BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,330,178	G→C	100%	intergenic (+153/+159)	RCAP_rcc02161 → / ← mrcA	hypothetical protein/penicillin‑binding protein 1A

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,330,178	0	G→C	100.0%	311.9	138	intergenic (+153/+159)	RCAP_rcc02161/mrcA	hypothetical protein/penicillin‑binding protein 1A
Reads supporting (aligned to +/- strand): new base (48/88): ref base (1/0): total (49/89)

Only 100 of 183 total aligned reads displayed.


CTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......CGG....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGG  >  NC_014034/2330078‑2330246


gttGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggg                                                                          <  2:8223328/100‑1 (MQ=255)


cTTGTCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggg                                                                          <  2:2397268/101‑1 (MQ=255)


cTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggg                                                                          <  1:6937821/101‑1 (MQ=255)


cTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggg                                                                          >  2:331285/1‑101 (MQ=255)


  tGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggc                                                                        <  2:411591/101‑3 (MQ=255)


  tGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGCC....G.......Cgggg                                                                        >  1:7759315/1‑99 (MQ=255)


   ggCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Gggggg                                                                       >  1:4350971/1‑98 (MQ=255)


   ggCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Gggggg                                                                       >  1:8501442/1‑98 (MQ=255)


   ggCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggct                                                                       <  1:8159284/101‑4 (MQ=255)


   ggCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggct                                                                       <  1:44964/101‑4 (MQ=255)


    gCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctc                                                                      <  2:8853512/101‑5 (MQ=255)


    gCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctc                                                                      <  2:7075133/101‑5 (MQ=255)


     ccTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctcc                                                                     <  1:7270785/101‑6 (MQ=255)


     ccTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctcc                                                                     <  1:9024108/101‑6 (MQ=255)


      cTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctccg                                                                    <  2:6472398/101‑7 (MQ=255)


        ccGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctccgcc                                                                  <  1:9048058/101‑9 (MQ=255)


        ccGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctccgcc                                                                  <  1:2389370/101‑9 (MQ=255)


        ccGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggcgccccc                                                                  >  1:4104406/1‑93 (MQ=255)


         cGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctccgccc                                                                 <  2:3628182/101‑10 (MQ=38)


          gCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......Ggggctccgcccc                                                                <  2:6895057/101‑11 (MQ=37)


            cAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCCGGCG...G.......GGG....CTCCGCCcccc                                                           >  2:7866671/1‑101 (MQ=37)


                              gcAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTgc                                               >  1:9107623/1‑101 (MQ=18)


                                agagCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGGTCCGC....CCCCGCACCCCCGGCGTATTTgcgc                                             >  1:7394452/1‑101 (MQ=21)


                                     gccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGa                                        <  1:8961108/101‑1 (MQ=18)


                                      ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                       <  1:487212/101‑1 (MQ=18)


                                      ccgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaa                                       <  2:2919808/101‑1 (MQ=18)


                                       cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                      <  1:6906482/101‑1 (MQ=18)


                                       cgcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaa                                      <  1:7900413/101‑1 (MQ=18)


                                        gcACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaaa                                     <  2:3657707/101‑1 (MQ=18)


                                         cACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaaaa                                    <  1:6726000/101‑1 (MQ=17)


                                         cACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGaaaaa                                    <  1:2247517/101‑1 (MQ=17)


                                            ggATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGGCAAAGcc                                 >  2:1600435/1‑101 (MQ=12)


                                            ggATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAgac                                 >  2:4484856/1‑99 (MQ=17)


                                             gATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCCCCCCCGGCGGATTTGCGCCGACAAAAAGCCg                                >  1:1965546/1‑101 (MQ=12)


                                             gATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCg                                >  2:1456266/1‑101 (MQ=17)


                                             gATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCg                                >  2:2056584/1‑101 (MQ=17)


                                              aTCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCgg                               >  1:8232122/1‑101 (MQ=17)


                                               tCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCggg                              <  1:8533187/101‑1 (MQ=18)


                                                cGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCgggg                             <  2:1048231/101‑1 (MQ=17)


                                                cGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCgggg                             <  1:3198045/101‑1 (MQ=17)


                                                 ggCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgc                            <  2:3926340/101‑1 (MQ=17)


                                                 ggCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgc                            <  2:5904020/101‑1 (MQ=17)


                                                 ggCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgc                            >  2:5331860/1‑101 (MQ=17)


                                                  gCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcg                           <  1:6470358/101‑1 (MQ=17)


                                                   ccGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGG....CCCCGCACCCCCGGCGTATTTGCGGCAAGAAACAGCCGGGgcgc                          >  2:2969215/1‑101 (MQ=18)


                                                    cGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcgcg                         >  2:1664474/1‑101 (MQ=17)


                                                     gATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGgcgcgc                        >  2:1913684/1‑101 (MQ=17)


                                                      aTGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCa                       >  1:3918868/1‑101 (MQ=17)


                                                       tGGCGGAGGGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                      <  2:4858506/101‑1 (MQ=17)


                                                       tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                      <  2:6184014/101‑1 (MQ=17)


                                                       tGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                      >  1:4392142/1‑101 (MQ=17)


