Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_014034 1,255,986 Δ1 bp 7.2% intergenic (+156/+86) RCAP_rcc01184 → / ← RCAP_rcc01185 CsbD family protein/methyl‑accepting chemotaxis sensory transducer

Read alignment evidence...
  seq id position change freq score reads annotation genes product
*NC_0140341,255,9860G→. 7.2% 44.1 ‑0.5 ‑0.4223intergenic (+156/+86)RCAP_rcc01184/RCAP_rcc01185CsbD family protein/methyl‑accepting chemotaxis sensory transducer
Reads supporting (aligned to +/- strand):  new base (7/9):  ref base (108/99):  total (115/108)
Fisher's exact test strand distribution p-value = 6.08e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.17e-01

Only 100 of 250 total aligned reads displayed.

GCTGTGGTACCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAA.GAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCAGGCGGCGCGCG  >  NC_014034/1255895‑1256085
                                                                                             |                                                                                                     
tgccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.gggggggggg                                                                                              <  2:5165537/91‑1 (MQ=255)
 gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGa                                                                                             <  1:4818513/92‑1 (MQ=255)
 gccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGAACGCGCCTTGCACC.TTGGCCCACATATCCC.ggggggggggg                                                                                             >  2:2842078/10‑100 (MQ=18)
  ccccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGaa                                                                                            <  2:2590932/93‑1 (MQ=255)
    ccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACt                                                                                          <  2:1099177/95‑1 (MQ=255)
    ccccgtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACt                                                                                          >  1:1891740/7‑101 (MQ=255)
    ccccgtcccGGCGGGCCCCCCCCAGGTGTGTTTCCTGCAAGGGGAAAATAACCCGGGGCGGGGCTTTCACC.TTGGGCCAATTATCCC.GGGGGGGGGGAACt                                                                                          <  2:1155823/95‑1 (MQ=255)
        gtcccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTccc                                                                                      <  1:2498214/99‑1 (MQ=255)
          cccTGCGGGCCTCCCCCCGGGTTATTTCCGCCAAGGGGAAAGCAACCCGGGCCGCGGCTTTCCCC.TGCGCCCAAACATCCC.GGGGGGGGGGactctccgca                                                                                    >  2:5622597/1‑92 (MQ=255)
          cccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGACCTTCCCga                                                                                    >  1:3546391/1‑101 (MQ=255)
          cccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCga                                                                                    >  1:5636741/1‑101 (MQ=255)
          cccTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCga                                                                                    >  1:771128/1‑101 (MQ=255)
           ccggCGGGCCTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCgaa                                                                                   <  2:3218121/98‑1 (MQ=255)
           ccTGGGGGACCCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCC.TTGGGCCAAATATCCCGGGGGGGGGGGAACTTCCCga                                                                                    <  2:4297778/101‑1 (MQ=21)
           ccTGCGGGACCCCCCCCGGGATTTTTCCGCCAAGGGGAAATGAACCCGGGGGGCGGCTTTCCCC.TTGGGCCAAAAATCCC.GGGGGGGGGGAACTTCCCgaa                                                                                   <  1:3105956/101‑1 (MQ=255)
            cTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTCCCCgaa.g                                                                                 >  2:4224026/1‑101 (MQ=255)
              gCGGGGCCCCCCCCGGGGTATTTCCGCCAAGGGGAAAAGAACCCGGGGCGCGGCTTTCCCC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCgaa.gga                                                                               <  2:206290/101‑3 (MQ=21)
               cGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGACCCCGGGGCGCGGCTTTCCCC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGaa.ggaa                                                                              <  1:351541/101‑1 (MQ=255)
               cGGGACCCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGaa.ggaa                                                                              <  1:4044891/101‑1 (MQ=255)
                gggccgccccccGGCATATTCCCGCGAGGGGAAAAGGCACCCGGGG.GTGGGTTTCCCCGTTGGGCCAAATTTCCC.GGGGGGGGGGAACTTCCCGaa.ggaaa                                                                             <  2:1041670/95‑2 (MQ=255)
                gggcccccccccGGGATATTTCCCCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGaa.ggaaa                                                                             <  2:2262819/95‑2 (MQ=21)
                 ggACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGaa.ggaaag                                                                            >  1:2002653/1‑99 (MQ=255)
                 ggACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGaa.ggaaag                                                                            >  1:5266352/1‑99 (MQ=255)
                 ggACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGaa.ggaaag                                                                            >  1:5035708/1‑99 (MQ=255)
                  gACCCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAaggaaaga                                                                            <  1:4280856/101‑1 (MQ=255)
                    cTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCGCC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAgg                                                                          <  2:5042617/101‑1 (MQ=255)
                    cTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAgg                                                                          >  2:1243374/1‑101 (MQ=255)
                    cTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAgg                                                                          >  2:5456118/1‑101 (MQ=255)
                    cTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAgg                                                                          >  2:1734931/1‑101 (MQ=255)
                       cccccGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCCCC.TTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCGAAGGAAAGAgggggg                                                                      <  1:4387253/101‑1 (MQ=21)
