BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,960,668	Δ1 bp	93.9%	coding (1111/1539 nt)	RCAP_rcc01813 ←	AMP‑dependent synthetase and ligase

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,960,668	0	G→.	93.9%	41.3 ‑1.7 ‑0.9	247	coding (1111/1539 nt)	RCAP_rcc01813	AMP‑dependent synthetase and ligase
Reads supporting (aligned to +/- strand): new base (98/134): ref base (9/6): total (107/140)
Fisher's exact test strand distribution p-value = 1.91e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.34e-01

Only 100 of 258 total aligned reads displayed.


CCTGATAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGG.CTCGGCGGCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCTCCGGGGGACAGGAC  >  NC_014034/1960569‑1960764


ccTGATAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTcggcg                                                                                                  <  1:1401536/101‑1 (MQ=255)


 cTGATAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTcggcgc                                                                                                 >  2:3052969/1‑100 (MQ=255)


    aTAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGCGCccc                                                                                              <  1:1024742/101‑1 (MQ=255)


    aTAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGCGCccc                                                                                              <  1:3210080/101‑1 (MQ=255)


    aTAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGCGCccc                                                                                              >  2:3450950/1‑101 (MQ=255)


     tAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGCGCccca                                                                                             <  2:4553294/101‑2 (MQ=255)


     tAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGCGCccca                                                                                             <  2:3619240/101‑2 (MQ=255)


     tAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGCGCccca                                                                                             <  1:2636099/101‑2 (MQ=255)


      aGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGCGCCCCCa                                                                                            >  2:3983356/1‑101 (MQ=255)


      aGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCaa                                                                                           <  2:5131371/101‑1 (MQ=255)


         cGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAg                                                                                        >  1:439772/1‑101 (MQ=255)


          gATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGc                                                                                       <  2:2878863/101‑1 (MQ=255)


            tGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCg                                                                                     <  2:1597186/101‑1 (MQ=255)


            tGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCg                                                                                     >  1:5406132/1‑101 (MQ=255)


             ggCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGa                                                                                    >  2:1783242/1‑101 (MQ=255)


             ggCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGa                                                                                    >  1:3836811/1‑101 (MQ=255)


              gCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAg                                                                                   <  2:1176768/101‑1 (MQ=255)


              gCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAg                                                                                   <  1:3943162/101‑1 (MQ=255)


              gCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAg                                                                                   >  2:5794552/1‑101 (MQ=255)


                  cGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGaaa                                                                               <  2:2053172/101‑1 (MQ=255)


                   ggCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAACAGCCGAGGaaaa                                                                              >  2:1938656/1‑101 (MQ=255)


                      cTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGcc                                                                           >  1:1660055/1‑101 (MQ=255)


                       tCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGccc                                                                          >  2:5672347/1‑101 (MQ=255)


                       tCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGccc                                                                          >  2:5525025/1‑101 (MQ=255)


                          gTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCgg                                                                       >  2:912340/1‑101 (MQ=255)


                          gTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCgg                                                                       >  1:3782325/1‑101 (MQ=255)


                          gTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCgg                                                                       <  1:5354138/101‑1 (MQ=255)


                          gTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCgg                                                                       <  1:1923659/101‑1 (MQ=255)


                          gTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCgg                                                                       <  1:59591/101‑1 (MQ=255)


                            cagccGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCACGGAt                                                                     <  2:614807/98‑1 (MQ=255)


                            cATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGAt                                                                     >  1:4494529/1‑101 (MQ=255)


                             aTCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATc                                                                    >  1:5301175/1‑101 (MQ=255)


                             aTCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATc                                                                    >  1:3389668/1‑101 (MQ=255)


                             aTCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCAAATAGCCGAGGAAAAGCCCCGGATc                                                                    <  1:2464575/101‑1 (MQ=255)


                             aTCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACCTTGCCCGCGCCTCGGCCTCGGC.CCCCCAATACCGCAGGAAAAGCCCCGGATc                                                                    >  1:2106807/1‑101 (MQ=255)


                              tCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCg                                                                   <  1:3967964/101‑1 (MQ=255)


                              tCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCg                                                                   <  1:1056647/101‑1 (MQ=255)


                               ccGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGc                                                                  >  2:2353474/1‑101 (MQ=255)


                               ccGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGc                                                                  >  2:2919809/1‑101 (MQ=255)


                                 gCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTg                                                                <  2:3676680/101‑1 (MQ=255)


                                  cACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGc                                                               <  1:5122532/101‑1 (MQ=255)


                                  cACGATGTCGCCGGTGCGGAACCAGCCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGc                                                               <  2:3573439/101‑1 (MQ=255)


                                   aCGATGTCGCCGGTGCGGACCCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCa                                                              <  2:439725/101‑1 (MQ=255)


                                     gaggTCGCCGGTGCGGAACCAGCCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAAt                                                            <  2:789941/98‑1 (MQ=255)


                                       tGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGc                                                          >  1:5203950/1‑101 (MQ=255)


                                         tCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCAc                                                        <  1:1413812/101‑1 (MQ=255)


                                          cGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCAcc                                                       >  1:5513597/1‑101 (MQ=255)


                                           gCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCg                                                      >  2:1713159/1‑101 (MQ=255)


                                             cGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGAc                                                    >  1:5082813/1‑101 (MQ=255)


                                             cGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGAc                                                    <  2:2384256/101‑1 (MQ=255)


                                              ggTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACa                                                   <  2:3836569/101‑1 (MQ=255)


                                              ggTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACa                                                   >  2:2592991/1‑101 (MQ=255)


                                               gTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAg                                                  >  1:988990/1‑101 (MQ=255)


                                                 gCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCt                                                <  1:3416588/101‑1 (MQ=255)


                                                  cGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTc                                               <  2:4926795/101‑1 (MQ=255)


                                                  cGGAACCAGTCCCCGCCCGCCGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTc                                               <  2:703927/101‑1 (MQ=255)


                                                     aaCCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGcc                                            >  2:2982837/1‑101 (MQ=255)


                                                      aCCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGccc                                           <  1:842263/101‑1 (MQ=255)


                                                      aCCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGccc                                           <  2:4991488/101‑1 (MQ=255)


                                                       ccAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCg                                          >  2:5307969/1‑101 (MQ=255)


                                                       ccAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCg                                          <  1:1312544/101‑1 (MQ=255)


                                                          gTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGtt                                       <  1:5552669/101‑1 (MQ=255)


                                                          gTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGtt                                       <  2:5447242/101‑1 (MQ=255)


                                                          gTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAACCCCCGATCGCTGCCATGCACCGACACCTCCCCCGGtt                                       >  2:4871560/1‑101 (MQ=255)


                                                           tCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCTGTTc                                      <  2:4511708/101‑1 (MQ=255)


                                                           tCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTc                                      <  2:5405842/101‑1 (MQ=255)


                                                           tCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTc                                      <  1:3727784/101‑1 (MQ=255)


                                                             cccGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGc                                    >  2:5643905/1‑101 (MQ=255)


                                                              ccGTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGcc                                   <  1:3022539/101‑1 (MQ=255)


                                                                gTCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGcccc                                 <  1:223812/101‑1 (MQ=255)


                                                                 tCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCg                                <  2:5390690/101‑1 (MQ=255)


                                                                 tCCGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCg                                <  1:5706225/101‑1 (MQ=255)


                                                                  ccGCGGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCgg                               >  2:3259998/1‑101 (MQ=255)


                                                                    gcgGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCgggg                             <  2:3900407/101‑1 (MQ=255)


                                                                    gcgGTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCgggg                             <  1:3058478/101‑1 (MQ=255)


                                                                      ggTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGcc                           >  1:3704562/1‑100 (MQ=255)


                                                                       gTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCCATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCAc                          >  1:2000994/1‑101 (MQ=255)


                                                                       gTGAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCAc                          <  1:3983600/101‑1 (MQ=255)


                                                                         gAACTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCg                        >  2:134140/1‑101 (MQ=255)


                                                                            cTTTGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGAt                     >  2:637962/1‑101 (MQ=255)


                                                                             tttGCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCCGGGCACCGGATg                    >  1:2849739/1‑101 (MQ=255)


                                                                                gCCCGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGcc                 <  1:3645377/101‑1 (MQ=255)


                                                                                  ccGCGCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGccct               <  1:4567366/101‑3 (MQ=255)


                                                                                   cgcgCCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGGCCGGTTCGCCCCGGGGCACCGGATGGccctc              <  2:4804463/101‑4 (MQ=255)


                                                                                     cgcCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGccctcgg            <  2:2530504/101‑6 (MQ=255)


                                                                                     cgcCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGccctcgg            >  2:129051/1‑96 (MQ=255)


                                                                                     cgcCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGccctcgg            <  2:5173996/101‑6 (MQ=255)


                                                                                      gcCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCggg           >  1:4199157/1‑101 (MQ=255)


                                                                                      gcCTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCggg           >  1:671385/1‑101 (MQ=255)


                                                                                       ccTCGGCCTCGGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCgggg          <  2:4698369/101‑1 (MQ=255)


                                                                                        ctcggcctcgGC.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCggggg         <  1:912416/101‑1 (MQ=255)


                                                                                         tcggcctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCGGGGGa        <  2:4290432/96‑1 (MQ=255)


                                                                                            gcctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCGGGGGACAg     <  2:2201876/99‑1 (MQ=255)


                                                                                            gcctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCGGGGGACAg     <  1:3505064/99‑1 (MQ=255)


                                                                                             cctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCGGGGGACAgg    <  1:3919293/100‑1 (MQ=255)


                                                                                             cctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCGGGGGACAgg    <  1:4129821/100‑1 (MQ=255)


                                                                                             cctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCGGGGGACAgg    <  2:4146087/100‑1 (MQ=255)


                                                                                              ctcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCGGGGGACAGGa   <  1:1516235/101‑1 (MQ=255)


                                                                                               tcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCCTCGGGGGACAGGAc  <  1:1833489/101‑1 (MQ=255)


                                                                                               tcggc.GCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCACCGGGGCACCGGATGGCCCCCGGGGGGCATGAc  >  1:4985877/1‑101 (MQ=255)


CCTGATAGGCGATGGCCCCGGCCTCGGTCATCCGCACGATGTCGCCGGTGCGGAACCAGTCCCCGTCCGCGGTGAACTTTGCCCGCGCCTCGG.CTCGGCGGCCCCAATAGCCGAGGAAAAGCCCCGGATCGCTGCAATGCACCGACAGCTCGCCCGGTTCGCCCCGGGGCACCGGATGGCCTCCGGGGGACAGGAC  >  NC_014034/1960569‑1960764

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 29 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG