BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,485,262	+C	1.9%	coding (56/174 nt)	RCAP_rcc02310 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,485,262	1	.→C	1.9%	5.2 ‑1.2 ‑1.1	207	coding (56/174 nt)	RCAP_rcc02310	hypothetical protein
Reads supporting (aligned to +/- strand): new base (4/0): ref base (129/74): total (133/74)
Fisher's exact test strand distribution p-value = 2.99e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 8.33e-02

Only 100 of 240 total aligned reads displayed.


ATGCGGCATTTCACCTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCTGGGCGCAGGCCTCTGTCACGCTTGCGAAGGCGGTCTT  >  NC_014034/2485162‑2485361


    ggCATTTCACCTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCa                                                                                                        <  2:4357343/101‑1 (MQ=255)


    ggCATTCCCCCTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCa                                                                                                        <  2:2364508/101‑1 (MQ=255)


     gctttcccccTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCaa                                                                                                       <  2:4112308/93‑1 (MQ=255)


      ctttcccccTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCaaa                                                                                                      <  1:5411558/94‑1 (MQ=255)


      cATTTCACCTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCaaa                                                                                                      >  1:2964703/1‑101 (MQ=255)


      cATTTCACCTGCCGGTTCGAAAAGCTCGGAGCGGGTTGATTGGCCGAGGCCA.T.CGCG.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCaaa                                                                                                      <  1:646809/101‑1 (MQ=255)


        tttCACCTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAgg                                                                                                    >  1:4440096/1‑101 (MQ=255)


         ttCCCCTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGc                                                                                                   <  2:4628084/101‑1 (MQ=255)


         tcccccTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGc                                                                                                   <  2:5274970/97‑1 (MQ=255)


            cccTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCt                                                                                                <  1:1985185/100‑1 (MQ=255)


             ccTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTc                                                                                               >  1:3915642/1‑101 (MQ=255)


             ccTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTc                                                                                               >  1:4908213/1‑101 (MQ=255)


             ccTGCCGGTTCGAAAACCCCTGAGCCGGTTGGTTGGCCGAGGCCA.T.CGCC.GGGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTc                                                                                               <  1:4130908/101‑1 (MQ=25)


              cTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCg                                                                                              <  1:1894750/101‑1 (MQ=255)


              cTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCg                                                                                              >  1:2619128/1‑101 (MQ=255)


               tGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCgg                                                                                             >  1:2722672/1‑101 (MQ=255)


               tGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCgg                                                                                             <  2:3620553/101‑1 (MQ=255)


                gCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGc                                                                                            >  1:1149454/1‑101 (MQ=255)


                gCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGc                                                                                            >  2:5501980/1‑101 (MQ=255)


                 ccGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGcc                                                                                           >  1:2666195/1‑101 (MQ=255)


                      tCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.Tgcgc                                                                                     >  2:5638043/1‑101 (MQ=255)


                       cGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGcgcc                                                                                    <  2:796941/101‑1 (MQ=255)


                        gAAAATCTCTGGGCCGGTTGATTGGCCGGGCCCA.G.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGcgccc                                                                                   <  1:1228109/101‑1 (MQ=21)


                        gAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGcgccc                                                                                   <  2:1717370/101‑1 (MQ=255)


                        gAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGcgccc                                                                                   >  1:1165151/1‑101 (MQ=255)


                        gAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGcgccc                                                                                   >  2:2106078/1‑101 (MQ=255)


                         aaaaGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGcgcccg                                                                                  <  2:3096609/101‑1 (MQ=255)


                         aaaaGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGcgcccc                                                                                  >  2:1713698/1‑100 (MQ=255)


                         aaaaGCTCTGAGACGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGcgcccg                                                                                  >  1:3133056/1‑101 (MQ=255)


                          aaaGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGcgcccgc                                                                                 >  1:2398467/1‑101 (MQ=255)


                          aaaGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGcgcccgc                                                                                 >  1:180124/1‑101 (MQ=255)


                             gCTCTGAGCCGGTTGATTGGCCGGGGCCA.C.CGCC.GAGGCCACCCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGcccgcccc                                                                              <  1:4696247/101‑1 (MQ=255)


                             gCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCCCGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGcccgcccc                                                                              <  1:436546/101‑1 (MQ=255)


                             gCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGcccgcccc                                                                              >  2:5720675/1‑101 (MQ=255)


                              ctctGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGcccgccccg                                                                             >  2:557757/1‑101 (MQ=255)


                              ctctGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGcccgccccg                                                                             >  2:3714119/1‑101 (MQ=255)


                               tctGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGcccgccccgc                                                                            >  1:4261498/1‑101 (MQ=255)


                                ctGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCccgccccgc.c                                                                          >  1:81658/1‑101 (MQ=255)


                                cggAGCCGTTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCCCGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCccgccccgc.c                                                                          <  2:3548537/99‑1 (MQ=255)


                                cggAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCccgccccgc.c                                                                          <  2:2586541/99‑1 (MQ=255)


                                 tGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCcgccccgc.cc                                                                         >  1:276648/1‑101 (MQ=255)


