BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,162,395	Δ1 bp	100%	intergenic (+128/‑329)	RCAP_rcc02005 → / → RCAP_rcc02006	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,162,395	0	C→.	100.0%	1454.7	330	intergenic (+128/‑329)	RCAP_rcc02005/RCAP_rcc02006	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): new base (169/161): ref base (0/0): total (169/161)

Only 100 of 337 total aligned reads displayed.


CGCCATGAAATATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCTCGCCGCGGATCTCGATTGATTTCAGGGCGCTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.ACGGGGACAGTC  >  NC_014034/2162299‑2162489


cgcCATGTAATATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCTCCCTCCGAAACCt.gccgc                                                                                            <  2:5115994/101‑1 (MQ=255)


 gcCATGAAATATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCcgcg                                                                                           <  1:1071923/101‑1 (MQ=255)


  ccATGAAATATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCgg                                                                                          <  2:5772303/101‑1 (MQ=255)


    aTGAAATATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGAt                                                                                        <  1:5117521/101‑1 (MQ=255)


      gAAATATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGAtct                                                                                      <  1:3061779/101‑1 (MQ=255)


      gAAATATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGAtct                                                                                      >  1:2939646/1‑101 (MQ=255)


       aaaTATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGAtctc                                                                                     >  1:593409/1‑101 (MQ=255)


        aaTATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCg                                                                                    <  2:1073731/101‑1 (MQ=255)


        aaTATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCg                                                                                    >  1:4155793/1‑101 (MQ=255)


        aaTATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCg                                                                                    <  2:297108/101‑1 (MQ=255)


        aaTATATGCATATACTTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCg                                                                                    <  1:4999459/101‑1 (MQ=255)


         atatatGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCga                                                                                   >  1:3418188/1‑101 (MQ=255)


            tatGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCgattg                                                                                >  2:1840808/1‑101 (MQ=255)


            tatGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCgattg                                                                                <  1:2523568/101‑1 (MQ=255)


            tatGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCgagat                                                                                >  2:5003109/1‑98 (MQ=255)


             atGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCgattga                                                                               >  2:803948/1‑101 (MQ=255)


               ggATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCgattgatt                                                                             <  2:1015465/101‑1 (MQ=255)


               ggATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCgattgatt                                                                             <  1:3978101/101‑1 (MQ=255)


                 atatAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTc                                                                           <  1:2986264/101‑1 (MQ=255)


                  tataATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCa                                                                          <  1:5460221/101‑1 (MQ=255)


                   ataATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAg                                                                         <  1:3569038/101‑1 (MQ=255)


                      aTTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGgc                                                                      <  2:4041097/101‑1 (MQ=255)


                      aTTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGgc                                                                      >  1:1611446/1‑101 (MQ=255)


                        tCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGTATTTGTCGTCACCCTCCGAGACCT.GCCGCGGATCTCGATTGATTTCAGGgcgt                                                                    >  1:4937840/1‑100 (MQ=255)


                        tCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGgcgt                                                                    <  1:2843922/101‑2 (MQ=255)


                           aaTTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTcc                                                                 <  2:3788051/101‑1 (MQ=255)


                            aTTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCa                                                                >  1:4729026/1‑101 (MQ=255)


                            aTTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCa                                                                >  2:145897/1‑101 (MQ=255)


                            aTTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCa                                                                <  2:5223573/101‑1 (MQ=255)


                            aTTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCa                                                                <  1:5082329/101‑1 (MQ=255)


                            aTTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCa                                                                <  1:12483/101‑1 (MQ=255)


                              tttGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGt                                                              <  2:4832376/101‑1 (MQ=255)


                               ttGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTg                                                             >  1:4851188/1‑101 (MQ=255)


                               ttGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTg                                                             >  2:2517470/1‑101 (MQ=255)


                                  cGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTa                                                          <  1:4565004/101‑1 (MQ=255)


                                  cGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTa                                                          <  2:207619/101‑1 (MQ=255)


                                   gTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTaa                                                         >  2:376500/1‑101 (MQ=255)


                                     ccGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAg                                                       <  2:4676392/101‑1 (MQ=255)


                                     ccGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAg                                                       <  2:2756097/101‑1 (MQ=255)


                                      cGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAgg                                                      >  1:2230022/1‑101 (MQ=255)


                                       ggATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGa                                                     >  1:1450875/1‑101 (MQ=255)


                                       ggATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGa                                                     <  2:355678/101‑1 (MQ=255)


                                           aCCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGcac                                                 >  2:4066556/1‑101 (MQ=255)


                                           aCCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGcac                                                 >  2:3474529/1‑101 (MQ=255)


                                             cGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACAt                                               >  1:1174122/1‑101 (MQ=255)


                                             cGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACAt                                               >  2:5178177/1‑101 (MQ=255)


                                              gTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATc                                              <  2:4475039/101‑1 (MQ=255)


                                              gTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATc                                              >  2:5619751/1‑101 (MQ=255)


                                               tGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCa                                             >  2:2410056/1‑101 (MQ=255)


                                                  ggATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCg                                          >  1:449569/1‑101 (MQ=255)


                                                  ggATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCg                                          <  2:3066240/101‑1 (MQ=255)


