| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 448,780 | A→C | 2.6% | intergenic (+73/+147) | RCAP_rcc00419 → / ← pykA1 | NADH:flavin oxidoreductase/NADH oxidase/pyruvate kinase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 448,780 | 0 | A→C | 2.6% | 7.1 ‑0.3 ‑0.5 | 239 | intergenic (+73/+147) | RCAP_rcc00419/pykA1 | NADH:flavin oxidoreductase/NADH oxidase/pyruvate kinase |
| Reads supporting (aligned to +/- strand): new base (6/3): ref base (166/64): total (172/67) | ||||||||||
| Fisher's exact test strand distribution p-value = 7.13e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.42e-01 | ||||||||||
Only 100 of 337 total aligned reads displayed.
TGCGCTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCAGGCGGTCGTGCCGCAGCG > NC_014034/448680‑448879
|
tGCGCTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.Ca > 2:6331248/1‑101 (MQ=255)
gcgcTGCTGCTGATGAAGGACGTTTGACGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CAc < 2:4200173/101‑1 (MQ=255)
cgcTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACt > 2:1807816/1‑101 (MQ=255)
cgcTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACt > 2:386224/1‑101 (MQ=255)
cgcTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACt < 1:5103053/101‑1 (MQ=255)
gcTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTc < 1:1430728/101‑1 (MQ=255)
gcTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTc < 2:193297/101‑1 (MQ=255)
gcTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTc < 1:4894526/101‑1 (MQ=255)
gCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGc > 2:2192965/1‑101 (MQ=255)
gCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGc > 1:2796469/1‑101 (MQ=255)
ggCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCt < 2:2502544/101‑1 (MQ=255)
ggCTGATGAAGCACGTTTGGGGCTGACTTGGCCTCGGGCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCt < 2:7221136/101‑1 (MQ=255)
gCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTg < 2:4528502/101‑1 (MQ=255)
gCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTg < 1:3539725/101‑1 (MQ=255)
gCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTg > 1:5613063/1‑101 (MQ=255)
cTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTgc < 1:5484526/101‑1 (MQ=255)
tgatgaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTgcg > 2:3193799/1‑101 (MQ=255)
gatgaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTgcgc > 1:6828937/1‑101 (MQ=255)
gatgaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACAGCCGAGGGCCCAAA.GG.CACTCGGACTgtgc > 1:4123804/1‑101 (MQ=255)
atgaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGcgcc > 1:320951/1‑101 (MQ=255)
tgaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGcgccc < 1:8533797/101‑1 (MQ=255)
gaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGcgcccg > 2:4726896/1‑101 (MQ=255)
gaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGcgcccg > 1:8769090/1‑101 (MQ=255)
gaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGcgcccg > 1:8161203/1‑101 (MQ=255)
gaAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGcgcccg < 1:5353127/101‑1 (MQ=255)
aaGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGcgcccgc < 2:7984769/101‑1 (MQ=255)
aGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGcgcccgcc > 1:6177612/1‑101 (MQ=255)
ggACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCgcccgccc < 1:169532/101‑1 (MQ=255)
gACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGcccgcccc < 1:7797126/101‑1 (MQ=255)
gACGTTTGAGGCTGACTTGGCCCCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGcccgcccc < 1:3942766/101‑1 (MQ=255)
aCGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCCcccgccccc > 1:4036632/1‑100 (MQ=255)
gTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCccgccccgcc > 2:3397/1‑101 (MQ=255)
gTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCccgccccgcc > 1:3261969/1‑101 (MQ=255)
gTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCccgccccgcc > 2:3000802/1‑101 (MQ=255)
