:859531/1‑101 (MQ=255)
                aGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagagag                                                                                          >  1:1554610/1‑99 (MQ=255)
                  gggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCt                                                                                        >  2:8197329/1‑101 (MQ=255)
                  gggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCt                                                                                        <  2:7960776/101‑1 (MQ=255)
                  gggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCt                                                                                        >  1:3706997/1‑101 (MQ=255)
                  gggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTACGCAAGCGGGACAGAGGCCt                                                                                        <  1:96982/101‑1 (MQ=255)
                     tGAGCGCGGTTTCGGGCGGATCAGGAAAGGCCCCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.gcg                                                                                    <  2:206103/101‑1 (MQ=255)
                          gcgGTTTCGGGCGGATCAGGAAAGGCCCCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCg                                                                               <  1:2261369/101‑1 (MQ=255)
                          gcgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCg                                                                               <  1:8868964/101‑1 (MQ=255)
                          gcgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCg                                                                               <  2:7494751/101‑1 (MQ=255)
                           cgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGc                                                                              >  1:1944100/1‑101 (MQ=255)
                           cgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGc                                                                              >  2:1468233/1‑101 (MQ=255)
                            ggTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGcc                                                                             >  2:741534/1‑101 (MQ=255)
                             gTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGccc                                                                            >  1:7737721/1‑101 (MQ=255)
                             gTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCACAAGCGGGACAGAGGCCT.GCGCTCCGccc                                                                            >  1:5800849/1‑101 (MQ=255)
                              tttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGcccc                                                                           >  2:7617770/1‑101 (MQ=255)
                               ttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCcg                                                                          <  1:3772116/101‑1 (MQ=255)
                               ttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCcg                                                                          <  1:2884974/101‑1 (MQ=255)
                                  gggCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGCCACAGAGGCCT.GCCCTCCGCCCccgcg                                                                       >  1:2538028/1‑101 (MQ=17)
                                       gATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGcgcg                                                                  >  1:3345692/1‑101 (MQ=255)
                                        aTCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGa                                                                 >  1:7555533/1‑101 (MQ=255)
                                        aTCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGa                                                                 >  1:8951142/1‑101 (MQ=255)
                                          cAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGcgcgcag                                                               >  2:375005/1‑98 (MQ=255)
                                          cAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAAt                                                               >  1:7964780/1‑101 (MQ=255)
                                           aGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATg                                                              <  1:2162635/101‑1 (MQ=255)
                                           aGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATg                                                              >  1:1135787/1‑101 (MQ=255)
                                            ggAACGGCACCGCCTTCCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATgc                                                             <  2:1605199/101‑1 (MQ=255)
                                            ggAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATgc                                                             <  1:446609/101‑1 (MQ=255)
                                               aaGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGcgcc                                                          >  2:5009783/1‑101 (MQ=255)
                                               aaGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGcgcc                                                          >  1:1986580/1‑101 (MQ=255)
                                                aGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGcgccc                                                         <  1:6182604/101‑1 (MQ=255)
                                                     ccGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ac                                                   >  1:1093688/1‑100 (MQ=255)
                                                      cGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATg                                                  >  2:6792567/1‑101 (MQ=255)
                                                       gCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgg                                                 >  1:2766482/1‑101 (MQ=255)
                                                        ccTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATggg                                                >  2:7771714/1‑101 (MQ=255)
                                                         ttttCCCCGCCCGTGTCGCGACAG.CGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCA.ACGCCCAGCCCCGGCGGCGCGAAAAGGCCCGCC.ACgggg                                               >  1:8914799/2‑100 (MQ=25)
                                                         cTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGCATGCGCCCGCC.ATgggc                                               >  2:3935536/1‑101 (MQ=255)
                                                         cTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc                                               >  2:8315422/1‑101 (MQ=255)
                                                           ttCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGATGCCT.TCGATCCGCCCCGGCGGCGCCAATCCACCCCCC.ACgggc.gg                                            >  2:602433/1‑101 (MQ=18)
                                                           ttCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc.gg                                            >  2:9189268/1‑101 (MQ=255)
                                                           ttCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc.gg                                            >  2:4581688/1‑101 (MQ=255)
                                                           ttCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCCCCGCCCCGGCGGCGCGAATACGGCCGCC.ATgggc.gg                                            >  2:8653236/1‑101 (MQ=255)
                                                            tCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc.ggg                                           >  2:4042594/1‑101 (MQ=255)
                                                             ccccGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGAGCGAATGCGCCCGCC.ATgggc.gggg                                          >  2:6647861/1‑101 (MQ=255)
                                                              cccgcccgTACCGCAACAGCCGCGGC.ATGCCCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc.ggggc                                         <  2:1944040/101‑1 (MQ=255)
                                                                 gcccgTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGgc.ggggcggg                                      >  1:5386774/1‑101 (MQ=255)
