| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,249,367 | +T | 2.2% | intergenic (‑163/‑142) | parE ← / → RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,249,367 | 1 | .→T | 2.2% | 11.7 ‑1.0 ‑0.6 | 232 | intergenic (‑163/‑142) | parE/RCAP_rcc02080 | DNA topoisomerase IV subunit B/HAD superfamily hydrolase |
| Reads supporting (aligned to +/- strand): new base (4/1): ref base (123/104): total (127/105) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.81e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.30e-01 | ||||||||||
Only 100 of 272 total aligned reads displayed.
GAAGGGGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATA > NC_014034/2249268‑2249466
|
gaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGaa < 1:2761766/101‑1 (MQ=255)
aatggggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.t > 2:4143474/4‑101 (MQ=255)
aagGGGGCTCTGCCCCCGTCCCGTGCCCGCACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.t < 1:2256815/101‑1 (MQ=37)
agGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.Tg > 2:2174038/1‑101 (MQ=255)
ggggCTCTGCCCCCGTCCCTTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:2369266/101‑1 (MQ=255)
ggggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:4943000/101‑1 (MQ=255)
ggggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc < 2:5601140/101‑1 (MQ=255)
ggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcgc < 2:1902201/101‑1 (MQ=255)
gctctccccccGTCCCGTGCCGGGACC.CCCCCGGGATTTTTGAGGAAAGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCa < 1:169553/94‑1 (MQ=37)
gctccgcccccGTCCCGTGCCGGGACT.CCCCTGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCa < 2:2693487/94‑1 (MQ=255)
gCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCa > 1:4309378/1‑101 (MQ=255)
ctctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g < 2:3985903/101‑1 (MQ=255)
tgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCa < 2:5077108/98‑1 (MQ=255)
tgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCa > 2:2893922/4‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCGAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcccg > 2:3091455/3‑99 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 1:3687868/3‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag > 2:4361792/3‑101 (MQ=255)
gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag < 2:2252455/99‑1 (MQ=255)
cccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgg < 2:4689248/101‑1 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 2:251324/1‑101 (MQ=255)
cgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggg > 2:475349/1‑101 (MQ=255)
tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg > 2:1499338/1‑101 (MQ=255)
cccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.c < 1:3253733/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.Ca < 1:4941439/101‑1 (MQ=255)
ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.Ca > 2:2728021/1‑101 (MQ=255)
cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg < 2:4629769/101‑1 (MQ=255)
gtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.c > 1:3575561/1‑101 (MQ=255)
gcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggg < 1:668318/95‑1 (MQ=18)
tGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.cg > 2:5475188/1‑101 (MQ=255)
gCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg.cg.c > 2:108129/1‑101 (MQ=255)
ccGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cc < 2:171451/101‑1 (MQ=255)
gggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccc > 1:3995097/1‑101 (MQ=255)
ggccT.CCCCCGGGATATTGGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccc.c < 1:1024759/98‑1 (MQ=255)
ggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGGGAA.TGGCGAA..GCCAGAGGGGGG.CTg.cg.c > 2:4956631/1‑101 (MQ=17)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccc.c > 2:3739006/1‑101 (MQ=255)
ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccc.c > 2:4051320/1‑101 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccc.ccttc > 2:580828/1‑97 (MQ=255)
t.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccc.ccttc > 2:3809318/1‑97 (MQ=255)
ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTcgc > 2:3213230/1‑101 (MQ=255)
cccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCCC.Ctgc > 1:1041015/1‑99 (MQ=2)
cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCgcggg < 1:3766694/101‑1 (MQ=255)
cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCgcggg < 1:5463697/101‑1 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CGC.GG.CCCC.CCTCgggggcg > 1:2812371/1‑101 (MQ=37)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCgcgggc > 1:4592779/1‑101 (MQ=255)
gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCgcgggc < 2:4246316/101‑1 (MQ=255)
ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCgcgggcg > 1:1103886/1‑101 (MQ=255)
gATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCCC.Ctgccccgc > 2:4463974/1‑94 (MQ=2)
atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGggcggc > 2:5111094/1‑101 (MQ=255)
ttttggAGGAAAGAAAAG...GGGG..GGTTTTAATCTTGCCAAAAATATCCGGGGGGGTGAA.TGGCGCA..GCAAGGGGGGGG.CAGCCC.CCCC.CTTCGCGGGCGGcc < 2:1175788/96‑1 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGcc < 1:5614770/101‑1 (MQ=255)
tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAAGATCCGGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGcc < 1:1374223/101‑1 (MQ=37)
tgtGAGGCAAGATGGA...GGCG..GGCTTTAATCTTGCCGAAAATATCGCGGTGGGGGAA.GGGCGCA..GCTAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCcgc < 2:3864858/99‑1 (MQ=21)
ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGccaga > 2:5220671/1‑98 (MQ=255)
tGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGa > 1:1217705/1‑101 (MQ=255)
gAGGCAAGATGAA...GGGG..TGCGTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGAc < 2:4309113/101‑1 (MQ=25)
gCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGAcgcg < 2:2212496/101‑1 (MQ=255)
gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGcgcc > 1:5389961/1‑101 (MQ=255)
gga...GGGG..GGTTTTTCTTTTTGCGAAAATTGCCCGGGGGGGGAAGGGGCCCC..GCCGGGGGGGGGCCCC.CC.CCCC.CTTCGCGGGCGGCCGCGACGCGcgccgc < 1:1965046/99‑1 (MQ=255)
gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGA.GGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 2:5670334/1‑101 (MQ=255)
aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCaa > 1:1283618/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAAc > 1:3393478/1‑101 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:2572678/101‑1 (MQ=255)
a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAAc < 1:1605040/101‑1 (MQ=255)
gatggtg..ggCTTTCAACTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCa < 2:744295/95‑1 (MQ=25)
ggg..ggTTTTCATCTTGCCGAAAAAACCCGGGGGGGTGAA.TGGCGCA..GCCAGGGGGGGC.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg < 1:4228043/101‑1 (MQ=37)
ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg > 2:1409554/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:2357232/1‑101 (MQ=255)
tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg > 1:5154420/1‑101 (MQ=255)
tCATCTTGCCGAAAATATCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc < 1:4357591/101‑1 (MQ=255)
tCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGcc > 1:1873326/1‑101 (MQ=255)
cATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGCCGTGccc > 1:566588/1‑101 (MQ=255)
tCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCt > 2:563883/1‑101 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt < 2:3581247/101‑1 (MQ=255)
ttGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCttt > 1:5744331/1‑101 (MQ=255)
tGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGAGGCGCGCCGCAACAGGTCGTGCCCCgttc > 1:1270002/1‑100 (MQ=37)
gCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGt < 1:3007240/101‑1 (MQ=255)
gCCGAAAATATCCCAGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGt > 2:1020012/1‑101 (MQ=255)
ccGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTc < 2:1861347/101‑1 (MQ=255)
gAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCAt > 2:422137/1‑101 (MQ=255)
aaaTATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTc > 1:4728132/1‑101 (MQ=255)
atatCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTg < 1:4113666/101‑1 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTg < 2:5282009/101‑1 (MQ=255)
atatCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGACGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTg > 2:341770/1‑101 (MQ=255)
atCCGGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc < 1:885779/101‑1 (MQ=255)
atCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGTGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTc > 1:5551720/1‑101 (MQ=255)
tCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCg < 1:2677914/101‑1 (MQ=255)
cccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGc < 1:4825855/101‑1 (MQ=255)
ccGGGGGGTGAA.TGGCGCA..GCCAGGGGAGGT.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa < 2:3687640/101‑1 (MQ=255)
ccGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCa < 2:2575031/101‑1 (MQ=255)
cGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc > 2:2127671/1‑101 (MQ=255)
cGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGG.CAGCCC.CCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAc < 1:1499431/101‑1 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc > 2:2052066/1‑101 (MQ=255)
gggggTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGCTGCAccc > 2:4867085/1‑101 (MQ=38)
gggggGGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCCACTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCAccc < 2:2298741/101‑1 (MQ=255)
gggTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCAt < 2:4478240/101‑1 (MQ=255)
ggTGAA.TGGCGCA..GCCGGGGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATg < 2:1104861/101‑1 (MQ=255)
ggAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTc < 1:2174160/100‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCAt < 1:3110336/101‑1 (MQ=255)
aa.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCACTCTGTCGCACCCATGTCAt < 1:3553284/101‑1 (MQ=255)
a.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATa < 1:3511109/101‑1 (MQ=255)
|
GAAGGGGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCC.CTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTGCCCCTTTGTCATTCTGTCGCACCCATGTCATA > NC_014034/2249268‑2249466
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 32 ≤
ATCG
< 40 ≤
ATCG
|