tttGAGGCTGACTTGGCCTCGGCCATTGCCGAGACC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCa > 1:4771494/1‑101 (MQ=255)
ttGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCAt > 2:8198017/1‑101 (MQ=255)
ttGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCAt > 1:7429062/1‑101 (MQ=255)
tggAGCCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCAt < 2:6413/99‑1 (MQ=255)
tGAGGCTGCCTTGGCCGCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGCCCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATc < 1:6648465/101‑1 (MQ=255)
tGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGGCTGGGCCCGCCCCGCCacg > 2:7346306/1‑99 (MQ=255)
tGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCCTc > 2:6722800/1‑101 (MQ=255)
tGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATc > 1:1174549/1‑101 (MQ=255)
tGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATc > 1:7508143/1‑101 (MQ=255)
gAGGCTGACTGGGCCTCGGCCATTGCCGAGGCC.AATCGCAACGGAGGTCCTGTGCCCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATcg < 2:1496331/101‑1 (MQ=255)
ggCTGCCTTGGCCTGGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CCCTCGGCCTGCGCCCGCCCCGCCATcggc < 1:6588807/101‑1 (MQ=255)
ggCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATcggc > 2:4593817/1‑101 (MQ=255)
cTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATcggcgg > 2:2822104/1‑101 (MQ=255)
gACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCggcgggg > 1:8657985/1‑100 (MQ=255)
aCTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCggcggggg > 2:3269307/1‑99 (MQ=255)
cTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGGGGTCCGGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGgcgc < 1:925937/101‑1 (MQ=255)
cTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCCGCGGgagc > 2:240165/1‑101 (MQ=255)
ttGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCggcggggcgc > 2:6949666/1‑97 (MQ=255)
ttGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGgggcg > 2:7767899/1‑100 (MQ=255)
ggCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCggcggggggggg > 1:3430373/1‑95 (MQ=255)
ggCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCggcggggccagg > 2:6619196/1‑95 (MQ=255)
ggCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGgggcgcg > 2:848053/1‑98 (MQ=255)
gCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCggcgggggggggg > 1:3571238/1‑94 (MQ=255)
gCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCggcggggggcggc > 1:4156119/1‑94 (MQ=255)
tCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCcgcggggggcgggggg > 1:421866/1‑91 (MQ=21)
ggCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGAGGCGcgcc > 2:3466739/1‑101 (MQ=255)
ccATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGCCGGCGcgccgc > 1:2347699/1‑101 (MQ=255)
cATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGGGCCCCgccgcc > 1:2478071/1‑101 (MQ=21)
cATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGCGGGGGCgccgcc > 2:6130160/1‑101 (MQ=25)
ttGCCGAGGCC.AATCGCAACAGAGGTCCTGTGCCCGCCGAGGGCCCAAG.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCgg < 2:7831143/101‑1 (MQ=255)
gcggAGGCC.AATCGCAACAGAGGTCCTGTGCCCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCgggg < 1:6900498/98‑1 (MQ=255)
ccGAGCCC.AATCGCAACAGAGGTCCTGTGCCCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGc < 1:1788178/101‑1 (MQ=255)
ccgggccaaaTCGCAACAGAGGTCCTGTGCCCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGc < 2:9053643/93‑1 (MQ=255)
cGAGGCC.AACCGAAACAGAGGTCCTGTGCCCGCGGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCg < 1:8314140/101‑1 (MQ=18)
caGGCCAAATCCCAACAGAGTTCCTGTGCCCGCCGAGGCCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCg < 2:7441184/100‑1 (MQ=17)
gggCC.AGCCGCAACAGAGGTCCTGTGCCCGCCGGGGCCCCAAA.GG.CGCTCGGCTTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGa < 2:5752030/100‑1 (MQ=14)
gggCC.AAGCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGa < 1:9109447/100‑1 (MQ=255)