                                                                 gcccgTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGgc.ggggcggg                                      >  2:1152884/1‑101 (MQ=255)
                                                                 gcccgTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGgc.ggggcggg                                      >  1:3839896/1‑101 (MQ=255)
                                                                  ccggtctCGCAACGGCCGCGTC.ATGCCCGTTCCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.Ggggcgggc                                     <  2:2467079/95‑1 (MQ=18)
                                                                    cgTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGgcgc                                   >  2:4303201/1‑101 (MQ=255)
                                                                    cgTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGgcgc                                   >  1:4676692/1‑101 (MQ=255)
                                                                     gTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCa                                  >  2:5643384/1‑101 (MQ=255)
                                                                     gTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCa                                  >  2:3560347/1‑101 (MQ=255)
                                                                      tATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGgggccg                                 >  2:3311310/1‑99 (MQ=255)
                                                                      tATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAg                                 >  1:1688472/1‑101 (MQ=255)
                                                                       aTCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGgc.ggggcggggggcgg                                >  1:2613848/1‑95 (MQ=255)
                                                                       aTCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCCCCCCCGCGGCGCGAATGCGCCCGCC.CTGGGG.GGGGGGGGGGCGgg                                >  1:7350631/1‑101 (MQ=18)
                                                                        tCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCAGGc                               >  1:5238965/1‑101 (MQ=255)
                                                                          gCAACAGCCGCGGC.ATGCCCGTTTCCGCAAGGGGGACAGAGGCCG.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCg                             <  1:3401896/101‑1 (MQ=255)
                                                                           cAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCCGGccca                            >  2:1526620/1‑99 (MQ=255)
                                                                           cAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCCGGGCgg                            >  1:1312317/1‑100 (MQ=255)
                                                                            aacccccGCGGC.ATGCCCGTTCCCGCAGGCGGGACAGAGGCCT.GCGCCCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAg                           <  1:8315785/96‑1 (MQ=14)
                                                                            aaCAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGGCGAg                           >  2:1257974/1‑101 (MQ=255)
                                                                             cccgCCGCGGC.AGGTCGGTTCCCGCAGGGGGGATAG.GGCCTCCCCCTCCGCCCCGGCGGCGCAAAGGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAgg                          <  1:715612/98‑1 (MQ=2)
                                                                              cAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCCGGGCGGggg                         >  1:3999317/1‑101 (MQ=21)
                                                                                 ctgcgGC.AGGACCGCATCCCCAAGCAAGGCAGAAGACA.GCGTCCCGCCCCGGCGGCGCGGAAGCGCCCGCC.ATGGGC.GGGGCGGGCGGGGGGCGAGGGcgt                      >  2:4476658/3‑99 (MQ=18)
                                                                                   tgtgccaagACCGTTTCCCCAAGCACGACAGAGGCCT.GCGCCCAGCCCCGGCGGCGCGAATGCGCCCCCCGATGGG..GGGGCGGGGGGCGGGCGGGGGc.cct                    >  2:3470959/9‑99 (MQ=18)
                                                                                   gcgGC.GTGACCGTTCCCGCGGGCGGGACGGCGGCCT.GCCCTCCGCCGCGGGGGAGCAAGTGCTCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.Cttt                   <  2:2537955/101‑1 (MQ=12)
                                                                                    gccgcgtGACAGTTCCCGCAGGCGGCACCGCGGCTG.GGCCTCCGCCCCGGGGGAGGAAATGCCCCGGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.Cttt                   <  2:7123735/95‑1 (MQ=2)
                                                                                    cgGC.ATGCCCGTTTCCGCAGGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTg                  <  1:3052302/101‑1 (MQ=255)
                                                                                     ggC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCCGGGCGCGGGCGCTTTg                  >  2:1847925/1‑101 (MQ=18)
                                                                                     ggC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CCTTgg                 >  1:1457351/1‑101 (MQ=255)
                                                                                       c.ATGACCGTTTCCGCAAGCGGGACAGGGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTgggg               <  1:8005610/101‑1 (MQ=255)
                                                                                         aTGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.CTGGGC.GGGGCGGGGGCCGGCCTGGGGC.CCTTggggg              >  2:5421539/1‑100 (MQ=17)
                                                                                          tgcccGTTTCCGCAAGCGGGACGGGGCCCC.GCCCCCCGCCCGGGCGGCGCGAAGGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGcc             <  1:5815314/98‑1 (MQ=14)
                                                                                           gccctttcccGCAGGCGGGACAGAGGCCT.GCGCTCCCCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGccc            <  2:8940739/93‑1 (MQ=14)
                                                                                           gACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCCGGCCGAGGGG.CTTTGGGGgcc            >  1:9161316/1‑101 (MQ=255)
                                                                                           gACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGGGGGG.CTTTGGGGgcc            >  2:8836229/1‑101 (MQ=255)
                                                                                           gACCGTTTCCCCAAGCACGACAGAGGCCT.GCGCCCCGCCCCCGCGGGGCGGATGCGCCCGCC.GCCGGCGGGGGGGGGGGGGGGGGGGGGGC.CTTTGGGGcc             >  1:5007827/1‑101 (MQ=9)
                                                                                           cccggTTCCCGCAGGGGGGAC.GGGGCCTGGCGCCCCGCCCGGGCGGCGCGAATGCCCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGccc            <  1:6728381/97‑1 (MQ=11)
                                                                                              cGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCAGGCCGCGGGC.CTTTTGGGGCCTcg         >  2:4192539/1‑101 (MQ=17)
                                                                                               gTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCAGGCCCAGGGG.CTTTTGGGGCCCcgg        >  2:7290011/1‑101 (MQ=17)
                                                                                                  tCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCCGGCCGAGGGC.CCTTGGGGGCCTcggcgg     >  1:6082901/1‑101 (MQ=255)
                                                                                                   ccGCAGGCGGGACAGAGGCCT.GCGCCCCCCCCCGGCGGCGCGAAGGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGCCCTCGGCGGt    <  1:5436620/101‑1 (MQ=14)
                                                                                                   ccGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGGCCTcggcggg    >  2:3076979/1‑100 (MQ=255)
                                                                                                     gCAGGCGGGACGGAGGCCT.GCGCCCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGCCCTCGGCGGTCa  <  2:2191576/101‑1 (MQ=255)
                                                                                                     gCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGG.CTTTGGGGGCCTCGGCGGGCa  >  2:6397896/1‑101 (MQ=255)
                                                                                                     |                                                                                                        
CCGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGCCCTCGGCGGTCA  >  NC_014034/1787252‑1787452

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG