Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 1,787,352 | G→C | 2.0% | intergenic (+77/+150) | RCAP_rcc01649 → / ← RCAP_rcc01650 | ABC transporter ATP‑binding protein/ABC transporter permease |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 1,787,352 | 0 | G→C | 2.0% | 5.3 ‑1.7 ‑0.1 | 297 | intergenic (+77/+150) | RCAP_rcc01649/RCAP_rcc01650 | ABC transporter ATP‑binding protein/ABC transporter permease |
Reads supporting (aligned to +/- strand): new base (6/0): ref base (202/88): total (209/88) | ||||||||||
Fisher's exact test strand distribution p-value = 1.84e-01 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.08e-01 |
Only 100 of 359 total aligned reads displayed.
CCGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGCCCTCGGCGGTCA > NC_014034/1787252‑1787452
|
ccGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCg > 1:4582903/1‑101 (MQ=255)
cGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGc > 1:230743/1‑101 (MQ=255)
gcgGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGc > 2:2884876/1‑101 (MQ=255)
cgGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCg < 1:6347356/101‑1 (MQ=255)
gCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCggg < 2:8504098/101‑1 (MQ=255)
tGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGAc < 2:9094125/101‑1 (MQ=255)
tGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGAc < 1:4158352/101‑1 (MQ=255)
gAGCGAGGGGTGAGCGCGTTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACa < 2:590693/101‑1 (MQ=255)
aGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACag < 1:623197/101‑1 (MQ=255)
gCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACaga < 2:235576/101‑1 (MQ=255)
cGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagag > 1:8477919/1‑101 (MQ=255)
cGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagag < 1:1244402/101‑1 (MQ=255)
cGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagag < 1:6617115/101‑1 (MQ=255)
gAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAgg > 1:859531/1‑101 (MQ=255)
aGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACagagag > 1:1554610/1‑99 (MQ=255)
gggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCt > 2:8197329/1‑101 (MQ=255)
gggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCt < 2:7960776/101‑1 (MQ=255)
gggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCt > 1:3706997/1‑101 (MQ=255)
gggTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTACGCAAGCGGGACAGAGGCCt < 1:96982/101‑1 (MQ=255)
tGAGCGCGGTTTCGGGCGGATCAGGAAAGGCCCCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.gcg < 2:206103/101‑1 (MQ=255)
gcgGTTTCGGGCGGATCAGGAAAGGCCCCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCg < 1:2261369/101‑1 (MQ=255)
gcgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCg < 1:8868964/101‑1 (MQ=255)
gcgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCg < 2:7494751/101‑1 (MQ=255)
cgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGc > 1:1944100/1‑101 (MQ=255)
cgGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGc > 2:1468233/1‑101 (MQ=255)
ggTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGcc > 2:741534/1‑101 (MQ=255)
gTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGccc > 1:7737721/1‑101 (MQ=255)
gTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCACAAGCGGGACAGAGGCCT.GCGCTCCGccc > 1:5800849/1‑101 (MQ=255)
tttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGcccc > 2:7617770/1‑101 (MQ=255)
ttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCcg < 1:3772116/101‑1 (MQ=255)
ttCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCcg < 1:2884974/101‑1 (MQ=255)
gggCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGCCACAGAGGCCT.GCCCTCCGCCCccgcg > 1:2538028/1‑101 (MQ=17)
gATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGcgcg > 1:3345692/1‑101 (MQ=255)
aTCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGa > 1:7555533/1‑101 (MQ=255)
aTCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGa > 1:8951142/1‑101 (MQ=255)
cAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGcgcgcag > 2:375005/1‑98 (MQ=255)
cAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAAt > 1:7964780/1‑101 (MQ=255)
aGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATg < 1:2162635/101‑1 (MQ=255)
aGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATg > 1:1135787/1‑101 (MQ=255)
ggAACGGCACCGCCTTCCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATgc < 2:1605199/101‑1 (MQ=255)
ggAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATgc < 1:446609/101‑1 (MQ=255)
aaGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGcgcc > 2:5009783/1‑101 (MQ=255)
aaGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGcgcc > 1:1986580/1‑101 (MQ=255)
aGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGcgccc < 1:6182604/101‑1 (MQ=255)
ccGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ac > 1:1093688/1‑100 (MQ=255)
cGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATg > 2:6792567/1‑101 (MQ=255)
gCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgg > 1:2766482/1‑101 (MQ=255)
ccTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATggg > 2:7771714/1‑101 (MQ=255)
ttttCCCCGCCCGTGTCGCGACAG.CGTTGCAAAGACCGCATCCCCAAGCGCGCGAGAGGCCA.ACGCCCAGCCCCGGCGGCGCGAAAAGGCCCGCC.ACgggg > 1:8914799/2‑100 (MQ=25)
cTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGCATGCGCCCGCC.ATgggc > 2:3935536/1‑101 (MQ=255)
cTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc > 2:8315422/1‑101 (MQ=255)
ttCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGATGCCT.TCGATCCGCCCCGGCGGCGCCAATCCACCCCCC.ACgggc.gg > 2:602433/1‑101 (MQ=18)
ttCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc.gg > 2:9189268/1‑101 (MQ=255)
ttCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc.gg > 2:4581688/1‑101 (MQ=255)
ttCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCCCCGCCCCGGCGGCGCGAATACGGCCGCC.ATgggc.gg > 2:8653236/1‑101 (MQ=255)
tCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc.ggg > 2:4042594/1‑101 (MQ=255)
ccccGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGAGCGAATGCGCCCGCC.ATgggc.gggg > 2:6647861/1‑101 (MQ=255)
cccgcccgTACCGCAACAGCCGCGGC.ATGCCCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATgggc.ggggc < 2:1944040/101‑1 (MQ=255)
gcccgTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGgc.ggggcggg > 1:5386774/1‑101 (MQ=255)
gcccgTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGgc.ggggcggg > 2:1152884/1‑101 (MQ=255)
gcccgTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGgc.ggggcggg > 1:3839896/1‑101 (MQ=255)
ccggtctCGCAACGGCCGCGTC.ATGCCCGTTCCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.Ggggcgggc < 2:2467079/95‑1 (MQ=18)
cgTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGgcgc > 2:4303201/1‑101 (MQ=255)
cgTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGgcgc > 1:4676692/1‑101 (MQ=255)
gTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCa > 2:5643384/1‑101 (MQ=255)
gTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCa > 2:3560347/1‑101 (MQ=255)
tATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGgggccg > 2:3311310/1‑99 (MQ=255)
tATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAg > 1:1688472/1‑101 (MQ=255)
aTCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGgc.ggggcggggggcgg > 1:2613848/1‑95 (MQ=255)
aTCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCCCCCCCGCGGCGCGAATGCGCCCGCC.CTGGGG.GGGGGGGGGGCGgg > 1:7350631/1‑101 (MQ=18)
tCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCAGGc > 1:5238965/1‑101 (MQ=255)