                        ccccGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCTAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAgggggg                                                                      <  2:2952348/101‑1 (MQ=255)
                        ccccGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAgggggg                                                                      >  2:1602329/1‑101 (MQ=255)
                          ccGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCa                                                                    <  2:53397/101‑1 (MQ=255)
                           cGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAg                                                                   >  2:1496079/1‑101 (MQ=255)
                            gggATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAgg                                                                  >  2:2431937/1‑101 (MQ=255)
                             ggATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAggg                                                                 >  1:1297161/1‑101 (MQ=255)
                                tatTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGccc                                                              >  2:2651193/1‑101 (MQ=255)
                                 atTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGcccc                                                             >  2:5583554/1‑101 (MQ=255)
                                 atTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGcccc                                                             >  1:5787014/1‑101 (MQ=255)
                                 atTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAAAGGGGGGAAGGAcccc                                                             >  1:952457/1‑101 (MQ=25)
                                     ccGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCG.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCttt                                                         <  2:3663110/101‑1 (MQ=255)
                                      cGCCAAGGGGAAATGAACCCGGGGCGGGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTc                                                        <  2:1523583/101‑1 (MQ=255)
                                         cAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCg                                                     >  1:5739779/1‑101 (MQ=255)
                                          aaGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGa                                                    <  2:2666064/101‑1 (MQ=255)
                                          aaGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGa                                                    <  1:3403511/101‑1 (MQ=255)
                                          aaGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAAAGGGGGGAGGGGCCCCCTTTCCCGa                                                    >  2:2514746/1‑101 (MQ=37)
                                           aGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGAt                                                   <  2:3188677/101‑1 (MQ=255)
                                           aGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGAt                                                   >  2:4049553/1‑101 (MQ=255)
                                           aGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAAAGGGGGGCGGGGCCCCCTTTCCCGAt                                                   >  1:2325575/1‑101 (MQ=37)
                                            ggggAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATc                                                  <  1:3649656/101‑1 (MQ=255)
                                             gggAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAATTTCCCGAAGGAAAGAGGGGGGCCGGGCCGCCTTTCCTGATCg                                                 >  2:380479/1‑101 (MQ=25)
                                             gggAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCg                                                 <  1:4611035/101‑1 (MQ=255)
                                              ggAAATGACCCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCG.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCgg                                                <  1:4289833/101‑1 (MQ=38)
                                              ggAAATGAACCCGGGGCGCGGTTTTCCCC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCgg                                                <  1:2043542/101‑1 (MQ=38)
                                                 atctaaCCCGGGGCGCGGCTTTCGCC.TTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGcc                                            <  2:3867006/97‑1 (MQ=37)
                                                 aaTGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGc                                             >  1:2290418/1‑101 (MQ=255)
                                                  aTGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGcc                                            >  1:1632606/1‑101 (MQ=255)
                                                  aTGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGcc                                            <  1:816231/101‑1 (MQ=255)
                                                   tGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGACCTTCCCGAAGGAAAAGGGGGGGCGGGGCCCCCTTTCCCCGCCGGGGcgg                                           >  2:4857006/1‑99 (MQ=25)
                                                    gAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCgg                                          >  2:3558807/1‑101 (MQ=255)
                                                     gaCCCGGGGGCCGGGCTTCCCC.TTGGGCCAAAAACCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGt                                         <  1:4676779/100‑1 (MQ=255)
                                                     aaCCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGt                                         <  1:5418692/101‑1 (MQ=255)
                                                     aaCCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC..GGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGccagac                                        >  1:3867248/1‑97 (MQ=37)
                                                      aCCCGGGGCGCGGCTTTCCCC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTg                                        <  2:3989624/101‑1 (MQ=255)
                                                       cccGGGGCGCGGCTTTCCCC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGc                                       <  1:3204570/101‑1 (MQ=255)
                                                       cccGAGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGc                                       >  2:4897123/1‑101 (MQ=38)