                                                   gATGGCCGAGAAAATTCAGGCATTTGTCGGCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGc                                         <  2:1721941/101‑1 (MQ=255)


                                                    aTGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGcc                                        >  1:682404/1‑101 (MQ=255)


                                                    aTGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGcc                                        >  2:1577409/1‑101 (MQ=255)


                                                     tGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCa                                       >  2:3300738/1‑101 (MQ=255)


                                                      gggCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCaa                                      <  2:5486639/101‑1 (MQ=255)


                                                       ggCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCaaa                                     <  1:185298/101‑1 (MQ=255)


                                                       ggCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCaaa                                     >  2:76273/1‑101 (MQ=255)


                                                       ggCGAGAAAATTCAGGCATGTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTCAAGGAGCACATCACCGCCaaa                                     <  1:3275832/101‑1 (MQ=255)


                                                         cGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAAt                                   <  2:4192360/101‑1 (MQ=255)


                                                         cGAAAAAATTCAGGCATTTGTCGTCCCCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAAt                                   <  1:5217867/101‑1 (MQ=255)


                                                          gagaAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATg                                  >  2:460023/1‑101 (MQ=255)


                                                          gagaAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATg                                  <  2:2043380/101‑1 (MQ=255)


                                                          gagaAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATg                                  <  1:1733504/101‑1 (MQ=255)


                                                          gagaAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATg                                  <  2:1257732/101‑1 (MQ=255)


                                                          gagaAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATg                                  <  2:1174041/101‑1 (MQ=255)


                                                           agaAAATTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGa                                 <  1:965080/101‑1 (MQ=255)


                                                             aaaaTTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGAcg                               >  1:1316940/1‑101 (MQ=255)


                                                              aaaTTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGAcgg                              >  2:3352719/1‑101 (MQ=255)


                                                              aaaTTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGAcgg                              <  1:2768075/101‑1 (MQ=255)


                                                               tcttCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGAcggc                             <  2:3184867/99‑1 (MQ=255)


                                                               aaTTCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGAcggc                             >  1:4777088/1‑101 (MQ=255)


                                                                 ttCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGAcggcgg                           >  1:364210/1‑101 (MQ=255)


                                                                  tCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGa                          <  1:3510504/101‑1 (MQ=255)


                                                                  tCAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCAGa                          >  1:3185056/1‑101 (MQ=255)


                                                                   cAGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGAc                         >  2:846178/1‑101 (MQ=255)


                                                                    aGGCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACt                        <  2:5728355/101‑1 (MQ=255)


                                                                      gCATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGa                      <  1:4404969/101‑1 (MQ=255)


                                                                       cATTTGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGaa                     >  1:1140304/1‑101 (MQ=255)


                                                                         tttGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAAcc                   >  1:1555947/1‑101 (MQ=255)


                                                                          ttGTCGTCACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCt                  >  2:4429152/1‑101 (MQ=255)


                                                                            gtcgtcACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTaa                >  1:3466568/1‑101 (MQ=255)


                                                                               gtcACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.aa            >  2:3662542/1‑100 (MQ=255)


                                                                                tcACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.aac           >  2:673888/1‑99 (MQ=255)


                                                                                tcACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.aac           >  1:1821094/1‑99 (MQ=255)


                                                                                tcACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.aac           <  2:4731598/101‑3 (MQ=255)


                                                                                tcACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.aac           >  1:2067749/1‑99 (MQ=255)


                                                                                 cACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.aacg          >  2:1305418/1‑98 (MQ=255)


                                                                                 cACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.aacg          >  1:197475/1‑98 (MQ=255)


                                                                                 cACCCTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.aacg          <  2:4362038/101‑4 (MQ=255)


                                                                                  ccccTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.aacgg         <  1:5723366/100‑5 (MQ=37)


                                                                                   cccTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.aacggg        >  2:2694374/1‑96 (MQ=37)


                                                                                    ccTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAGAACgggg        >  2:190066/1‑101 (MQ=37)


                                                                                     cTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAGAACGGGGa       <  1:816607/101‑1 (MQ=37)


                                                                                     cTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAGAACGGGGa       >  2:3914717/1‑101 (MQ=37)


                                                                                     cTCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAGAACGGGGa       <  2:616646/101‑1 (MQ=37)


                                                                                      tCCGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAGAACGGGGAc      <  2:2900522/101‑1 (MQ=37)


                                                                                       ccGAAACCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAGAACGGGGACa     <  1:3768011/101‑1 (MQ=37)


                                                                                          aaaCCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAGAACGGGGACAGTc  >  2:1780878/1‑101 (MQ=37)


                                                                                          aaaCCT.GCCGCGGATCTCGATTGATTTCAGGGCGTTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAGAACGGGGACAGTc  >  2:2269736/1‑101 (MQ=37)


CGCCATGAAATATATGGATATAATTCGAATTTTGCGTCCGGATACCGTGCGGATGGGCGAGAAAATTCAGGCATTTGTCGTCACCCTCCGAAACCTCGCCGCGGATCTCGATTGATTTCAGGGCGCTCCAGTGGTAAAGGAGCACATCACCGCCAAAATGACGGCGGACTGAACCTAAG.ACGGGGACAGTC  >  NC_014034/2162299‑2162489

Base quality scores:


ATCG

< 3 ≤


ATCG

< 25 ≤


ATCG

< 31 ≤


ATCG

< 35 ≤


ATCG

< 41 ≤


ATCG