gCAACAGCCGCGGC.ATGCCCGTTTCCGCAAGGGGGACAGAGGCCG.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCg < 1:3401896/101‑1 (MQ=255)
cAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCCGGccca > 2:1526620/1‑99 (MQ=255)
cAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCCGGGCgg > 1:1312317/1‑100 (MQ=255)
aacccccGCGGC.ATGCCCGTTCCCGCAGGCGGGACAGAGGCCT.GCGCCCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAg < 1:8315785/96‑1 (MQ=14)
aaCAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGGCGAg > 2:1257974/1‑101 (MQ=255)
cccgCCGCGGC.AGGTCGGTTCCCGCAGGGGGGATAG.GGCCTCCCCCTCCGCCCCGGCGGCGCAAAGGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAgg < 1:715612/98‑1 (MQ=2)
cAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCCGGGCGGggg > 1:3999317/1‑101 (MQ=21)
ctgcgGC.AGGACCGCATCCCCAAGCAAGGCAGAAGACA.GCGTCCCGCCCCGGCGGCGCGGAAGCGCCCGCC.ATGGGC.GGGGCGGGCGGGGGGCGAGGGcgt > 2:4476658/3‑99 (MQ=18)
tgtgccaagACCGTTTCCCCAAGCACGACAGAGGCCT.GCGCCCAGCCCCGGCGGCGCGAATGCGCCCCCCGATGGG..GGGGCGGGGGGCGGGCGGGGGc.cct > 2:3470959/9‑99 (MQ=18)
gcgGC.GTGACCGTTCCCGCGGGCGGGACGGCGGCCT.GCCCTCCGCCGCGGGGGAGCAAGTGCTCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.Cttt < 2:2537955/101‑1 (MQ=12)
gccgcgtGACAGTTCCCGCAGGCGGCACCGCGGCTG.GGCCTCCGCCCCGGGGGAGGAAATGCCCCGGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.Cttt < 2:7123735/95‑1 (MQ=2)
cgGC.ATGCCCGTTTCCGCAGGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTg < 1:3052302/101‑1 (MQ=255)
ggC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCCGGGCGCGGGCGCTTTg > 2:1847925/1‑101 (MQ=18)
ggC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CCTTgg > 1:1457351/1‑101 (MQ=255)
c.ATGACCGTTTCCGCAAGCGGGACAGGGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTgggg < 1:8005610/101‑1 (MQ=255)
aTGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.CTGGGC.GGGGCGGGGGCCGGCCTGGGGC.CCTTggggg > 2:5421539/1‑100 (MQ=17)
tgcccGTTTCCGCAAGCGGGACGGGGCCCC.GCCCCCCGCCCGGGCGGCGCGAAGGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGcc < 1:5815314/98‑1 (MQ=14)
gccctttcccGCAGGCGGGACAGAGGCCT.GCGCTCCCCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGccc < 2:8940739/93‑1 (MQ=14)
gACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCCGGCCGAGGGG.CTTTGGGGgcc > 1:9161316/1‑101 (MQ=255)
gACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGGGGGG.CTTTGGGGgcc > 2:8836229/1‑101 (MQ=255)
gACCGTTTCCCCAAGCACGACAGAGGCCT.GCGCCCCGCCCCCGCGGGGCGGATGCGCCCGCC.GCCGGCGGGGGGGGGGGGGGGGGGGGGGC.CTTTGGGGcc > 1:5007827/1‑101 (MQ=9)
cccggTTCCCGCAGGGGGGAC.GGGGCCTGGCGCCCCGCCCGGGCGGCGCGAATGCCCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGccc < 1:6728381/97‑1 (MQ=11)
cGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCAGGCCGCGGGC.CTTTTGGGGCCTcg > 2:4192539/1‑101 (MQ=17)
gTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGGGCAGGCCCAGGGG.CTTTTGGGGCCCcgg > 2:7290011/1‑101 (MQ=17)
tCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCCGGCCGAGGGC.CCTTGGGGGCCTcggcgg > 1:6082901/1‑101 (MQ=255)
ccGCAGGCGGGACAGAGGCCT.GCGCCCCCCCCCGGCGGCGCGAAGGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGCCCTCGGCGGt < 1:5436620/101‑1 (MQ=14)
ccGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGGCCTcggcggg > 2:3076979/1‑100 (MQ=255)
gCAGGCGGGACGGAGGCCT.GCGCCCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGCCCTCGGCGGTCa < 2:2191576/101‑1 (MQ=255)
gCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGG.CTTTGGGGGCCTCGGCGGGCa > 2:6397896/1‑101 (MQ=255)
|
CCGGCGCGGCTGAGCGAGGGGTGAGCGCGGTTTCGGGCGGATCAGGAAAGGCACCGCCTTTCCCCGCCCGTATCGCAACAGCCGCGGC.ATGACCGTTTCCGCAAGCGGGACAGAGGCCT.GCGCTCCGCCCCGGCGGCGCGAATGCGCCCGCC.ATGGGC.GGGGCGGGCGCAGGCCGAGGGC.CTTTGGGGCCCTCGGCGGTCA > NC_014034/1787252‑1787452
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|