| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,193,628 | +GGG | 100% | intergenic (+93/‑158) | metK → / → trmB | methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,193,628 | 1 | .→G | 100.0% | 25.1 | 11 | intergenic (+93/‑158) | metK/trmB | methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase |
| Reads supporting (aligned to +/- strand): new base (0/11): ref base (0/0): total (0/11) | ||||||||||
| * | NC_014034 | 1,193,628 | 2 | .→G | 100.0% | 25.1 | 11 | intergenic (+93/‑158) | metK/trmB | methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase |
| Reads supporting (aligned to +/- strand): new base (0/11): ref base (0/0): total (0/11) | ||||||||||
| * | NC_014034 | 1,193,628 | 3 | .→G | 100.0% | 25.1 | 11 | intergenic (+93/‑158) | metK/trmB | methionine adenosyltransferase/tRNA (guanine‑N(7)‑)‑methyltransferase |
| Reads supporting (aligned to +/- strand): new base (0/11): ref base (0/0): total (0/11) | ||||||||||
GGTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...GGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGCCAAGGAAAAGCGCAAGACCGGG > NC_014034/1193529‑1193685
|||
ggTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCcgcc > 1:2304018/1‑100 (MQ=255)
ggTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCcgc...g < 2:2464953/101‑1 (MQ=255)
ggTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCcgc...g < 1:3793295/101‑1 (MQ=255)
gTCGGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...gg < 2:1112491/101‑1 (MQ=255)
tCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggg < 1:2732047/101‑1 (MQ=255)
tggAGCCGTTTTCAAAAGATCGGGGGGAGGGGGGCTTCGCC.CCCTTTTTTCATGCGTTGCAGGATTTTCCGCCTCGGGCAAGCCCGAGGCGACCCGC...gggg < 2:145291/99‑2 (MQ=25)
ggAGCCGGTTTCAAAAGATCACGGGGAGGGGGGCTTCGGC.CCCCTTTTTCATGCGTGCCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggggg < 2:3208755/100‑3 (MQ=38)
ggCCGGTTCAAAAAGATCGGGGGGAGGGGGGTTTCGCC.CCCTTTTTTCATGCGTTGCAGAATTTTCCGCCTCGGGCAAGCCCGGGGCGACCCGC...ggggggc < 2:2675/100‑5 (MQ=16)
aGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCcgccgtcacc > 1:4365489/1‑94 (MQ=255)
aGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggggggc < 2:1013197/101‑5 (MQ=255)
cgggTTTCAAAAGATCGCGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATTTTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggggggctc < 1:62431/99‑7 (MQ=37)
ccGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCTC...ggggggctc < 2:3404920/101‑7 (MQ=255)
cGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggggggctcc < 1:4547311/101‑8 (MQ=255)
cGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...ggggggctcc < 2:3586099/101‑8 (MQ=255)
cGGTTTAAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTGGCAGGATATTTCGCCTCGGGCAAGCCCGGGGCGACCCGC...ggggggctcc < 2:5570630/101‑8 (MQ=37)
aaaaGATCGCGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATTTTCCGCCTCGGGCAAGCCGGGGGCGACCCGCGGGGGGCTCCGcccccc < 1:535113/101‑1 (MQ=21)
aaaaGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGcccccc < 2:2766481/101‑1 (MQ=25)
aaaaGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGcccccc < 1:541673/101‑1 (MQ=25)
aaaaGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGcccccc < 2:4643409/101‑1 (MQ=25)
gATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGCAc < 2:3680985/101‑1 (MQ=21)
gATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGCAc < 1:5085290/101‑1 (MQ=21)
cggggggAGGGGGCCTTCGGC.CCCTTTTTTCATGCGTGGCAGGATTTTCCCCCGGGGGAAACCCCGGGGCGCCCCGCGGGGGGCTCCGCCCCCCGCAcccc < 1:2924229/98‑1 (MQ=9)
ggggGAGGGGGCCTCCGCTCCCCTGTGTCATGGGTTGCAGTATTTTCCGCCCGGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGCAcccccc < 1:2318620/101‑1 (MQ=2)
gggAAGGGGGCTTCGCC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCgg < 2:4864209/101‑1 (MQ=18)
gaGGGGGCTTGGGC.CCCCTTTGTCAGGCTTTGCGGGATTTTTCGCCTCGGGCAAGCCGGAGGCGCCCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGCGt < 2:1937844/100‑1 (MQ=9)
tggCAGAATATTGCGCCGCGGGCACGCCCGCGGCGACCCGCGGGGGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGCCAAGGAAAAGCGCAAGACCggg < 2:1663926/99‑1 (MQ=11)
|||
GGTCTGAGCCGGTTTCAAAAGATCACGGGGAAGGGGGCTTCGGC.CCCCTTTTTCATGCGTTGCAGGATATTTCGCCTCGGGCAAGCCCGAGGCGACCCGC...GGGCTCCGCCCCCCGCACCCCCCGGCGTATTTTGCCAAGGAAAAGCGCAAGACCGGG > NC_014034/1193529‑1193685
Base quality scores:
ATCG
< 3 ≤
ATCG
< 7 ≤
ATCG
< 17 ≤
ATCG
< 27 ≤
ATCG
< 37 ≤
ATCG
|