| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,303,827 | +C | 1.7% | intergenic (+14/+143) | urtE → / ← RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,303,827 | 2 | .→C | 1.7% | 4.5 ‑1.2 ‑0.1 | 239 | intergenic (+14/+143) | urtE/RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Reads supporting (aligned to +/- strand): new base (3/1): ref base (97/138): total (100/139) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.11e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.40e-01 | ||||||||||
Only 100 of 258 total aligned reads displayed.
TATGTGCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CT.C..C..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGCC > NC_014034/1303727‑1303921
|
tATGTGCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTg < 1:127718/101‑1 (MQ=255)
tgtgCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..c.c < 2:927614/101‑1 (MQ=255)
tgCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..c.ccc < 2:1521344/101‑3 (MQ=255)
tgCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..c.ccc < 1:1415603/101‑3 (MQ=255)
tgCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..c.ccc > 1:4345237/1‑99 (MQ=255)
cTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ct < 2:2311676/101‑2 (MQ=255)
tCAAAGGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctc < 2:4412463/101‑3 (MQ=255)
tCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctc < 2:299873/101‑3 (MQ=255)
tCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctc < 1:4686202/101‑3 (MQ=255)
tCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctc < 1:421696/101‑3 (MQ=255)
cAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcg < 1:4738969/101‑4 (MQ=255)
cAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcg > 1:1290361/1‑98 (MQ=255)
cAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..cccg > 1:2355992/1‑98 (MQ=255)
cAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..cccc > 1:149969/1‑98 (MQ=255)
aaaCGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcgg > 1:5410902/1‑97 (MQ=255)
aaCGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcggc < 1:1100779/101‑6 (MQ=255)
cgcggcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcggctt < 1:4796730/101‑8 (MQ=255)
cgcggcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcggctt > 2:1068896/1‑94 (MQ=255)
gcggcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGGGCTG..C.CC.c..ctcggcttc > 1:4091435/1‑93 (MQ=255)
cggcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcggcttcg > 2:3599259/1‑92 (MQ=255)
ggcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGc < 2:2404531/101‑1 (MQ=255)
cgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCt > 2:1309670/1‑101 (MQ=255)
gcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTc > 1:918038/1‑101 (MQ=255)
cggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCa < 1:1116349/101‑1 (MQ=255)
ggCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCAcccc > 1:3956038/1‑101 (MQ=255)
gCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CTCC.CT.C..GGCTTCGCCTCAccccc > 1:5701745/1‑101 (MQ=255)
gCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCAccccc < 1:2281516/101‑1 (MQ=39)
gCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCAccccc > 2:1824854/1‑101 (MQ=39)
gATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCgg < 1:4839212/101‑1 (MQ=39)
gATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCgg < 2:1984258/101‑1 (MQ=39)
aTGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCggg < 1:3013568/101‑1 (MQ=39)
ggAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCgggct > 2:562102/1‑99 (MQ=38)
ggAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGat < 1:2763845/101‑1 (MQ=38)
aGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCC.CC.C..C..GGCTTCGCCTCACCCCCGGGatat < 2:5643348/101‑1 (MQ=39)
aGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGatat < 2:4655345/101‑1 (MQ=38)
aGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..CGCTTCTCCTCACCCCCGGGatat > 1:2458423/1‑101 (MQ=255)
gggCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATAtt < 1:391959/101‑1 (MQ=38)
ggCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATAttt < 1:1595466/101‑1 (MQ=38)
aCGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCCGGATATTTggg > 2:5189266/1‑101 (MQ=37)
cGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTgggg < 2:3326856/101‑1 (MQ=38)
gAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGCTTTTTGGGGc > 1:2252322/1‑101 (MQ=38)
ggACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAg < 1:5581392/101‑1 (MQ=37)
gACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGGAAGa > 2:858712/1‑101 (MQ=37)
gACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGa > 2:1332553/1‑101 (MQ=37)
aCAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAATAt > 2:4881950/1‑101 (MQ=37)
aCAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAt < 2:213515/101‑1 (MQ=37)
aCAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAt < 2:3786592/101‑1 (MQ=37)
cAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.a < 1:4295913/101‑1 (MQ=37)
aGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.aa < 1:2020068/101‑1 (MQ=37)
aGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.aa < 2:259185/101‑1 (MQ=37)
ccTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAc > 2:2081698/1‑101 (MQ=37)
cTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAATAT.AAAcc > 1:46351/1‑101 (MQ=37)
gTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.C..CTGGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAcccc < 2:4070739/101‑1 (MQ=37)
tCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCa < 1:5380188/101‑1 (MQ=37)
gcgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCt < 2:3638281/101‑1 (MQ=37)
cgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCtt < 1:2142202/101‑1 (MQ=37)
gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCCG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCttt > 2:1954460/1‑101 (MQ=37)
aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCa < 2:4730746/101‑1 (MQ=37)
aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCa < 2:4856856/101‑1 (MQ=37)
aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCa < 1:4572323/101‑1 (MQ=37)
tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTg < 1:452773/101‑1 (MQ=37)
tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTg < 2:1732861/101‑1 (MQ=37)
tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTg < 1:629058/101‑1 (MQ=37)
cgcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGcc > 2:2743460/1‑101 (MQ=37)
gcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCg < 2:3266174/101‑1 (MQ=37)
cGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCaaa < 1:3599476/101‑1 (MQ=37)
gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat < 2:953523/101‑1 (MQ=37)
gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat > 2:1748538/1‑101 (MQ=25)
gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat < 1:1332641/101‑1 (MQ=37)
gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat > 1:2446818/1‑101 (MQ=37)
gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCCCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat > 1:2362294/1‑101 (MQ=37)
gTGGTCAGCGTTTAAGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat < 1:3020547/101‑1 (MQ=25)
ggTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAatat < 2:2224640/101‑1 (MQ=37)
ggTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAatat < 2:5296948/101‑1 (MQ=37)
ggTCAGCGTTTAGGCAAGGGGGCGATG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTTGGGCAAGAT.AAACCCCATCATTTCACTTTGCCGCAAatat > 2:4768635/1‑101 (MQ=25)
gTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGGTATTTGGGGCAAGAT.AAACCCCATCCTTTCACGTTGCCCCAAATATc > 2:3844300/1‑101 (MQ=25)
gTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATc < 1:2403289/101‑1 (MQ=37)
tCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATcc < 1:132449/101‑1 (MQ=37)
tCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATcc < 1:2550387/101‑1 (MQ=37)
tCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATcc < 2:2355858/101‑1 (MQ=37)
cAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGCTATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATccc > 1:768652/1‑101 (MQ=25)
cAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATccc > 2:5130113/1‑101 (MQ=37)
aGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCg > 2:4163553/1‑101 (MQ=25)
gCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgg > 2:114959/1‑101 (MQ=25)
gCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgg > 1:3327473/1‑101 (MQ=25)
cGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCggg < 1:3801433/101‑1 (MQ=37)
gTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggg < 1:1844861/101‑1 (MQ=37)
tttAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCggggg < 2:432245/101‑1 (MQ=37)
tttAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCggggg > 1:1891782/1‑101 (MQ=25)
ttAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggggg < 1:3481550/101‑1 (MQ=37)
ttAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggggg > 2:3491651/1‑101 (MQ=25)
aGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCTGGGGGGTg < 2:4053234/101‑1 (MQ=25)
ggaaGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGaa < 1:4380892/99‑1 (MQ=25)
gCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGaa > 2:3469463/1‑101 (MQ=37)
gCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGaa > 2:321424/1‑101 (MQ=37)
aaGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAtt < 2:1422571/101‑1 (MQ=37)
aaGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGCGAAtt > 1:1987906/1‑101 (MQ=25)
ggggCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgc > 1:3793219/1‑101 (MQ=37)
gggCTCTG..C.CCCC..C..GGCTTCG.CTC.CCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGgccaaa > 1:5101720/1‑98 (MQ=2)
gggCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgcc < 2:3084148/101‑1 (MQ=37)
|
TATGTGCTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CT.C..C..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGCC > NC_014034/1303727‑1303921
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|