| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,303,831 | +T | 95.6% | intergenic (+18/+139) | urtE → / ← RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,303,831 | 2 | .→T | 95.6% | 18.9 ‑1.8 ‑1.8 | 205 | intergenic (+18/+139) | urtE/RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Reads supporting (aligned to +/- strand): new base (80/116): ref base (6/3): total (86/119) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.70e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.49e-02 | ||||||||||
Only 100 of 250 total aligned reads displayed.
CTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CT.C..C..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGCC > NC_014034/1303733‑1303921
|
cTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ct < 1:2184299/101‑2 (MQ=255)
tCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctc < 2:3744735/101‑3 (MQ=255)
tCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctc < 1:4686202/101‑3 (MQ=255)
cAAGCGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcg < 2:142085/101‑4 (MQ=255)
aaaCGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcgg > 1:5410902/1‑97 (MQ=255)
aaaCGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcgg < 1:1845105/101‑5 (MQ=255)
aaCGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcggc < 1:1100779/101‑6 (MQ=255)
cgcggcggggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcggctt < 1:1482804/101‑8 (MQ=255)
cgcggcgcggTGGCGATTGAGGGCACGAAGGACAACCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcggctt < 1:3341158/101‑8 (MQ=255)
cgcggcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcggctt < 1:4796730/101‑8 (MQ=255)
gcggcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctcggcttc < 1:2382386/101‑9 (MQ=255)
gcggcgcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.c..ctccgcttc > 1:4655621/1‑93 (MQ=255)
gcggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTc > 1:918038/1‑101 (MQ=255)
cggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCa > 2:3020373/1‑101 (MQ=255)
cggTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCa < 1:1116349/101‑1 (MQ=255)
gTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCAcc > 1:2358058/1‑101 (MQ=255)
tGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCAccc > 2:3353612/1‑101 (MQ=255)
ggCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCAcccc > 1:3956038/1‑101 (MQ=255)
gCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..CTCC.CT.C..GGCTTCGCCTCAccccc > 1:5701745/1‑101 (MQ=255)
gCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCAccccc > 2:1824854/1‑101 (MQ=39)
cGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCCCCCCCg > 1:4172137/1‑101 (MQ=255)
cGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCg < 2:149949/101‑1 (MQ=39)
gATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCgg < 2:1984258/101‑1 (MQ=39)
gATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCgg < 1:3657799/101‑1 (MQ=39)
gATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCCG..C.CC.CCTC..GGGTTCGCCTCAccccccg > 1:2699012/1‑99 (MQ=255)
gtGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCggg < 1:715267/100‑1 (MQ=39)
tGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCC.CC.C..C..GGCTTCGCCTCACCCCCgggg > 1:4055433/1‑100 (MQ=255)
tGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGa < 2:641935/101‑1 (MQ=39)
ggAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGat < 1:4997881/101‑1 (MQ=38)
aGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCC.CC.C..C..GGCTTCGCCTCACCCCCGGGatat < 2:5643348/101‑1 (MQ=39)
aGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGatat < 2:4655345/101‑1 (MQ=38)
cACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTgg > 2:5402572/1‑101 (MQ=38)
aCGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCCGGATATTTggg > 2:5189266/1‑101 (MQ=37)
gAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTTACCCCCCGGATATTTCGGGc > 2:2703934/1‑101 (MQ=37)
aaGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCCCCCCCGGGATATTTGGGGCa > 1:1559096/1‑101 (MQ=38)
ggACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAg < 1:5581392/101‑1 (MQ=37)
gACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGa > 2:1332553/1‑101 (MQ=37)
gcAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAt < 2:3216224/100‑1 (MQ=37)
aCAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAATAt > 2:4881950/1‑101 (MQ=37)
aGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGGTATTTGGGGCAAGAT.aa > 2:4164372/1‑101 (MQ=37)
gCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.aaa < 2:2969153/101‑1 (MQ=37)
ccTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAc > 2:2081698/1‑101 (MQ=37)
tGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAccc < 2:93606/101‑1 (MQ=37)
gTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.C..CTGGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAcccc < 2:4070739/101‑1 (MQ=37)
tCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCa < 1:5380188/101‑1 (MQ=37)
tCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCa < 1:2140570/101‑1 (MQ=37)
cccGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCAt < 1:2456444/101‑1 (MQ=37)
cccGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCAt < 1:4740082/101‑1 (MQ=37)
ccGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATc > 1:198374/1‑101 (MQ=37)
gcgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCt < 2:350031/101‑1 (MQ=37)
gcgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAACCCATCCt > 1:3127839/1‑101 (MQ=25)
cgAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCtt < 1:1309758/101‑1 (MQ=37)
gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCttt < 1:3016018/101‑1 (MQ=37)
gAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCCG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCttt > 2:1954460/1‑101 (MQ=37)
aaaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTc < 2:25339/101‑1 (MQ=37)
aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCa < 1:1285660/101‑1 (MQ=37)
aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCa < 1:4572323/101‑1 (MQ=37)
aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCa < 2:4730746/101‑1 (MQ=37)
aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCa < 2:4856856/101‑1 (MQ=37)
aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAAACCCATCCTTTCa > 2:3481649/1‑101 (MQ=25)
aaCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGAAATTTGGGGCAAGAT.AAACCCCATCCTTTCa > 2:3612957/1‑101 (MQ=37)
aCCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCAc < 2:1038783/101‑1 (MQ=37)
ccTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCt < 2:3845396/101‑1 (MQ=37)
cTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTGCCC.CC.C..C..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCCTCCTTTCACCtt > 1:2421626/1‑101 (MQ=37)
cTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCtt < 2:4526880/101‑1 (MQ=37)
cTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCtt < 2:3201380/101‑1 (MQ=37)
cTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCtt > 1:425978/1‑101 (MQ=37)
tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTg > 1:3903603/1‑101 (MQ=37)
tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTg < 1:629058/101‑1 (MQ=37)
tGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTg < 2:1732861/101‑1 (MQ=37)
cgcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGcc < 1:2256370/101‑1 (MQ=37)
cgcgcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGcc < 1:1797120/101‑1 (MQ=37)
gcCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCa < 1:2316074/101‑1 (MQ=37)
gcCGTGGTCAGCGTTTAGGCAAGGGGGCCCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCa < 1:4542200/101‑1 (MQ=37)
cGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCaaa < 1:3599476/101‑1 (MQ=37)
gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat < 2:953523/101‑1 (MQ=37)
gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat > 2:1748538/1‑101 (MQ=25)
gTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAat > 2:3306966/1‑101 (MQ=25)
tGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAata < 2:1290278/101‑1 (MQ=37)
tGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCCCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAata > 1:4514337/1‑101 (MQ=37)
ggTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAatat < 2:5296948/101‑1 (MQ=37)
ggTCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAatat < 2:2224640/101‑1 (MQ=37)
ggTCAGCGTTTAGGCAAGGGGGCGATG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTTGGGCAAGAT.AAACCCCATCATTTCACTTTGCCGCAAatat > 2:4768635/1‑101 (MQ=25)
tCAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATcc < 2:2355858/101‑1 (MQ=37)
cAGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATccc > 2:5130113/1‑101 (MQ=37)
aGCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCg > 1:2936492/1‑101 (MQ=25)
gCGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgg > 2:114959/1‑101 (MQ=25)
cGTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCggg < 1:3801433/101‑1 (MQ=37)
gTTTAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggg > 2:3840322/1‑101 (MQ=37)
ctgacggacggggggCTCTGC.C.CC.C..C..GGCTTCG.CTC.CCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCaggggg > 2:2290355/11‑101 (MQ=2)
tttAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCggggg < 2:432245/101‑1 (MQ=37)
tttAGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCggggg > 1:4329824/1‑101 (MQ=25)
aGGCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCgggggggg > 1:1326144/1‑99 (MQ=25)
ggCAAGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGa < 1:2486712/101‑1 (MQ=37)
aaGGGGGCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAAtt > 2:2391048/1‑101 (MQ=25)
ggggCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgc < 2:4057785/101‑1 (MQ=37)
gggCTCTG..C.CCCC..C..GGCTTCG.CTC.CCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGgccaaa > 1:5101720/1‑98 (MQ=2)
gggCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgcc < 2:2129050/101‑1 (MQ=37)
ggCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgccg < 1:1362219/101‑1 (MQ=37)
ggCGCTG..C.CC.CCTC..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGgccg > 1:2003971/1‑101 (MQ=25)
|
CTCAAACGCGGCGCGGTGGCGATGGAGGGCACGAAGGACAGCCTGTCCCGCGAAACCCTGCGCGCCGTGGTCAGCGTTTAGGCAAGGGGGCGCTG..C.CT.C..C..GGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCCGCC > NC_014034/1303733‑1303921
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 26 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|