                                                        ccGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGcc                                      >  1:1177121/1‑101 (MQ=255)
                                                                gcgCTTTCACC.TTGGGCCAAATACCCC.GGGGGGGGGGAACTCCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCa                              <  2:5738154/99‑1 (MQ=255)
                                                                  gCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAgg                            >  1:406193/1‑101 (MQ=255)
                                                                  gCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAgg                            <  2:3612720/101‑1 (MQ=255)
                                                                  gCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAgg                            >  1:912857/1‑101 (MQ=255)
                                                                   cTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAggg                           <  2:650144/101‑1 (MQ=255)
                                                                    tttCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAgggg                          >  2:4979257/1‑100 (MQ=255)
                                                                    tttCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGt                          >  2:1934840/1‑101 (MQ=255)
                                                                      tCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.t                       >  1:1536033/1‑101 (MQ=255)
                                                                        aCC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTg                     <  1:5325683/101‑1 (MQ=255)
                                                                         cc.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTgg                    <  1:612680/101‑1 (MQ=255)
                                                                         cc.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTgg                    <  2:2932225/101‑1 (MQ=255)
                                                                          ccgtGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTgg                    <  1:5622889/98‑1 (MQ=255)
                                                                            ttGGGCCAAATATCCC.GGGGGGGCGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGcc                  <  2:5087008/101‑1 (MQ=255)
                                                                            tggggCCAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGcc                  <  1:4859857/99‑1 (MQ=255)
                                                                                 ccAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCa             <  1:1957474/101‑1 (MQ=255)
                                                                                 ccAAATATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCa             >  1:2723505/1‑101 (MQ=255)
                                                                                 ccAAATAGCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCa             <  2:3407751/101‑1 (MQ=255)
                                                                                  cAAATATCCC..GGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGGC.TTGGCCgggtagg           >  2:272718/1‑96 (MQ=38)
                                                                                  cAAAGAGCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCAg            <  1:5456408/101‑1 (MQ=255)
                                                                                   aaaTATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGGCAgg           >  2:3524033/1‑101 (MQ=255)
                                                                                    aaTATCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGCCAggg          >  2:2468212/1‑100 (MQ=255)
                                                                                     atatCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCAggcg         >  1:3055089/1‑101 (MQ=255)
                                                                                     atatCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGCGCGGCAGGGGC.TTGGCCGGGCCggcg         >  1:5479683/1‑101 (MQ=255)
                                                                                     atatCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGCCCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCAggtg         >  1:5746894/1‑99 (MQ=255)
                                                                                     atatCCC..GGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGGGCCGCGCGGCAGGGGC.TTGGCCGGGCAggcgg        >  1:3804241/1‑101 (MQ=255)
                                                                                      tatCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCCggcgg        >  2:1968643/1‑101 (MQ=255)
                                                                                       atCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCAggcggg       >  1:2256669/1‑100 (MQ=255)
                                                                                       atCCC.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGACCGGGGCCGGTGCCGCGCGGCAGGGCC.TTGGCCGGTCCggcggc       >  2:460634/1‑101 (MQ=255)
                                                                                         ccc.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCAGGCGgcgc     >  1:4418199/1‑101 (MQ=255)
                                                                                         ccc.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGACCAGGGCCGGGCGGCAGGGTC.TCGGCCGGTCAtgcggtcc     >  2:5014233/1‑98 (MQ=255)
                                                                                          cc.GGGGGGGGGGAATTCCCCAAAGGAAAGGGGGGGGCAGGG.CCCCTTTTCCGATTCGGGGCGGGGGCGGGCCGCAGGGGCTTTGGCCGG.CCGGCGgggcgc   >  2:3360036/1‑101 (MQ=255)
                                                                                          cc.GGGGGGGGGGAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCAGGCGgcgcg    <  1:1846715/101‑1 (MQ=255)
                                                                                           cgggggggggggAACTTCCCGAAGGAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCAGGCGgcgcg    <  1:3683595/99‑1 (MQ=255)
                                                                                             |                                                                                                     
GCTGTGGTACCCCTGCGGGACTCCCCCCGGGATATTTCCGCCAAGGGGAAATGAACCCGGGGCGCGGCTTTCACC.TTGGGCCAAATATCCC.GGGGGGGGGGAACTTCCCGAA.GAAAGAGGGGGGCAGGGCCCCCTTTCCCGATCGGGGCCGGTGCCGCGCGGCAGGGTC.TTGGCCGGTCAGGCGGCGCGCG  >  NC_014034/1255895‑1256085

Base quality scores:  ATCG  < 3 ≤  ATCG  < 10 ≤  ATCG  < 21 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG