Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_014034 | 985,690 | Δ1 bp | 100% | intergenic (+29/‑55) | betB → / → betA | betaine‑aldehyde dehydrogenase/choline dehydrogenase |
Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_014034 | 985,690 | 0 | C→. | 100.0% | 60.4 | 144 | intergenic (+29/‑55) | betB/betA | betaine‑aldehyde dehydrogenase/choline dehydrogenase |
Reads supporting (aligned to +/- strand): new base (22/100): ref base (18/0): total (42/102) | ||||||||||
Fisher's exact test strand distribution p-value = 5.32e-12 | ||||||||||
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.96e-12 |
Only 100 of 194 total aligned reads displayed.
GCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGCCGGTCCCCCCCCGG.ACCCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGG > NC_014034/985590‑985785
|
gCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCGCCGG.Ac > 2:2513724/1‑101 (MQ=255)
gcgATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGGCCCCCCCGG.Tcccc > 1:1927414/1‑101 (MQ=255)
cgATCGTGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.Accccc < 1:949449/101‑1 (MQ=255)
gATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.Acccccc > 2:4249401/1‑101 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.Accccccg < 2:5518169/101‑2 (MQ=255)
aTCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.Accccccg < 1:5771196/101‑2 (MQ=255)
tCGAGCACTATTCGCTGTTGACGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACTCAGGCC.GGTGGGTCCCCCCCCGG.Tccccccgg < 2:4813100/101‑3 (MQ=255)
tCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.Accccccgg < 2:4765500/101‑3 (MQ=255)
tCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.Accccccgg < 1:5260741/101‑3 (MQ=255)
tCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.Accccccgg < 1:75089/101‑3 (MQ=255)
tCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.Accccccgg < 1:2714339/101‑3 (MQ=255)
cGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.Accccccggc < 2:1351746/101‑4 (MQ=255)
cGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGGCCCCCCCCG.Accccccccc > 1:4693251/1‑99 (MQ=255)
cGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.GCCCCCCCgc > 1:3357499/1‑100 (MQ=255)
cGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCC.GCCCCCCCgc > 1:4429772/1‑100 (MQ=255)
gAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCCG.GCCCCCCCgcg > 2:3667130/1‑99 (MQ=255)
gAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.ACCCCCCCgcg > 1:1832200/1‑99 (MQ=255)
aGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGt < 1:1670752/101‑1 (MQ=255)
gCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGG.CCCCCCCCgcgga > 2:4250265/1‑97 (MQ=255)
cACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.Accccccggcggat > 2:5792222/1‑94 (MQ=255)
cACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTAt < 1:5108114/101‑1 (MQ=255)
cACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGGCCCCCCCCC.GCCCCCCCgcgcgt > 1:5316002/1‑96 (MQ=255)
cACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGG.Accccccggcggat > 2:3805289/1‑94 (MQ=255)
aCTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTGCCCCCCCGC.GCCCCCCCgcgcatt > 2:2292097/1‑95 (MQ=255)
cTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTAttt < 1:5082362/101‑1 (MQ=255)
cTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTAttt < 1:832033/101‑1 (MQ=255)
tataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGGGCCCCCCCCG.CCCCCCCCCGCgcttt > 1:2118867/1‑97 (MQ=255)
tataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGACCATATTGAAACGAAGGCCGGGGGGGGACCCCCCCGGCACCCCCGCgggtttt > 1:4312271/1‑96 (MQ=255)
ataCGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCCGGGGGGGGCCCCCCCCCG.Ccccccccccgcttttg > 1:3082185/1‑92 (MQ=255)
cGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.A.CCCCCCGGCGGATTTGCGcc > 2:3235768/1‑101 (MQ=255)
aGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAg < 2:1603706/101‑1 (MQ=255)
aGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGGCCCCCCCCG.GCCCCCCC.GCGGATTTGCGCCAAg > 1:3604843/1‑101 (MQ=255)
aGGTGAAGGCCGTCGATGTCGGCATGGGGCCGGGCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAg < 2:1916966/101‑1 (MQ=255)
gTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGaa < 1:1507264/101‑1 (MQ=255)
tGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.GCCCCCCC.GCGGATTTGCGCCCAGaaa > 1:892380/1‑101 (MQ=255)
ggAAGGCCGTCTATGTCGGCAGGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGaaa < 2:1799087/100‑1 (MQ=255)
aaGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.GCCCCCCC.GCGGATTTTGGCCCACaaaaa > 2:2295853/1‑101 (MQ=255)
aaGGCCGTCTATGTCGGCATGGGGCCGGTCAAGAGCCCCTATTGAATCGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGaaaaa < 2:4782019/101‑1 (MQ=37)
aaGGCCGTCTATGTCGGCATGGGGACGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGaaaaa < 1:3713559/101‑1 (MQ=38)
aGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGTGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGaaaaaa < 2:4026840/101‑1 (MQ=255)
ggCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAAc < 1:1937014/101‑1 (MQ=255)
gCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACa < 1:1136163/101‑1 (MQ=255)
ccGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAg < 1:3235968/101‑1 (MQ=255)
ccGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGACCCCCCCGG..GACCCCCGCCGTATTTGAGCCAAGAAAAAACaa > 2:1306918/1‑100 (MQ=25)
gTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG..GCCCCCCGGCGGATTTGCGGCAAGAAAAAACAggg > 2:3453396/1‑101 (MQ=255)
gTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGG.ACCCCCCC.GCGTATTTGCGCCCAGAAAAAAAAggg > 2:5181725/1‑101 (MQ=255)
tCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGt < 2:1742172/101‑1 (MQ=255)
aTGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCa < 1:2604771/101‑1 (MQ=255)
aTGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.GCCCCCCCGCGGCTTTTGGCCCAGAAAAAAAAAGGGttg > 1:2183292/1‑100 (MQ=255)
aTGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCC.GCCCCCCCGGCGCATTTG.GCCCAGaaaaaaaaagcggca > 1:1378761/1‑92 (MQ=255)
aTGGCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCa < 2:2871045/101‑1 (MQ=38)
tGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAg < 2:660681/101‑1 (MQ=255)
gTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAgg < 1:1312761/101‑1 (MQ=255)
gTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAgg < 2:719436/101‑1 (MQ=255)
tCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGc < 1:555580/101‑1 (MQ=255)
gctgggggCCGGTCGAGAGCCCCTATTGAATCGCAGGCC.GGGGGGTCCCCCCCCGG..TCCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCaga < 1:938127/97‑1 (MQ=38)
gCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCaga < 1:704830/101‑1 (MQ=255)
cATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.ACCCCCCC.GCGGATTTGCGCCCAGAAAAAACAGGGGTCAGGCagag > 1:2886947/1‑101 (MQ=255)
tGGGGCCGGTCGAGAGCCGCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAggg < 2:1927306/101‑1 (MQ=38)
tGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGGCCCCCCCCG.GCCCCCCCGCCCGTTTTGGCCCAAAAAAAAAAAGGG.TCAGGGAGAggg > 2:1988392/1‑101 (MQ=255)
gCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGG.A.CCCCCCGGCGGATTTGCGCCAAGAAAAAACAGGGTTAAGGCAGAGGGTggc > 2:3879514/1‑101 (MQ=255)
cGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.CCCCCCCCGCCGATTTTGC.CCCAGAAAAAAAAGGGGTCAAGCAGAGGGAcgcgc > 2:814598/1‑101 (MQ=255)
ggTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTcgcgcg < 2:1059480/101‑1 (MQ=255)
ggTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGCATTTCCGCCACGAAAAACAAGGGTGCGGGCGGGggggggcggg > 1:5589741/1‑94 (MQ=255)
ggTCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGG.GCCCCCCC.GCGTATTTTTGGCCAGAAAAAAAAAGGGTCAGGCAGAGGGGggcgcg > 1:1615422/1‑101 (MQ=255)
tCGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgat < 1:3488737/101‑1 (MQ=255)
gcGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGGGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgat < 1:3667358/100‑1 (MQ=38)
gcGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgat < 1:2769326/100‑1 (MQ=39)
cGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatg < 2:2118750/101‑1 (MQ=255)
cGAGAGCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatg < 2:4692970/101‑1 (MQ=255)
agagCCCCTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCgatgga < 2:3166436/101‑1 (MQ=255)
agCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGG.ACCCCCCC.GCCAATTTGCGCCAAAAAAAAAAAGGGCACAGGCAGGGGGGCGCGCgttgggag > 1:3722339/1‑98 (MQ=255)
agCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.A.CCCCCCGGCGGATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGGCGCGCgatggatg > 2:1518612/1‑101 (MQ=255)
gCCCCTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCCG.ACCCCCCC.GCGGATTTGCGCCCAGAAAAAAAAGGGGTCAGGCAGAGGGGCGCGGgatgggtgg > 2:3038040/1‑100 (MQ=255)
cccTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCgg < 2:5723171/101‑1 (MQ=255)
ccTATTGAAACGCAGGCC.GGGGGGGCCCCCCCCGG.ACCCCCCC.GCGGCCTTTCGCCCAGAAAAAACAGGGGTCAGGCAGAGGGGCGCGCGCTGGATGCggg > 1:2570237/1‑100 (MQ=255)
cTATTGAAACGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGAt < 1:4442636/101‑1 (MQ=255)
aTTGAACCGC.GGCC.CGGGGGGCCCCCCCCGG..GCCCCCCGGCGTTATTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTAt < 2:5589449/101‑1 (MQ=255)
aaaCGCAGGCC.GGGGGGGCCCCCCCCGG.ACCCCCCC.GCGGATTTTCGCCAAGAAAAAAAAGGGGTCAGGCAGAGGGGCGGGCGATGGGTGGGGATTAtgtg > 2:1249947/1‑101 (MQ=255)
aCGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGAt < 1:1734386/101‑1 (MQ=255)
cGCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATc < 2:3604615/101‑1 (MQ=255)
gCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCg < 2:4429500/101‑1 (MQ=255)
gCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCg < 1:5464107/101‑1 (MQ=255)
gCAGGCC.GGGGGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCg < 1:4250525/101‑1 (MQ=255)
ggcc.ggggGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTg > 1:2458608/1‑101 (MQ=255)
ggcc.ggggGGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTg < 2:4561970/101‑1 (MQ=255)
gcc.gggggGTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTgg < 2:4056662/101‑1 (MQ=255)
gccggggtgccccccccCG.GGCCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTgg < 1:39366/92‑1 (MQ=38)
ccggggggTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTggg < 1:4376902/95‑1 (MQ=255)
cggggggTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTgggg < 2:3716922/96‑1 (MQ=255)
cggggggTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTgggg < 1:2295979/96‑1 (MQ=255)
ggggggTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCGGAGGGCCGCGCGATGGATGCGGATTATGTGATCGTTGGGGc > 1:3837291/5‑101 (MQ=38)
gTCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAAAAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGGAGGcc > 2:3327072/1‑100 (MQ=39)
tCCCCCCCCGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTc < 1:3307221/101‑1 (MQ=255)
tCCCCCCCCAG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTc < 1:5366042/101‑1 (MQ=255)
gccccccccGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGCTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTc < 2:2953406/100‑1 (MQ=255)
cccccGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCgggg > 1:951266/1‑100 (MQ=255)
cccccGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGggc < 2:4337812/101‑1 (MQ=255)
ccccGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGggcg > 2:1428884/1‑101 (MQ=255)
cccGG.A.CCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGggcgg > 2:1084681/1‑101 (MQ=255)
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GCCGCGATCGAGCACTATACGCAGGTGAAGGCCGTCTATGTCGGCATGGGGCCGGTCGAGAGCCCCTATTGAAACGCAGGCC.GGCCGGTCCCCCCCCGG.ACCCCCCCGGCGTATTTGCGCCAAGAAAAAACAGGGTTCAGGCAGAGGGTCGCGCGATGGATGCGGATTATGTGATCGTTGGGGCAGGCTCGGGCGG > NC_014034/985590‑985785
Base quality scores: 
ATCG
< 3 ≤
ATCG
< 12 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|