                                                       tGGCGGACAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCAt                      <  2:6551658/101‑1 (MQ=17)


                                                        ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCTGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                     <  1:8552192/101‑1 (MQ=17)


                                                        ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                     >  1:3389855/1‑101 (MQ=17)


                                                        ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                     <  1:75047/101‑1 (MQ=17)


                                                        ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                     <  2:7728610/101‑1 (MQ=17)


                                                        ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATg                     >  2:7147242/1‑101 (MQ=17)


                                                        ggCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCC.GGGCGCGCATGc                    <  1:2128357/101‑1 (MQ=12)


                                                         gCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGc                    <  2:87974/101‑1 (MQ=18)


                                                         gCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGc                    <  2:4350847/101‑1 (MQ=18)


                                                          cGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCg                   >  1:2702046/1‑101 (MQ=17)


                                                           ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCgg                  >  1:841438/1‑101 (MQ=17)


                                                           ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCgg                  <  1:1643072/101‑1 (MQ=17)


                                                           ggAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGGATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCgg                  >  1:5670504/1‑101 (MQ=17)


                                                            gagaGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCggg                 <  2:7301162/101‑1 (MQ=17)


                                                            gagaGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCggg                 >  1:7329465/1‑101 (MQ=17)


                                                            gagaGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCggg                 <  1:4772151/101‑1 (MQ=18)


                                                             agagGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGGTCCGC....CCCCCCAACCCCCGCGGATTTGCGCCAAAAAAAAGCCGGGGCGCGCATGCgggg                >  1:2514825/1‑101 (MQ=12)


                                                             agagGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCgggg                <  1:7058441/101‑1 (MQ=18)


                                                               agGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcc              <  1:3932401/101‑1 (MQ=17)


                                                               agGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcc              >  1:2722917/1‑101 (MQ=17)


                                                               agGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcc              >  2:8635043/1‑101 (MQ=17)


                                                                ggAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGccc             >  2:1305602/1‑101 (MQ=17)


                                                                 gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcccc            <  2:6658794/101‑1 (MQ=17)


                                                                 gAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcccc            <  1:1224810/101‑1 (MQ=17)


                                                                 gAAGTTCGCCGCGCAGGCGCGGCGCCCCGGGCTGGGGCTC....CGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGcccc            <  1:6262510/101‑1 (MQ=12)


                                                                  aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCg           <  2:5670297/101‑1 (MQ=17)


                                                                  aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCg           <  2:9046953/101‑1 (MQ=17)


                                                                  aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCg           >  1:5072806/1‑101 (MQ=17)


                                                                  aaTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCg           <  1:5536594/101‑1 (MQ=17)


                                                                   aTTTCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCgg          <  2:2193900/101‑1 (MQ=17)


                                                                    tttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGa         <  1:1056804/101‑1 (MQ=17)


                                                                    tttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGa         <  2:7789679/101‑1 (MQ=17)


                                                                    tttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGa         >  2:5433419/1‑101 (MQ=17)


                                                                    tttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGa         >  2:3474851/1‑101 (MQ=17)


                                                                     ttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGAt        <  2:524250/101‑1 (MQ=18)


                                                                     ttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCACGCGGGGTCCCGGac        >  1:5967520/1‑100 (MQ=9)


                                                                     ttCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGA....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGAt        <  1:7531668/101‑1 (MQ=21)


                                                                      tCGCCGCGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATc       <  1:1279434/101‑1 (MQ=18)


                                                                       cgccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCa      >  1:2282638/1‑101 (MQ=18)


                                                                       cgccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCa      <  2:1541612/101‑1 (MQ=18)


                                                                        gccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCAc     <  2:594405/101‑1 (MQ=18)


                                                                        gccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCAc     <  2:7144813/101‑1 (MQ=18)


                                                                        gccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCAc     <  1:186455/101‑1 (MQ=18)


                                                                         ccgcGCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCAcc    <  2:1410211/101‑1 (MQ=18)


                                                                          cgcgCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCCCcg   >  1:2778332/1‑101 (MQ=17)


                                                                          cgcgCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACcg   <  1:2854385/101‑1 (MQ=18)


                                                                          cgcgCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACcg   <  2:8257996/101‑1 (MQ=18)


                                                                          cgcgCAGGCGCGGCGACCCGGGC....GGGGGCTCCGC....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACcg   <  2:7126351/101‑1 (MQ=18)


                                                                           gcgcAGGCGCGGCGACCCGGGCGGG.G.......CGGCCCCCCCCGCACCCCCCGCGGATTTTGGCCAAGAAAAAGGCGGGGGGCGCACGGGGGGGCCCggcgcccccc  >  1:5927470/1‑93 (MQ=255)


CTTGGCCTCCGCCAAGGGCGGCAACGGCGCGCAGAGCGCCGCACGGATCGGCCGATGGCGGAGAGGAATTTCGCCGCGCAGGCGCGGCGACCCGGGC....G.......CGG....CCCCGCACCCCCGGCGTATTTGCGCCAAGAAAAAGCCGGGGCGCGCATGCGGGGCCCCGGATCACCGG  >  NC_014034/2330078‑2330246

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG