| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,057,828 | Δ1 bp | 14.7% | intergenic (‑594/‑308) | RCAP_rcc01900 ← / → RCAP_rcc01901 | hemolysin‑type calcium‑binding repeat family protein/polyphosphate kinase 2 domain‑containing protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,057,828 | 0 | G→. | 14.7% | 81.0 ‑0.2 ‑0.5 | 177 | intergenic (‑594/‑308) | RCAP_rcc01900/RCAP_rcc01901 | hemolysin‑type calcium‑binding repeat family protein/polyphosphate kinase 2 domain‑containing protein |
| Reads supporting (aligned to +/- strand): new base (11/15): ref base (69/82): total (80/97) | ||||||||||
| Fisher's exact test strand distribution p-value = 8.33e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.00e-01 | ||||||||||
Only 100 of 188 total aligned reads displayed.
GTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CCGCG.CGC.AGCG.TTCCGAACCGGCATCAATCTT.GG.CCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCAAA > NC_014034/2057732‑2057911
|
gTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.Cc.cg.cgc > 1:4727346/1‑101 (MQ=255)
gTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.Cc.cg.cgc > 2:5384777/1‑101 (MQ=255)
ccTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.Cc.cg.cgccg < 1:5596783/101‑3 (MQ=255)
cTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGc > 1:658477/1‑101 (MQ=255)
tGTTTACCGCCCATTAGCCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGca < 1:825080/101‑2 (MQ=255)
gTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaa > 2:4750152/1‑99 (MQ=255)
tttTCCGCCCATTAGCCCTGCTTCGGCGCGTGGACTTCGGGGGGGCGGCGGGTCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaag < 2:1890280/101‑4 (MQ=255)
tttACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaag > 2:2365727/1‑98 (MQ=255)
tACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcg < 2:5039885/101‑6 (MQ=255)
tACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcg > 1:2294712/1‑96 (MQ=255)
aCCGCCCATTAACCCTGCTTAGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGccagcgt > 2:913055/1‑95 (MQ=255)
cGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcgttt < 2:3079999/101‑9 (MQ=255)
gCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcgtttc < 1:4169772/101‑10 (MQ=255)
gCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcgtttc < 2:3218194/101‑10 (MQ=255)
gCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcgtttc < 2:4923648/101‑10 (MQ=255)
gCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcgtttc < 1:1612047/101‑10 (MQ=255)
cccATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcgtttcc > 1:46918/1‑91 (MQ=255)
cccATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcgtttcc < 1:201301/101‑11 (MQ=255)
cccATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcgtttcc < 1:3819593/101‑11 (MQ=255)
cccATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CC.CG.CGC.CGcaagcgtttcc > 2:1555414/1‑91 (MQ=255)
aaCCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCg > 2:1573778/1‑101 (MQ=255)
cccTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGc > 2:4443201/1‑101 (MQ=255)
cccTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGc < 2:4288153/101‑1 (MQ=255)
cccTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGc < 1:5738032/101‑1 (MQ=255)
cccTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGc < 2:570466/101‑1 (MQ=255)
ccTGCTTCGGCGCGCGGACTCCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCa > 2:1929864/1‑101 (MQ=255)
cTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCAt < 1:2531174/101‑1 (MQ=255)
cTGCTTCGCCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGCTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCAt > 2:4814538/1‑101 (MQ=255)
tGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATc < 2:5235845/101‑1 (MQ=255)
gCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCa < 1:5110190/101‑1 (MQ=255)
gCTTCGGCGCGCGGACTTCGGGGCGGAGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCa < 1:1491556/101‑1 (MQ=255)
ttCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGACAAA.C.CCGCGCCGCAAGCGTTTCCGAACCGGCAtaatt > 1:1156982/1‑97 (MQ=255)
ttCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCatt < 2:2993693/101‑3 (MQ=255)
ttCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCatt < 2:822817/101‑3 (MQ=255)
ttCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCatt < 1:1029305/101‑3 (MQ=255)
ttCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCatt > 1:1569643/1‑99 (MQ=255)
tCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTc < 2:769837/101‑1 (MQ=255)
cGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCt > 2:3745674/1‑101 (MQ=255)
cGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCt < 2:3016835/101‑1 (MQ=255)
ggCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCtt > 1:602327/1‑101 (MQ=255)
ggCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCtt < 2:658420/101‑1 (MQ=255)
ggCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCtt > 2:2260781/1‑101 (MQ=255)
ggCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCtt < 1:3878468/101‑1 (MQ=255)
gcgcgcGGACGTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.g < 2:1103492/101‑1 (MQ=255)
cgcgcgGACTTCGGGGCAGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.gg < 1:2830365/101‑1 (MQ=255)
gcgcgGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GG.c < 1:2888731/101‑1 (MQ=255)
gcgGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GG.ccc > 1:2675772/1‑101 (MQ=255)
cgGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GG.cccc > 1:1285168/1‑101 (MQ=255)
ccgACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GG.cccc < 2:1024579/99‑1 (MQ=255)
ggACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GG.ccccc < 1:218588/101‑1 (MQ=255)
gACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GG.cccccc < 2:1788743/101‑2 (MQ=255)
aCTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GG.ccccccg < 1:4814819/101‑3 (MQ=255)
ttCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GG.ccccccgcc > 1:5209739/1‑97 (MQ=255)
ttCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GG.ccccccgcc < 1:1817323/101‑5 (MQ=255)
tCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GG.ccccccgccg < 2:5787656/101‑6 (MQ=255)
cGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCgg > 1:779762/1‑101 (MQ=255)
cGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCgg > 2:4593275/1‑101 (MQ=255)
ggggCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCggg < 2:1408739/101‑1 (MQ=255)
ggggCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCggg < 2:1655807/101‑1 (MQ=255)
gggCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGa < 2:5455272/101‑1 (MQ=255)
ggcggcggcGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGAc < 1:2148911/101‑1 (MQ=255)
cggcggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCTCCGGGACaa > 1:3448384/1‑101 (MQ=255)
cggcggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACaa < 2:1309344/101‑1 (MQ=255)
cggcggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACaa < 2:2927556/101‑1 (MQ=255)
ggcggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTTAGC.CCCCCGCCGGGACAAt > 2:5500912/1‑101 (MQ=255)
ggcggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAAt < 2:2631554/101‑1 (MQ=255)
cggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCa > 1:2823821/1‑101 (MQ=255)
ggcggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCAc > 2:272798/1‑101 (MQ=255)
ggcggAGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCAc > 2:4237504/1‑101 (MQ=255)
cggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACgg > 2:5283798/1‑101 (MQ=255)
cggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACgg > 2:717646/1‑101 (MQ=255)
cggGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACgg > 1:4605138/1‑101 (MQ=255)
tctctctTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGgcc < 2:3588296/98‑1 (MQ=255)
gggCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGgcc < 2:3291773/101‑1 (MQ=255)
ggCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGgccg > 2:1286767/1‑101 (MQ=255)
ctctTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGgccaga > 1:3588513/1‑98 (MQ=255)
ctTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGgccgcccc < 1:4221678/101‑3 (MQ=255)
ttGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCa < 1:4498252/101‑1 (MQ=255)
ttGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCa < 2:3465290/101‑1 (MQ=255)
tGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCAt > 1:4763432/1‑101 (MQ=255)
tGCGATCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCAt < 1:2337936/101‑1 (MQ=255)
tCCTGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTc > 2:3699626/1‑101 (MQ=255)
tGCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGc > 1:5375591/1‑101 (MQ=255)
gCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGcc < 2:3744794/101‑1 (MQ=255)
gCGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGcc < 1:1903106/101‑1 (MQ=255)
cGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCa < 2:3511249/101‑1 (MQ=255)
cGTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCa > 2:1178539/1‑101 (MQ=255)
gTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCAt > 1:1997454/1‑101 (MQ=255)
gTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCAt > 1:3038524/1‑101 (MQ=255)
gTTTCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCAt < 1:3765219/101‑1 (MQ=255)
ttCCGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTg < 2:3910792/101‑1 (MQ=255)
tCCGTATTGCCCAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGcaagctg < 2:4003679/101‑7 (MQ=255)
ccGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCg > 1:67080/1‑101 (MQ=255)
cGGATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGa > 1:3907494/1‑101 (MQ=255)
ggATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGAt > 1:328837/1‑101 (MQ=255)
gATTGGCGAC.AACC.CCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATc < 1:5284088/101‑1 (MQ=255)
gATTGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATc < 1:913131/101‑1 (MQ=255)
ttGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCaa > 2:1282623/1‑101 (MQ=255)
tGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCaaa < 2:2823660/101‑1 (MQ=255)
tGGCGAC.AA.TCCCGCGCCGCAAGCGTTTCCGAACCGGCATCATTCTT.GGCCCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCaaa > 2:4712998/1‑101 (MQ=255)
|
GTCCTGTTTACCGCCCATTAACCCTGCTTCGGCGCGCGGACTTCGGGGCGGCGGCGGGGCTCTTGCGATCCTGCGTTTCCGGATTGGCGAC.AA.T.CCGCG.CGC.AGCG.TTCCGAACCGGCATCAATCTT.GG.CCCCCGCCGGGACAATCACGGCCGCCTCATTGTTCCGCCATTGCGATCAAA > NC_014034/2057732‑2057911
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|