BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,397,551	Δ1 bp	10.3%	coding (1433/1578 nt)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,397,551	0	T→.	10.3%	91.8 ‑1.1 ‑0.5	322	coding (1433/1578 nt)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (13/19): ref base (128/125): total (154/168)
Fisher's exact test strand distribution p-value = 3.49e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.94e-01

Only 100 of 352 total aligned reads displayed.


GGCGTGGATCGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGG  >  NC_014034/1397451‑1397651


 gCGTGGATCGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTc                                                                                                        <  1:4104137/101‑1 (MQ=255)


    tGGATCGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.Agc                                                                                                    >  2:3767413/1‑101 (MQ=255)


      gATCGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.Agcgc                                                                                                  >  2:1663967/1‑101 (MQ=255)


       aTCGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGcgcc                                                                                                 >  1:5405108/1‑101 (MQ=255)


        tCGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGcgccg                                                                                                >  2:1021237/1‑101 (MQ=255)


         cGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGcgccgc                                                                                               <  2:5013727/101‑1 (MQ=255)


           aaaCACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCgcgc                                                                                             >  2:339084/1‑101 (MQ=255)


            gctcttccgatctCCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCt                                                                                            <  2:410508/92‑1 (MQ=38)


            aaCACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCt                                                                                            >  2:4691473/1‑101 (MQ=255)


             acacCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.g                                                                                          <  1:1104576/101‑1 (MQ=255)


              cacCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.Ga                                                                                         >  1:2859937/1‑101 (MQ=255)


               cccGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.c                                                                                       <  1:3801799/100‑1 (MQ=255)


               acCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.c                                                                                       >  2:2523140/1‑101 (MQ=255)


                   tcatcaCCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCg                                                                                   >  1:836117/1‑101 (MQ=255)


                     atccCCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCt                                                                                 <  1:2190789/101‑1 (MQ=255)


                     atcaCCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCt                                                                                 >  1:2607650/1‑101 (MQ=255)


                        accacGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTccc                                                                              <  1:3321922/101‑1 (MQ=255)


                        accacGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTccc                                                                              >  2:290964/1‑101 (MQ=255)


                          cacGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTccccc                                                                            >  1:1742685/1‑101 (MQ=255)


                           acGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTcccccc                                                                           >  2:901066/1‑101 (MQ=255)


                            cGCAACCGCCCTGCACCCCCGGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCcg                                                                          <  2:1346350/101‑1 (MQ=255)


                            cGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCcg                                                                          <  1:3541896/101‑1 (MQ=255)


                             gCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCcgc                                                                         <  2:2355602/101‑1 (MQ=255)


                               aaCCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCgg                                                                       >  2:5043873/1‑101 (MQ=255)


                               aaCCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCCCCCCCCGCgg                                                                       >  2:4718922/1‑101 (MQ=255)


                                      cTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTg                                                                <  2:3712684/101‑1 (MQ=255)


                                      cTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTg                                                                <  2:4245535/101‑1 (MQ=255)


                                       ggaacaggatgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTAT.GCTGGC.TC.GA.C..CGAGTT.CACGGCGGGCT.AT.CGTCGCTCCCCCCGCGGGGGCGTGGa                                                              <  1:1010202/91‑1 (MQ=2)


                                        gCACCACCGGTCGCTCCCCCCGGGGGGGCGTGGATCGAAACAAC.CCAAAAATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGa                                                              <  1:4810009/101‑1 (MQ=38)


                                         gcgcgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTG.ATGACCA.G.AT.C..CGCAAT.CG.GCCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                             <  2:1775035/94‑1 (MQ=0)


                                         caccacCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGAt                                                             <  2:3292588/101‑1 (MQ=255)


                                         caccacCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGAt                                                             <  1:1679812/101‑1 (MQ=255)


                                          ccgctgcgTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACC.CCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATc                                                            <  1:2078904/94‑1 (MQ=0)


                                           cgctgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACC.CCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                           <  1:766838/95‑1 (MQ=2)


                                           ccaccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                           >  2:5314202/1‑101 (MQ=255)


                                            cgagcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                           <  1:3618269/96‑1 (MQ=0)


                                            ccccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAA..CTGACCCGGCAC.C..GGCCTA.TGCGCTG.GAC.GT.GGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                         >  1:1842902/3‑101 (MQ=2)


                                            aggatgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTAT.GCTGGC.TC.GA.C..CGAGTT.CACGGCGGGCT.AT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                         <  2:3980391/96‑1 (MQ=2)


                                             gctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTG.ATGACCA.G.AT.C..CGCAAT.CG.GCCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                         >  1:1270437/4‑101 (MQ=2)


                                              agcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                         <  1:2670299/98‑1 (MQ=2)


                                               gcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                        >  2:5153600/3‑101 (MQ=2)


                                               cGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                       >  1:516151/1‑101 (MQ=255)


                                               cGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                       >  1:5588896/1‑101 (MQ=255)


                                                ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCGC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                                      <  1:929925/101‑1 (MQ=255)


                                                cgTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                       <  2:4198967/100‑1 (MQ=2)


                                                 gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACC.CCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                     <  1:4666627/101‑1 (MQ=2)


                                                 gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                     <  2:4417526/101‑1 (MQ=255)


                                                 gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCC.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                     <  1:531319/101‑1 (MQ=255)


                                                 gTCGCACCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAA.TC.C..GCAATC.GGCCGGGCTCG.AT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcg                                                      <  1:4623812/101‑2 (MQ=2)


                                                  tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTAT.GCTGGC.TC.GA.C..CGAGTT.CACGGCGGGCT.AT.CGTCGCTCCCCCCGCGGGGGGGGGGAGCGaaaagggg                                                   >  1:3578633/1‑96 (MQ=0)


                                                  tCGCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaa                                                     >  2:4563723/1‑100 (MQ=2)


                                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACACC.CCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcg                                                   >  1:2507597/1‑100 (MQ=2)


                                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaa                                                    >  2:1224800/1‑99 (MQ=2)


                                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaa                                                    <  2:1390842/101‑3 (MQ=2)


                                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaa                                                    >  2:1495369/1‑99 (MQ=2)


                                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACTAT.GCTGGC.TC.GA.C..CGAGTT.CACGGCGGGCT.AT.CGTCGCTCCCCCCCCGGGGGCGGGGGTCGAAAcggggcg                                                 >  2:2311462/1‑95 (MQ=0)


                                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaaa                                                   <  2:3507299/101‑4 (MQ=2)


                                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaaa                                                   <  1:2802386/101‑4 (MQ=2)


                                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaaa                                                   >  2:1553241/1‑98 (MQ=2)


                                                    gCTCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGAGGCGTGGATCGAAACaaaa                                                   <  2:3157138/101‑4 (MQ=2)


                                                     cTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCcgc                                                 <  1:4905232/101‑1 (MQ=255)


                                                      tCCCCCCGCGGGGGCGTGGATCGAAACACC.CCGAACCT..GT.C..GGCCGCGAACACCGATAC.CG.CGGCGCTCCCCCCGCGGGGGCGGGGATCGAAACATcgttc                                                >  2:2835365/1‑97 (MQ=2)


                                                      tCCCCCCGCGGGGGCGTGGATCGAAACACC.AATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaaaag                                                 <  1:3840092/101‑6 (MQ=0)


                                                      tCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCcgcg                                                >  1:5073642/1‑101 (MQ=255)


                                                      cccccccGCGGGGGCGTGGATCGAATCAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCcgcg                                                <  1:4164889/100‑1 (MQ=255)


                                                      cccccccGCGGGGGCGTGGATCGAAACACC.CCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatg                                                <  2:4630797/100‑5 (MQ=2)


                                                       ccccccGCGGGGGCGTGGATCGAAACTAT.GCTGGC.TC.GA.C..CGAGTT.CACGGCGGGCT.AT.CGTCGCTCCCCCCGCGGGGGCGGGGGTCGAAAcggggcgaag                                              >  1:1531939/1‑92 (MQ=2)


                                                        cccccGCGGGGGCGTGGATCGAAACACC.CCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatgat                                              <  2:5459070/101‑7 (MQ=2)


                                                        cccccGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.CGCGCCGCTCT.CA.CGTCGTTCCTCCCGCGGGTGCGTTTATCTAAActcacgaaga                                              >  2:310365/1‑92 (MQ=21)


                                                         ccccGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGAt                                             <  2:1969322/101‑1 (MQ=255)


                                                          cccGCGGGGGCGTGGATCGAAACACC.CCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatgatca                                            <  1:5667739/101‑9 (MQ=0)


                                                          cccGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATc                                            <  1:1205088/101‑1 (MQ=255)


                                                          cccGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATc                                            <  2:550667/101‑1 (MQ=255)


                                                           ccGCGGGGGCGTGGATCGAAACAAC.CCGGTCATG.GC.C..CGCCGC.AGCGCCGCGCT.GA.CGCCCCTCCCCCCGCGGGGGCGGGGATCGAAACAACCGCGGTTCg                                           >  2:1872416/1‑101 (MQ=37)


                                                             gcgGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGc                                         >  1:2243043/1‑101 (MQ=255)


                                                              cgGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCg                                        <  1:1440409/101‑1 (MQ=255)


                                                               gggggCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGt                                       <  1:3144757/101‑1 (MQ=255)


                                                                 gggCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGa                                     >  1:337808/1‑101 (MQ=255)


                                                                        gATCGAAACAAC.CCGATCGTT.TC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgccc                              <  2:670665/101‑1 (MQ=255)


                                                                        gATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgccc                              >  2:2158615/1‑101 (MQ=255)


                                                                          tCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgccccg                            >  1:303692/1‑101 (MQ=255)


                                                                             aaaCAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgccccgccc                         <  2:5688214/101‑1 (MQ=255)


                                                                             aaaCAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgccccgccc                         >  1:371742/1‑101 (MQ=255)


                                                                             aaaCAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgccccgccc                         >  1:3850196/1‑101 (MQ=255)


                                                                             aaaCAAC.CAGAGCATG.GC.C..CCCCTC.AGCGCCGCACG.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgccccgccc                         <  1:644530/101‑1 (MQ=37)


                                                                               acaac.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgcccccccccc                       >  1:4264022/1‑99 (MQ=255)


                                                                               acaac.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCAt                       <  2:3822088/101‑1 (MQ=255)


                                                                                 acc.ccGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCg                     <  1:2313890/99‑1 (MQ=255)


                                                                                  ac.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCgg                    <  2:734497/101‑1 (MQ=255)


                                                                                  ac.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCgg                    >  2:2436555/1‑101 (MQ=255)


                                                                                      cGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCg                 >  2:2663564/1‑101 (MQ=255)


                                                                                       gATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCCTCGGTCGc                >  2:4907532/1‑101 (MQ=255)


                                                                                        aTCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCt               <  2:3598319/101‑1 (MQ=255)


                                                                                        aTCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCt               >  2:3248869/1‑101 (MQ=255)


                                                                                        aTCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCt               <  2:2649768/101‑1 (MQ=255)


                                                                                                c.c..cGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCcg        <  1:243880/101‑1 (MQ=255)


                                                                                                     cGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCcgcg      <  1:2144085/101‑1 (MQ=255)


                                                                                                     cGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCcgcg      <  2:3847102/101‑1 (MQ=255)


                                                                                                      cccTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGAgg     <  2:813017/100‑1 (MQ=255)


                                                                                                       ccTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCggg    <  1:4340221/101‑1 (MQ=255)


GGCGTGGATCGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAC.CCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGG  >  NC_014034/1397451‑1397651

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 39 ≤


ATCG