| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,303,918 | +GAAG | 100% | intergenic (+105/+52) | urtE → / ← RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,303,918 | 1 | .→G | 100.0% | 223.5 | 113 | intergenic (+105/+52) | urtE/RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Reads supporting (aligned to +/- strand): new base (84/27): ref base (1/1): total (85/28) | ||||||||||
| * | NC_014034 | 1,303,918 | 2 | .→A | 100.0% | 221.7 | 113 | intergenic (+105/+52) | urtE/RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Reads supporting (aligned to +/- strand): new base (83/27): ref base (1/1): total (85/28) | ||||||||||
| * | NC_014034 | 1,303,918 | 3 | .→A | 100.0% | 223.2 | 113 | intergenic (+105/+52) | urtE/RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Reads supporting (aligned to +/- strand): new base (84/27): ref base (1/1): total (85/28) | ||||||||||
| * | NC_014034 | 1,303,918 | 4 | .→G | 100.0% | 223.0 | 113 | intergenic (+105/+52) | urtE/RCAP_rcc01231 | urea ABC transporter ATP‑binding protein UrtE/UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
| Reads supporting (aligned to +/- strand): new base (84/27): ref base (1/1): total (85/28) | ||||||||||
Only 100 of 126 total aligned reads displayed.
GGGGGCGCTG.CCTC..CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....C....GCCAAGA..TGGGG..G..GC.CCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCAT > NC_014034/1303818‑1303996
||||
gggggCTCTGCCCCC..CGGCTTCG.CTC.CCCCCGGGATATTTGCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGgc....ca < 1:5698094/101‑2 (MQ=2)
gggCGCTG.CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgc....c < 2:3084148/101‑1 (MQ=37)
gggCGCTG.CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgc....c < 2:2129050/101‑1 (MQ=37)
gggCGCTG.CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGCGAATTGgc....c > 2:3287466/1‑101 (MQ=25)
ggCGCTG.CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGgc....c....g < 1:1362219/101‑1 (MQ=37)
ggCGCTG.CCCCCTCGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGGGAATTGgc....c....g > 1:2003971/1‑101 (MQ=25)
atTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGCATTGGC....CGAAGGCCAAGA..TGGGG..GCAGCGCCCCCTTTTCGgggc > 2:2298191/1‑101 (MQ=17)
tttGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGgggcg > 1:3388526/1‑101 (MQ=14)
tttGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGgggcg < 2:4373405/101‑1 (MQ=14)
ttGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGgggcgg < 1:2011351/101‑1 (MQ=14)
tGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGgggcggg > 2:2837545/1‑101 (MQ=14)
tGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGgggcggg > 1:4613557/1‑101 (MQ=14)
tGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGgggcggg > 1:2812680/1‑101 (MQ=14)
tGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGgggcggg > 2:1283896/1‑101 (MQ=14)
ggggCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGgggcgggc > 2:2622355/1‑101 (MQ=14)
ggggCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGgggcgggc > 1:1335045/1‑101 (MQ=14)
gggCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggcc > 2:3675614/1‑101 (MQ=14)
gggCAAGAT.AAACCCCACCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggcc < 2:5204432/101‑1 (MQ=9)
ggCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccg > 2:601358/1‑101 (MQ=14)
ggCAAGAT.AAACCCCATCCTTCCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccg < 2:4091188/101‑1 (MQ=9)
gCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATCTCCCGGGGGGAGAATTGGCCAGAC....GCCAACA..GGGGG..GCAGCGCTCCCTTTTCGGGGCgggccgc > 2:402687/1‑101 (MQ=255)
aaGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGCGGAAG....GCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgacg > 2:3276286/1‑98 (MQ=9)
aaGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcag > 1:894840/1‑101 (MQ=14)
aGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGAGCAGGGC..A..GCGCCCCCTTTTCGAGGCgggccgcagg > 1:4971552/1‑101 (MQ=9)
gAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcaggg > 2:546073/1‑101 (MQ=14)
gAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcaggg > 2:3216256/1‑101 (MQ=14)
gAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcaggg > 1:2632498/1‑101 (MQ=14)
aT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggc > 1:591947/1‑101 (MQ=14)
aT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggc > 2:2991486/1‑101 (MQ=14)
aT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggc > 2:4995371/1‑101 (MQ=14)
aT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggc > 2:4547250/1‑101 (MQ=14)
t.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggcc > 2:857462/1‑101 (MQ=14)
t.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggcc > 2:1856615/1‑101 (MQ=14)
t.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggcc > 1:1874048/1‑101 (MQ=14)
t.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggcc < 1:2937549/101‑1 (MQ=14)
t.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggcc > 1:4363255/1‑101 (MQ=14)
aaaCCCCATCCTTTCCCCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggccg < 1:2240406/101‑1 (MQ=9)
aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggccg > 1:4393273/1‑101 (MQ=14)
aaaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggccg > 1:2943450/1‑101 (MQ=14)
caCCCCTTTCTTCGACCTTGCCGCAAATATCCGGGGGGGTGAATTGGC....CGAAGGCGAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggccgc < 2:5052714/100‑1 (MQ=0)
aaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGGTCA..GCGCCCCCTTTTCGGGGCgggccgcagggccgc > 1:933061/1‑101 (MQ=9)
aaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggccgc > 2:1853090/1‑101 (MQ=14)
aaCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggccgc > 1:2496238/1‑101 (MQ=14)
aCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCgggccgcagggccgca > 2:5774606/1‑101 (MQ=14)
aCCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCATTTTCGGGGCgggccgcagggccgcc > 1:479093/1‑100 (MQ=9)
ccccATCCTTTCACCTTGCCGCAAATATTCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAc > 2:4343986/1‑101 (MQ=9)
ccccATCCTTTCACCTTGCCGCAAATATCCGGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAc < 1:373148/101‑1 (MQ=9)
ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAccc > 2:3872043/1‑101 (MQ=14)
ccATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCAccc > 1:5705110/1‑101 (MQ=14)
cATCCTTTCCCCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCt < 1:4164622/101‑1 (MQ=9)
cATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCt > 2:251372/1‑101 (MQ=14)
cATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCt > 1:3443131/1‑101 (MQ=14)
aTCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTg > 2:5559982/1‑101 (MQ=14)
aTCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTg > 1:814319/1‑101 (MQ=14)
aTCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTg > 1:5710949/1‑101 (MQ=14)
tCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGt > 1:5032056/1‑101 (MQ=14)
ccTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGGAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCTCCCTGTc > 2:2947519/1‑101 (MQ=9)
cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCa > 2:4818830/1‑101 (MQ=14)
cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCa > 2:1463899/1‑101 (MQ=14)
cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCa < 1:3659865/101‑1 (MQ=14)
cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCa > 1:714632/1‑101 (MQ=14)
cTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCa < 2:5529269/101‑1 (MQ=14)
cTTTCACCTTGCCGCAAATACCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCa < 1:527064/101‑1 (MQ=9)
tttCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAg < 1:5227698/101‑1 (MQ=14)
tttCACCTTGCCGCAAATATCCCGGGGGGCGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCGGGGCCGCACCCTGTCAg > 1:5397740/1‑101 (MQ=9)
ttCCCCTTGCCGCAAATAGCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGGGCG..GCGCCGCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAgc < 2:2416776/101‑1 (MQ=12)
taaCCTTGCCGCAAATATCCCGGGGGGCGAATTGGC....CGAAGGACAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAACGACGGACCCTGTCAgcg > 2:5626130/3‑101 (MQ=2)
tCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAgcg < 1:5402862/101‑1 (MQ=14)
cACCTTGCCGCAAATATCCCGGGGGGGGAATTGGC....CGAAGGCCAAGA..GGGGG..GAAGCGCCCCCTTTTCGGGGAGGGCCGAAGGGCCGCCCCCTGTCCgcgc > 1:2625831/1‑101 (MQ=2)
cTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATc > 1:3709952/1‑101 (MQ=17)
cTTGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATc > 1:1762611/1‑101 (MQ=17)
tGCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATccc > 1:4646614/1‑101 (MQ=17)
gCCGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATcccc > 1:193750/1‑101 (MQ=17)
ccGCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCa > 2:4628181/1‑101 (MQ=17)
cGCAAATATCCCGGGGGGTGAATTGGCGGAAG....GCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa < 1:232329/101‑1 (MQ=12)
cGCAAATACCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCaa < 2:1020438/101‑1 (MQ=12)
gCAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCCGCGCATCCCCAAg > 1:5671696/1‑101 (MQ=12)
cAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc > 1:4907312/1‑101 (MQ=17)
cAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc > 1:508984/1‑101 (MQ=17)
cAAATATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgc > 1:964782/1‑101 (MQ=17)
aaaTATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcc > 2:2034352/1‑101 (MQ=17)
aagatCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCATCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgccc < 1:1011041/98‑1 (MQ=12)
aagatCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgccc > 1:3299641/4‑101 (MQ=12)
aaTATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgccc > 1:4321106/1‑101 (MQ=17)
aaTATCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgccc < 1:2299909/101‑1 (MQ=17)
atatCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccg > 2:4749134/1‑101 (MQ=17)
atatCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccg > 1:1805072/1‑101 (MQ=17)
agaccccGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccg < 2:4540009/97‑1 (MQ=12)
tatCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgc > 2:2878174/1‑101 (MQ=18)
atCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc < 1:1260801/101‑1 (MQ=18)
atCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgcc < 2:4610426/101‑1 (MQ=18)
tCCCGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAgcccgccc < 1:4275418/101‑1 (MQ=18)
cccGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGcccgcccg > 2:4785257/1‑101 (MQ=18)
cccGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGcccgcccg > 1:276539/1‑101 (MQ=18)
cccGGGGGGTGAATGGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGcccgcccg < 2:5110548/101‑1 (MQ=16)
ccGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCccgcccgc < 2:4329558/101‑1 (MQ=18)
ccGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCccgcccgc > 1:683501/1‑101 (MQ=18)
cGGGGGGTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCCAGGCCGCCCGCa > 2:5556519/1‑101 (MQ=12)
ggggggTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCAt > 1:4629290/1‑101 (MQ=18)
ggggggTGAATTGGC....CGAAGGCCAAGA..GGGGG..GCAGCGCCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACACTGTCAGCGCATCCCCAAGCCCGCCCGCAt > 2:1707854/1‑101 (MQ=12)
||||
GGGGGCGCTG.CCTC..CGGCTTCGCCTCACCCCCGGGATATTTGGGGCAAGAT.AAACCCCATCCTTTCACCTTGCCGCAAATATCCCGGGGGGTGAATTGGC....C....GCCAAGA..TGGGG..G..GC.CCCCCTTTTCGGGGCGGGCCGCAGGGCCGCACCCTGTCAGCGCATCCCCAAGCCCGCCCGCAT > NC_014034/1303818‑1303996
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|