| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 432,469 | Δ1 bp | 3.5% | intergenic (+72/+76) | RCAP_rcc00403 → / ← RCAP_rcc00404 | hypothetical protein/Sua5/YciO/YrdC/YwlC family protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 432,469 | 0 | T→. | 3.5% | 15.0 ‑1.9 ‑0.9 | 231 | intergenic (+72/+76) | RCAP_rcc00403/RCAP_rcc00404 | hypothetical protein/Sua5/YciO/YrdC/YwlC family protein |
| Reads supporting (aligned to +/- strand): new base (6/2): ref base (100/123): total (106/125) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.47e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.24e-01 | ||||||||||
Only 100 of 257 total aligned reads displayed.
GCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGT.CTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCGCGGCGCGGCGGCGCG > NC_014034/432370‑432568
|
gCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.At < 2:1792117/101‑1 (MQ=255)
tttCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATcc < 2:2640957/101‑1 (MQ=255)
ttCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGGCCCCCGTCCTGCGGACTCCACCCGGGATATTTGACGCAAGATGAAAGCCG.ATCCg > 2:1435540/1‑101 (MQ=21)
tCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCgg < 2:3724479/101‑1 (MQ=255)
tCGGCGGCGGAGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCgg < 1:5488654/101‑1 (MQ=255)
cggcggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCcgg > 1:4454289/1‑101 (MQ=255)
gcggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCt > 1:245205/1‑101 (MQ=255)
cggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCtt > 1:1616403/1‑101 (MQ=255)
ggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTc < 1:3723534/101‑1 (MQ=255)
ggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTc < 2:5337111/101‑1 (MQ=255)
ggcggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTc < 2:4410641/101‑1 (MQ=255)
cggcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGt < 2:4833880/101‑1 (MQ=255)
gcggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGttt < 1:4640541/101‑1 (MQ=255)
cggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTc < 1:331890/101‑1 (MQ=255)
cggGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTc < 2:5083619/101‑1 (MQ=255)
gggCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCa < 1:3521478/101‑1 (MQ=255)
gggCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCa > 1:2702692/1‑101 (MQ=255)
ggCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCAt < 2:59371/101‑1 (MQ=255)
ccACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCt < 1:5462761/101‑1 (MQ=255)
cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCtt > 1:4331278/1‑101 (MQ=255)
cACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCA.ATCCGGGCTTCGTTTCATCtt < 1:4265961/101‑1 (MQ=255)
gCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGcc > 2:2341191/1‑101 (MQ=255)
tGAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCa > 1:2663333/1‑101 (MQ=255)
gAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCaa > 1:1304300/1‑101 (MQ=255)
gAGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCCGGGTATTTGAGGCAAGATGAAAACCG.ATCCGGGGTTCGTTTCTTTTTTccccca > 1:3946796/1‑99 (MQ=17)
aGGCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCaaa < 2:1015197/101‑1 (MQ=255)
ggCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAat < 1:91761/101‑1 (MQ=255)
ggCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAat < 2:4677033/101‑1 (MQ=255)
gCCGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAata < 1:964165/101‑1 (MQ=255)
gcGGGCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGTGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAatat < 2:3785604/100‑1 (MQ=255)
gggCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGGAATTTGGGTCAAGATGAAAGCCG.ATGCGGGCTTCGGTTCATCTTGCCCCCAATAA.cc > 1:3983753/1‑101 (MQ=18)
gggCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.cc < 2:735686/101‑1 (MQ=255)
gggCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATAGTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTTATCTTGGCCCGAATAT.cc > 2:1591596/1‑101 (MQ=18)
ggacggggggCTCTGCCCCCCGG.CTTCG..CTCCCCCCGGGATATTTGCGGCAAGATGAA....G.....GGGCATGATTTCATCTTGCCCGAAATAT.CCCAGGGGTGAAtt > 2:4111636/5‑101 (MQ=2)
ggCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.ccc < 1:1872491/101‑1 (MQ=255)
ggCAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.ccc < 1:2231118/101‑1 (MQ=255)
cAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCgg > 2:4528731/1‑101 (MQ=255)
cAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCgg < 2:2820545/101‑1 (MQ=255)
cAGGGGGGCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCgg > 1:1485863/1‑101 (MQ=255)
acggggggCTCTGCCCCCCGG.CTTCG..CTCCCCCCGGGATATTTGCGGCAAGATGAA....G.....GGGCATGATTTCATCTTGCCCGAAATAT.CCCAGGGGTGAAttgg > 1:5550287/3‑99 (MQ=2)
cggggggCTCTGCCCCCCGG.CTTCG..CTCCCCCCGGGATATTTGCGGCAAGATGAA....G.....GGGCATGATTTCATCTTGCCCGAAATAT.CCCAGGGGTGAAttggc > 2:135129/2‑98 (MQ=2)
ggggggGCCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCgggg < 1:767491/101‑1 (MQ=25)
ggggggCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCCAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCACATAT.CCCgggg > 1:466918/1‑101 (MQ=25)
ggggggCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCgggg > 1:2562656/1‑101 (MQ=255)
gggggCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCggggg > 2:4166106/1‑101 (MQ=255)
gggCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAAGCG.ATCCGGGCTTCGTTTCATCTTGCCCCCAATAT.CCCcgggggg > 1:1046620/1‑99 (MQ=21)
ggCTCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGa < 2:1327564/101‑1 (MQ=255)
ggCGCTGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCCAGATGAAAGCCG.ATCCGGGCTNCGNTNCNTCTTGCCCCCANTAT.CCCGGGGGGGa > 1:4984814/1‑101 (MQ=21)
tGCCCCCCGTCCTGCGGACTCCCCCCGGGGTATTTTAGGGAAAATGAAAACCG.GACCCGGGTTCGGTTTCTCTTTCCCCCCATATCCCCGGGGGGGAAttt > 1:45685/1‑101 (MQ=2)
tGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAAtttt < 2:5474506/101‑1 (MQ=255)
tGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAAtttt < 1:5011224/101‑1 (MQ=255)
tGCCCCCCGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAAtttt > 2:2471759/1‑101 (MQ=255)
ccccccGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTgg < 1:3177913/101‑1 (MQ=255)
ccccccGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTgg > 1:1761281/1‑101 (MQ=255)
ccccGTCCTGCGGACTCCCCCCGGGGTATTTTAGGGAAGATGAAAGACG.ATCCCGGCTTCGTTTTATCTTTCCCCCAACAT.CCCCGGGGGGAATTTTgggc > 2:1136278/1‑99 (MQ=16)
ccccGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGgcg < 2:1991723/101‑1 (MQ=255)
ccccGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGgcg < 2:5673966/101‑1 (MQ=255)
cccGTCCTGCGGACTCCCCCCGGGGAATTTTAGGGAAAAAGAAAACCGAACCCGGGCTTCGTTTCTTTTTCCCCCAAAATC.CCCGGGGGGGATttttttgc > 1:16629/1‑97 (MQ=255)
cccGTCCTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGgcgc < 2:4025565/101‑1 (MQ=255)
cgtccTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAg > 1:3652063/5‑101 (MQ=255)
gtccTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGc < 2:2874959/98‑1 (MQ=255)
gtccTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGc < 2:692784/98‑1 (MQ=255)
ccTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCa > 2:4313518/2‑101 (MQ=255)
ccTGCGGACTCCCCCCGGGATATTTGAGGCAAGAGGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCa < 2:3523564/100‑1 (MQ=255)
cTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCaa < 2:4873870/101‑1 (MQ=255)
tGCGGCCTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCaaa < 2:3983509/101‑1 (MQ=255)
aCTCCCCCCGGGATATTTCAGGCAAGATGAAAGGCG.ATCCGGGCTTGGTTTCATCCTGCCCCAAATAT.CCCGGGGGGGAATTTTGGCGCAGCCAAAAGAgg > 2:5183687/1‑101 (MQ=18)
ccccccGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAggggg < 1:4166356/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCa < 2:3313220/101‑1 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCa > 2:2404996/1‑101 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCa < 1:656074/101‑1 (MQ=255)
cccGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGTCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGTGGCAg < 2:1540510/101‑1 (MQ=255)
ccGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAgc < 2:563656/101‑1 (MQ=255)
ccGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAgc < 2:213266/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAgcgc > 1:2400090/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcc > 1:5280629/1‑101 (MQ=255)
ggATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcc < 1:3037461/101‑1 (MQ=255)
atatTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcccc < 2:1761182/101‑1 (MQ=255)
atatTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCAGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcccc > 1:2095129/1‑101 (MQ=255)
tatTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGccccc < 2:4556665/101‑1 (MQ=255)
atTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCt > 1:2022021/1‑101 (MQ=255)
ttGAGGCAAGATGAAAGCCG.GTCCGGGCTTCGTTTCATCTTGCCCCAAATTT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTAt < 1:2412119/101‑1 (MQ=255)
aGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTTAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATccc < 2:1690052/101‑1 (MQ=255)
ggCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATcccc < 1:4493856/101‑1 (MQ=255)
ggCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATcccc > 1:3183576/1‑101 (MQ=255)
gCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcg < 1:1560460/101‑1 (MQ=255)
gCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcg > 2:4994585/1‑101 (MQ=255)
aaGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcg < 1:5561719/101‑1 (MQ=255)
aGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcgg > 2:2697940/1‑101 (MQ=255)
aTGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAACGAGGGGGCACCGCCCCCTATCCCcccgccg > 2:1887502/1‑101 (MQ=25)
gAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggcgcg > 1:5083847/1‑101 (MQ=255)
gAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggcgcg > 2:2991101/1‑101 (MQ=255)
aaGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCcgcggccgcgc > 1:1027197/1‑96 (MQ=255)
aaGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggc > 1:5770408/1‑101 (MQ=255)
aaGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGGGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggc > 1:5579080/1‑101 (MQ=255)
aGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggcg < 2:3137237/101‑1 (MQ=255)
cG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggcggcg > 2:3427831/1‑101 (MQ=255)
g.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggcggcgc > 1:1369795/1‑101 (MQ=255)
g.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggcggcgc > 1:4496320/1‑101 (MQ=255)
aTCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCgcggcgcggcggcgcg > 2:3605901/1‑101 (MQ=255)
|
GCTTTCGGCGGCGGCGGGCCACGCCTGAGGCCGGGCAGGGGGGCGCTGCCCCCCGT.CTGCGGACTCCCCCCGGGATATTTGAGGCAAGATGAAAGCCG.ATCCGGGCTTCGTTTCATCTTGCCCCAAATAT.CCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTATCCCCGCGGCGCGGCGGCGCG > NC_014034/432370‑432568
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|