| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,380 | A→G | 2.4% | intergenic (‑176/‑129) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,380 | 0 | A→G | 2.4% | 13.4 ‑1.5 ‑1.3 | 453 | intergenic (‑176/‑129) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (8/3): ref base (226/216): total (234/219) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.24e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.09e-02 | ||||||||||
Only 100 of 509 total aligned reads displayed.
GCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.CC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATC > NC_014034/2249280‑2249479
|
ccccgGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCG.AAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag < 1:3658952/100‑1 (MQ=255)
cccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCaga > 1:7602815/2‑101 (MQ=255)
ccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCagag < 2:5535179/101‑1 (MQ=255)
cccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgg < 1:1521022/101‑1 (MQ=255)
ccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggg < 1:3531674/101‑1 (MQ=255)
gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg > 2:9158144/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg < 1:4053185/101‑1 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.c > 1:1388815/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg < 2:8502363/101‑1 (MQ=255)
tGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGG.CAgcg > 2:3533680/1‑101 (MQ=255)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGG.c < 2:6110797/96‑1 (MQ=18)
caagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGG.c > 2:6516338/6‑101 (MQ=18)
aagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggggg > 2:7429631/5‑99 (MQ=18)
cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c < 1:7664704/101‑1 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c.c < 2:1435021/101‑1 (MQ=255)
gACT.CCCCCGGGATATTTGACGCAAGATGAN...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c.ccc < 1:7209702/101‑2 (MQ=255)
actccccccGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGG.CAGCG.cc.c < 1:1177201/97‑1 (MQ=17)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c.cccttc > 1:94288/1‑97 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c.cccttc < 2:108225/101‑5 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTGGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.cc.c.cccttc < 2:1735425/101‑5 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGTG..TCCTTTCATCTTGCCGAAAATATCCCAGGCGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTcgc < 2:7325280/101‑1 (MQ=21)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTcgc < 1:8837916/101‑1 (MQ=255)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAGCG.CC.C.CCtgc > 2:8121891/1‑99 (MQ=2)
cccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTCTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGTGGGG.CAGCGCCC.C.CCTTcgcg > 1:6446734/1‑101 (MQ=25)
ccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCgcgg > 1:7989119/1‑101 (MQ=255)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGggcggc > 2:3121539/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGcc > 2:3705213/1‑101 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGcc > 1:201674/1‑101 (MQ=255)
atTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCcg > 2:4167831/1‑101 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGa < 1:7902126/101‑1 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGa > 2:6930111/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..GTCTTTCATCTTGCCGAAAATATCGCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGAc < 2:9023061/101‑1 (MQ=37)
gAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGAc < 2:5682043/101‑1 (MQ=255)
gAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGAc < 2:2203705/101‑1 (MQ=255)
gAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGAc > 2:4908152/1‑101 (MQ=255)
gCAAGATGAA...GGGG..GTCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGAcgcg < 2:2026013/101‑1 (MQ=255)
cAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGAcgcgc > 1:3376280/1‑101 (MQ=255)
aaGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGGcgcgcg > 2:6260781/1‑101 (MQ=255)
aaGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGCcgcgcg > 1:2233317/1‑101 (MQ=255)
aTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGcgccg > 2:5111174/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:8915125/101‑1 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCa > 1:6942826/1‑101 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCa > 2:7758247/1‑101 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:8296706/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 2:4716052/101‑1 (MQ=255)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 1:2566544/1‑101 (MQ=255)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg < 2:2704485/101‑1 (MQ=255)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg < 2:7194864/101‑1 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAggc > 1:5012030/1‑100 (MQ=255)
g..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGAAGCGCGCCGCAACAggc > 1:8282087/1‑100 (MQ=255)
ggCGTTCATCTGCCCGAAAATATCGCGGGGGGTGAA.TGGCGCA..GCGAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc < 2:1852102/101‑1 (MQ=37)
cTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGt < 2:2398581/101‑1 (MQ=255)
tttCATGTTGCCGAAAGTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 2:7624217/101‑1 (MQ=37)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 2:46374/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg < 2:2085355/101‑1 (MQ=255)
ttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGc > 1:470451/1‑101 (MQ=255)
aTCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcccc > 2:5970751/1‑101 (MQ=255)
tCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGGCGTGCCCCt > 1:6734588/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:1207273/1‑101 (MQ=255)
cTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCtt > 2:3901468/1‑101 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 1:9108057/101‑1 (MQ=255)
gCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGt < 1:6010541/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCTTGCCCCTTTGTc < 1:6630177/101‑1 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGCGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc > 2:545694/1‑101 (MQ=255)
cGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCa > 2:6984678/1‑101 (MQ=255)
aaaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAtt < 1:7425348/101‑1 (MQ=255)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGGAGGGCG.CC.C.CTTCCGCGGG.GGGCGCGACGCGCGCCGCAACAGGTCCGGCCCCTTTGTCAttttt > 2:4449441/1‑98 (MQ=25)
aaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCt < 1:168561/101‑1 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.CC.CACCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGGGCCCCTTTGTCATTGTg > 1:4225264/1‑101 (MQ=38)
atatCCCGGGGGGTGAA.TGGCGAA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGACGTGCCCCTTTGTCATTCTg > 2:1300017/1‑101 (MQ=38)
atagCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTg < 1:7729471/101‑1 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 2:2864885/101‑1 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 2:4768171/1‑101 (MQ=255)
cccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGGCGc > 1:2953672/1‑101 (MQ=255)
ggggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc < 1:3820811/101‑1 (MQ=255)
ggggggTGAA.GGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAcc < 1:3222386/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 1:5520198/1‑101 (MQ=255)
gtgTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 2:5871198/99‑1 (MQ=255)
ggTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 2:1523736/101‑1 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt < 1:8624604/101‑1 (MQ=255)
gTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGt < 2:6665599/101‑1 (MQ=255)
ttggactgcgcA..TCGAGCGGGAGG.GAGCG.CCGC.TCGTCGGTGGGGGCCGGGAGGCGCGCCGCAACAGGTCGTTCCCCTTTTTCAATCTGTCGCGCCCATGt < 2:7961388/94‑1 (MQ=255)
gAA.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa > 1:4823683/1‑101 (MQ=255)
atctGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCa < 2:5295001/98‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:5397756/101‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 2:6597307/101‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa > 1:5697934/1‑101 (MQ=255)
agggCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:6240183/99‑1 (MQ=255)
tGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa > 1:4361087/1‑101 (MQ=255)
tGGCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATaa < 1:6282056/101‑1 (MQ=255)
ggCGCA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCaagat > 1:5295185/1‑97 (MQ=255)
cgcA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCt < 2:2604963/101‑1 (MQ=255)
gcA..GCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAgaga > 1:2346513/1‑98 (MQ=255)
gCCAGAGGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGcc < 1:3142289/101‑1 (MQ=255)
agagGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 2:8654391/1‑101 (MQ=255)
agagGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 1:1882767/1‑101 (MQ=255)
agagGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCa > 1:8482025/1‑101 (MQ=255)
gagGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCAt > 1:2849322/1‑101 (MQ=255)
agGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc > 1:1024218/1‑101 (MQ=255)
agGGGGG.CAGCGCCC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATc < 2:3333783/101‑1 (MQ=255)
|
GCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAGCG.CC.C.CCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATAAGCTGGCCGCATC > NC_014034/2249280‑2249479
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|