agccc.AACCGCAACAGAGGTCCTGTGCCCGCCGGGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGa < 1:7857477/98‑1 (MQ=17)
aGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGCGGCGCGCCGCCGCGGCggg > 2:5978660/1‑100 (MQ=18)
ggCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGCGGGCGCCGCGCCGGGGGgggg > 1:6013307/1‑99 (MQ=18)
cc.AATCGCAACAGAGGTCCTGTGCCCGCCGAGGGCCCAAA.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAgcg < 1:7545771/101‑1 (MQ=255)
c.AATCGCAACAGAGGTCCTGTGCCCGCCGGGGGCCCAAG.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAgcgc < 1:650384/101‑1 (MQ=17)
c.AACCGCAACAGAGGTCCGGTGCCCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAgcgc < 2:2669991/101‑1 (MQ=255)
tCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGGGCCGCGCCGCCGCGGGGGGGCGCGgg > 2:4814415/1‑101 (MQ=18)
cGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGCGGCCCGCGGCCCGGGGGGGGGGCAGGc > 2:5353805/1‑101 (MQ=17)
cAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGCGGCGGGCCGGCCGGGCGGGGGGCAGGccc > 2:7087957/1‑100 (MQ=17)
acgggagGTCATGGGCCCCCCGAGGGCCTAGC.GC.CACTCGGTGTGGGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCctc < 2:1113335/97‑1 (MQ=14)
ggggttCCTGTGCCCGCCGGGGCCCCAAG.GG.CCCTCGGCCGGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCtgt < 2:5579838/96‑1 (MQ=11)
agagGCCTTGTGCCCGCCGGGGGCCCAAG.GG.CACTCGCCCGGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCtgt < 1:2151172/101‑1 (MQ=14)
ggttCCTGTGCCCG.CGGGGGCCCAAA.GGCCCCCCGGCCGGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCtgttg < 2:6289717/98‑1 (MQ=11)
ggTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGCGGCCCGCCGCCGGGGGGGGGCGCGGGCCGCcgtttt > 1:5812626/1‑99 (MQ=14)
gcctgttgcccgccgAGGGCCCAAA.GG.CCCTCGCCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCTGTtgtg < 2:8314043/92‑1 (MQ=11)
ccggggcccgcggAGGGCCCAAG.GC.CCCTCGGCCTGCCCCCGCCCCGCCATCGGCGGGCGCAGTCGAGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCt < 1:1990043/94‑1 (MQ=11)
cTGGGACCGCCGAGGGCCCAAG.GG.CCCTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGTGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCtt < 2:1655751/101‑1 (MQ=11)
gcccgcggGGGGCCAAAG.GG.CACCCGCCCGGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTgggg < 1:104812/99‑1 (MQ=14)
gACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGGCGGCGCGCCCCCCGGGCGGGGGGCGGGCCTCTGTTGTGCTTgtgg > 2:4056251/1‑101 (MQ=14)
ccggccgA.GGCCCAAA.GGCCCCCCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGc < 2:866460/98‑1 (MQ=11)
ccgccgAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGCAGGCGCGCCGCCCGGGGGGGGCGCCGGGCGCTGTTGTGCTTgtgggg > 2:5654617/1‑99 (MQ=14)
cccgcgggggCCCAAAGGG.CCCTCGGCCTGCCCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGc < 1:3353172/94‑1 (MQ=11)
cgccgAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGGCGGCGCGCCCCCCGGGCGGGGGGCCGGGCCCCGGTGTGCTTggggggg > 1:8027534/1‑98 (MQ=9)
ccgGGGGCCAAAG.GG.CACTCGGCCGGCCCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCAGGc < 2:3571130/101‑1 (MQ=17)
cgggggCCCAAG.GG.CCCTCGCCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCAGGCg < 1:1594644/98‑1 (MQ=14)
gCCCAAAGGG.CCCTGGGCCTGCCCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCAGGCGGTCg < 1:4458905/101‑1 (MQ=14)
cccAAG.GG.CCCTCGGCCTGCCCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCAGGCGGTCGTg < 1:4594129/101‑1 (MQ=255)
ccAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGGCGGCGCGCCGCCCGGGGGGGGGGCAGGGCCCCGTTTTGCTTTGGGGGGGCgggggggc > 2:4890433/1‑95 (MQ=2)
cACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGGGCGGGCGCGGCGCCCGGGCGGGGGGGAGGGCCCTGTTTTGCGTGGGGGGGGGGGGCGTGCCGCCgcg > 2:1550502/1‑101 (MQ=9)
|
TGCGCTGCGGCTGATGAAGGACGTTTGAGGCTGACTTGGCCTCGGCCATTGCCGAGGCC.AATCGCAACAGAGGTCCTGTGACCGCCGAGGGCCCAAA.GG.CACTCGGCCTGCGCCCGCCCCGCCATCGGCGGGCGCAGTCGCGCCGCCGGGGCGGAGCGCAGGCCTCTGTTGTGCTTGGGGCAGGCGGTCGTGCCGCAGCG > NC_014034/448680‑448879
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|