| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,253,264 | +G | 61.9% | coding (240/2421 nt) | copA2 ← | copper‑transporting P‑type ATPase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,253,264 | 1 | .→G | 61.9% | 144.9 ‑3.0 ‑1.6 | 105 | coding (240/2421 nt) | copA2 | copper‑transporting P‑type ATPase |
| Reads supporting (aligned to +/- strand): new base (14/51): ref base (16/24): total (30/75) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.84e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.76e-02 | ||||||||||
Only 100 of 206 total aligned reads displayed.
CCGTGCCCTGCGCATAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAGGGTTTCCGCCCGCGCCGGG > NC_014034/1253164‑1253360
|
ccGTGCCCTGCGCATAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.ccgc.c < 1:1258385/101‑1 (MQ=255)
gTGCCCTGCGCATAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..gg < 1:5572927/101‑1 (MQ=255)
gTGCCCTGCGCATAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..gg > 2:4074410/1‑101 (MQ=255)
gTGCCCTGCGCATAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..gg > 2:3724194/1‑101 (MQ=255)
gCCCTGCGCATAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..gggg > 2:5135442/1‑101 (MQ=255)
ccTGCGCATAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..gggggg > 1:532136/1‑101 (MQ=255)
gcgcATAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..ggggggggg > 1:5200931/1‑101 (MQ=255)
gcgcATAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..ggggggggg > 1:1480419/1‑101 (MQ=255)
aTAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGC.Gt > 2:1051517/1‑101 (MQ=255)
aGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..gggggggggggggtc > 1:2356329/1‑96 (MQ=255)
ggcgcgGGCGCGGCCCGCGGGCAAAAGCAGGACCGAGAGCCCCCCGGGCGCCGCCTGCAGGCAGGACCCG.CCCC.TTG.CCGCGG..GGGGGGGGGGC.GTC.GAAg < 2:4863917/99‑1 (MQ=255)
gACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGC.GTC.GAAGc > 1:5445168/1‑101 (MQ=255)
aCGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GGC.GAAGc > 1:774282/1‑101 (MQ=255)
ggcggtgccgCCCCCCGGCAAAAGGCGGACCGGGAGCCCCCCGGGCGGGCCCCGCAGCCCCGCCCCG.GCCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGccc < 2:5787310/92‑1 (MQ=255)
gcgGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGccc > 2:2016034/1‑101 (MQ=255)
gggCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAg > 1:745068/1‑101 (MQ=255)
gggCGCGGCCCTCGGGCAAAAGCAGGACCGAGAGCCCCCCGGGCGTCCCCTGCAGCGCGGACCCG.ACCC.TGT.CCGCGG..GGGGGGGGGGC.GTC.GAAGCCCAg < 2:2943536/101‑1 (MQ=255)
ggggcTGCCCTCGGGCAAAAGCAGGGCCGAGAGCCCCCCGGGCGTCCCCTGCAGCGCGGACCCC.ACCC.TGT.CCCC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGa < 2:2467661/98‑1 (MQ=255)
ggCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGa > 1:4126467/1‑101 (MQ=255)
gcgcGGCCCCCGGGCAAAAGCAGGACCGAGAGCCCCCCGGGCGCCCCCGGCAGCGCGGACCCG.CCCC.TGT.CCCC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGAc < 1:3053236/101‑1 (MQ=255)
ggcggCCCCCGGGGAAAAGCAGGACCGAGAGCACCCCGGGGGGCTCCGGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACa < 1:5269770/97‑1 (MQ=255)
cgcTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGGGGACCCG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACa < 1:4613354/101‑1 (MQ=255)
cgcTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACa > 1:904714/1‑101 (MQ=255)
gcTGCCCTCGGGCAAAAGCAGGACCGAGAGCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAg < 1:5083630/101‑1 (MQ=255)
tGCCCGCGGGCAAAAGCAGGGCCGGGAGCCCCCCGGGCGCCGCCCGCGGCGGGGACCCC.CCCC.TGC.CCCC.CGGGGGGGGGGGGC.GTC.GAAGCCCAGACAgg < 2:697841/101‑1 (MQ=255)
gCCCTCGGGCAAAAGCAGGACCGAGAGCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.CCCC.TGT.CCGC.C..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGtct < 2:2415679/101‑1 (MQ=255)
gCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGG.GTC.GAGCCCCCGACAggcc > 2:1715853/1‑99 (MQ=255)
gCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAggcc > 2:3941687/1‑99 (MQ=255)
cccTCGGGAAAAAGCAGGACCGAGAGCCCCCCGGGCGTCCCCTGCAGCGCGGACACG.CCCC.TGT.CCCC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGtct < 1:690653/101‑1 (MQ=255)
cTCGGGCAAAAGCGGGACCGAGAGCCCCCCGGGCGTCCCCTGCGGCGGGGACACG.ACCC.TGC.CCCC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcg < 2:5261335/101‑1 (MQ=255)
cTCGGGCAAAAGCAGGACCGAGAGCCCCCCGGGCGTCGCCTGCAGCGCGGACCCG.GCCC.TGT.CCGC.C..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcgg < 1:5048380/101‑1 (MQ=255)
cTCGGGCAAAAGCAGGACCGAGAGCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcg < 1:1340383/101‑1 (MQ=255)
cTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcg > 1:5413552/1‑101 (MQ=255)
cGGGCAAAAGCAGGCCCGAAAGCACCCCGGTCGTTGCCTGCAGCGCGGGCCCG.ACCC.TGC.CCCC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcggc < 2:1913489/101‑1 (MQ=255)
gggCAAAAGCAGGGCCGAGAGCCCCCCGGGCGGCGCCGGCAGCGCGGACACG.ACCC.TGT.CCCC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcggcc < 1:917462/101‑1 (MQ=255)
ggCAAAAGCAGGACCGAGGGCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcggcct < 2:532086/101‑1 (MQ=255)
ggCAAAAGCAGGACCGAGAGCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.CCCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcggcct < 2:503698/101‑1 (MQ=255)
gCAAAAGCAGGACCGAGAGCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcggcctcg < 1:4108914/101‑1 (MQ=255)
cAAAAGCGGGCCCGAGAGCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.CCCC.TGT.CCCCGG..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcggcctcg < 1:2964620/101‑1 (MQ=255)
aaaaGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcggcccccg > 1:3667856/1‑97 (MQ=255)
taaGCAGGACCGCGAGCCCCCCGGGCCTCCCCGGCAGCCCGTTCACC.ACCC.TGT.CCTC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcggcctcggc < 1:4692778/100‑1 (MQ=255)
aaaGCAGGGCCGAAAGCCCCCCGGGCGTCGCCTGCAGCGCGGACCCG.CCCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTctcggcctcggc < 1:320260/101‑1 (MQ=255)
aaaGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGG.GTC.GAAGCCCAACCAGGCCCCGCCCCCGGC.a > 1:658059/1‑101 (MQ=255)
aaacAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CGGGGGGGGGGGGG.GGG.GAGGCCCAGAAAGGGctcggccccgga > 1:3295227/4‑100 (MQ=255)
aGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGG.GGCGGAAGCCCAGAAGGGTCTCGGCCCCGGC.aa > 1:1427364/1‑101 (MQ=255)
aGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGCGGGG.GAAGCCCGAACCGGTCTCGGCCTCGGG.aa > 1:5642405/1‑101 (MQ=255)
gagggACCGAGAGCGCCCCGGGCGTCGCCTGCGGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AAt < 1:3548449/98‑1 (MQ=255)
cAGGACCGAGAGCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.GCCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATc < 2:4802908/101‑1 (MQ=255)
aGGACCGAGAGCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCg < 1:1931221/101‑1 (MQ=255)
aGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AACCg > 2:548106/1‑101 (MQ=255)
ggACCGAGAGCCCCCCGGGCGTCCCCTGCAGCGCGGACCCG.CCCC.TGT.CCCC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCgg < 2:4191695/101‑1 (MQ=255)
ccGAGAGCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATa < 2:1488407/101‑1 (MQ=255)
cGAGAGCCCCCGGGGCGTCGCCGGCAGGGGGGACACG.CCCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAg < 1:1396859/101‑1 (MQ=255)
cGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGG.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAg > 2:5207546/1‑101 (MQ=255)
gagaGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAgc > 1:4313193/1‑101 (MQ=255)
gagCCCCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAgccc < 1:3447534/101‑1 (MQ=255)
gagCCCCCCGGGCCTCGCCTGCAGCGCGGACCCG.CCCC.TGG.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAgccc < 2:3799693/101‑1 (MQ=255)
agCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAgcccg > 1:1014738/1‑101 (MQ=255)
gccccccGGGCGTCCCCTGCAGCGCGGACACG.CCCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAgcccgc < 2:1821757/98‑1 (MQ=255)
gCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAgcccgcc > 2:2156782/1‑101 (MQ=255)
cccccGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAgcccgccc < 1:1955847/100‑1 (MQ=255)
ccccGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTGGGCCTCGGC.AATCGGAGACcccgcccg > 2:1889352/1‑101 (MQ=255)
ccccGGCCGCCGCCTGCAGCGCGAGCCCGCCCCC.TCC.CCCC.G..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGcccgcccg < 1:3098725/101‑1 (MQ=255)
cccGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGCCTCGGCCTCGGC.AATCGGATAGCCCGCCcccg > 2:536873/1‑101 (MQ=255)
cGGGCGTCGCCTGCAGCGCGGGCACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGG.GTC.GGAGGCCGGCCACGTCTAGGCCTGGGC.AATCGGACCGCCGGCCCgcgc > 2:2329770/1‑101 (MQ=255)
cGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GCC.GAACCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAgccccccccccc > 1:242092/1‑97 (MQ=255)
gggCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGG.GCC.GAGGCCCGAACGGGTCTGGGCCTCGCA.AATCGGAAAGCCCCCCCGCGcc > 2:3547301/1‑101 (MQ=255)
ggCGTCGCCTGCAGCGCGGACCCG.ACCC.TGT.CCCC.C..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAg < 2:5589830/101‑1 (MQ=255)
cGTCGCCTGCGGCGCGGACACG.CCCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAgc < 1:3744011/101‑1 (MQ=255)
cGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAgc > 2:5651131/1‑101 (MQ=255)
cGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCCCCCCCGCCCgc > 2:4651463/1‑101 (MQ=255)
gTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAACCCCAAACAGGCCCCGCCCTCGCC.AATCGGTAAGCCCCCCCGCCCCatcc > 1:302679/1‑98 (MQ=255)
tCGCCTGCCGCGCGGGCCGG.GCCC.TGTCCCGC.G..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAgcgc < 1:1701643/101‑1 (MQ=255)
cccccgccgggcgGACACG.ACCCTTGC.CCCC.G..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGcc < 2:2250118/91‑1 (MQ=255)
gCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGG.GTC.GAAGCCCAGAAAGGTCCCGGCCTCGGC.AATCGGAAAACCCCCCCCCGCCAACGcccc > 2:1561732/1‑99 (MQ=255)
ccTGCACCGCGGACCCG.CCCC.GGT.CCCC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTc < 2:3049797/101‑1 (MQ=255)
cggcggcgcGGACGCG.CCCC.TGT.CCGCGG..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCg < 1:38579/96‑1 (MQ=255)
cTGCAGCGCGGACCCG.ACCC.TGG.CCCC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCg < 2:4418229/101‑1 (MQ=255)
cgcgcGGACACG.CCCC.TGC.CCGG.G..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAg < 2:4411625/100‑1 (MQ=255)
cacgcgGACACC.ACCC.TGT.CCCC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCa < 1:1721999/99‑1 (MQ=255)
aGCGCGGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGG.GTC.GAAGCCCAGACAGGTCTCGGCCCCGGC.AATCGGAAAGCCCCCCCGCGCCCGCCCCCCGCccc > 2:2134342/1‑100 (MQ=255)
gcgcGGACCCG.CCCC.GGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAg < 2:3174195/101‑1 (MQ=255)
cgcgGACCCG.ACCC.TGC.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAgg < 2:1312824/101‑1 (MQ=255)
cgcgGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTT.GAACCCCCAACAGGCCTTGGCCCCGGC.AACCGGATACCCCGCCCGTGCCAGCCGCTCGCCCacg > 1:2131145/1‑99 (MQ=255)
cgGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGG.GCC.AAAGCCCAAAAAGGTCTGGGCC.CGGCAAACCGGAAACCCCGCCCGCGCCAGGCCCCCGGCAAGGGt > 2:2081036/1‑101 (MQ=255)
cgGACACG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGCCTCGGCCCCGGC.AATCGGAAAGCCCGCCCCCGCCAGCGCCCCGCCCAGGGt > 2:4352725/1‑101 (MQ=255)
gcccG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAGGGTTTc < 2:5749085/98‑1 (MQ=255)
acacG.ACCC.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGCCCCGGCCTCGGC.AATCGGATAGCCCCCCCCCCCCAGCCCCCCGGCCAGGGTTTc > 2:3001825/1‑101 (MQ=255)
cccgcccc.TGC.CCGC.GG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAGGGTTTcc < 2:4007310/96‑1 (MQ=255)
g.ACCC.TGT.CCGC.C..GGGGGGGGGGC.GCC.GAAACCCAGACAGGTCCCGGCCTCGGC.ACTCGGATAGCCCGCCCGCGCCCCCGCCCCGGCCAGGGATTccgccc > 1:3960505/1‑101 (MQ=255)
cgcccc.TGT.CCGCGG..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAGGGTTTccgc < 2:3225564/98‑1 (MQ=255)
cgcccc.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAGGGTTTccgc < 1:2792336/98‑1 (MQ=255)
gccc.TGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAGGGTTTccgccc < 1:2622681/100‑1 (MQ=255)
tGT.CCGC.CG.GGGGGGGGGGG.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AACCGGATAGCCCGCCCGCGCCAGCGCCCCGGCCAGGGTTTCCGCCCgcgc > 2:3887116/1‑101 (MQ=255)
tGT.CCGC.CG.GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAGGGTTTCCGCCCccgc > 1:1089397/1‑101 (MQ=255)
tGT.CCGC.C...GGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAGGGTTTCCGCCCGCGCCg > 1:1793813/1‑101 (MQ=255)
gT.CCGC.CG.GGGGGGGGGGC.GCC.GAACCCCCGACAGGTCTCGGCCTCGGC.AACCGGATGACCCACCCGCGCCAACGCGCAGGCCAGGGGTTCCGCCCGCGcc > 2:1359369/1‑101 (MQ=255)
gT.CCGC.C..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCCCCCCGGCCGGGGTTTCCGCCCGGGCCg > 2:4482499/1‑101 (MQ=255)
ccgc.cg.GGGGGGGGGGG.GTC.GGAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCCGCGCCTCGGCCAGGGTTTCCGCCCCCGCCgg > 1:4266116/1‑101 (MQ=255)
cccc.c..gGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAGGGTTTCCGCCCGCGCCggg < 2:3068474/98‑1 (MQ=255)
|
CCGTGCCCTGCGCATAGGTGACGCGGGCGCTGCCCTCGGGCAAAAGCAGGACCGAGAGCACCCCGGGCGTCGCCTGCAGCGCGGACACG.ACCC.TGT.CCGC.C..GGGGGGGGGGC.GTC.GAAGCCCAGACAGGTCTCGGCCTCGGC.AATCGGATAGCCCGCCCGCGCCAGCGCCTCGGCCAGGGTTTCCGCCCGCGCCGGG > NC_014034/1253164‑1253360
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 27 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|