                                   aGCCGGTTGATCGGCCGAAGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.t                                                                     >  1:5298620/1‑101 (MQ=255)


                                    tcccgTTGTTTGGCCGGGGCCC.TCCGCC.GGGGCCACGCGACACATTGGCCCCGGGCCCGCCGAGGG.CCCAGAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.t                                                                     <  1:3048800/97‑1 (MQ=14)


                                    gcgggTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.Tg                                                                    <  2:4688668/98‑1 (MQ=255)


                                    gCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGGCCCGC.CC.A.Tg                                                                    >  2:677821/1‑101 (MQ=255)


                                     ccGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.Tgg                                                                   >  2:1410895/1‑101 (MQ=255)


                                      cGGGTGAGTGGCCGGGGCCACC.CCCC.GGGCCCACGCGCGACATCAGCCCCATGCCCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.Tgg                                                                   <  1:2115522/101‑1 (MQ=17)


                                         ttGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.Tggcggg                                                               >  1:5490319/1‑101 (MQ=255)


                                         ttGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.Tggcggc                                                               >  2:1595788/1‑100 (MQ=255)


                                          tGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCTCCCGCCCCGC.CC.A.Tggcgggc                                                              <  2:2964536/101‑1 (MQ=255)


                                          tGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.Tggcgggc                                                              <  2:2680414/101‑1 (MQ=255)


                                           gATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGC.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.Tggcggggc                                                             >  1:491599/1‑99 (MQ=255)


                                           gATTGGCCGAGGCCA.G.CCCC.GGGCCCCCGCGCGACATCAGCCCCATGCCCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.Tggcgggcg                                                             <  1:2085765/101‑1 (MQ=17)


                                           gATGGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGCCCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.Tggcgggcg                                                             <  1:4565673/101‑1 (MQ=255)


                                           gATGGGCCGAGGCCA...CGCCGGAGGCCACGCGCGACATCACCCCCATGCCCGCCGAGGC.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.Tggcgggcg                                                             <  2:889209/101‑1 (MQ=17)


                                            aTTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGggg.c                                                           >  1:2056220/1‑101 (MQ=255)


                                            aTTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGggg.c                                                           >  2:930412/1‑101 (MQ=255)


                                            aTTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.CGCCCCCCCCCCGC.CC.C.TCGCGGggg.c                                                           >  1:4003649/1‑101 (MQ=17)


                                             ttGGCCCCGGCGT.T.CGGC.GGGGCCCTGCGGGGCATCAGCCCCGTGCCCGCCGGGGG.CCCAAAGGCCGTCGGCC.AGCCGCCGCCCCGC.CC.A.TGGCGGgcg.ct                                                          <  2:4836697/101‑2 (MQ=14)


                                              tGGCCGAGCCCA.C.CGCC.GAGCCCACGCGCGACACCAGCCCCATGCCCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAt                                                         <  2:4867724/101‑1 (MQ=17)


                                                gCCGAGGCCA.C.CGCC.GGGCCCCCGCGCGACATCAGCCCCATGCCCGCCGAGGG.CCCAAGGCCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.c                                                     <  2:4422299/101‑1 (MQ=17)


                                                  cggggCCA.C.CGCC.GAGCCCACGCGCGCCATCAGCCCCATGCCCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.cgc                                                   <  1:5546516/98‑1 (MQ=17)


                                                  cGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.Caaccgc                                                     >  1:1075498/1‑96 (MQ=255)


                                                  cGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.cgc                                                   >  2:2754206/1‑101 (MQ=255)


                                                   gAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGGG.CAT.T.cgcg                                                  >  1:2848463/1‑101 (MQ=255)


                                                        cA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGGGCCAT.T.CGcccccc                                              >  1:3976774/1‑99 (MQ=17)


                                                         a.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.GCT.T.CGCGccgccg                                            >  2:1936119/1‑101 (MQ=255)


                                                           accGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGccgccg                                            <  2:3893216/99‑1 (MQ=255)


                                                             cGCC.GAGGCCTCGCGCGACATCAGCCCCATGACCGCCGTGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGAGGGCG.CAT.T.CGCGCCGCCggg                                          >  2:3326950/1‑101 (MQ=255)


                                                              gCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGGG.GAG.T.CGGgccgcccgca                                         >  1:3621720/1‑97 (MQ=17)


                                                               cc.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGGG.GAC.T.CGCGCCCCCCGGGc                                        >  2:3944268/1‑101 (MQ=17)


                                                               cc.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.TCCGCCCCCCCgggg                                         >  2:3961070/1‑101 (MQ=17)


                                                                cgacggCCCCGCGCGGCACCAGCCCCCTGCCCCCCGAGGG.CCCAAAGGCCCTCGCCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGc                                        <  2:279276/97‑1 (MQ=14)


                                                                c.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGGG.CCT.T.CGCGCCCCCGGGGcg                                       >  1:3506243/1‑100 (MQ=255)


                                                                 cgggcccccgcgcgACATCAGCCCCATGCCCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCt                                       <  1:1711352/93‑1 (MQ=255)


                                                                  gAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCcgggggg                                      >  1:1334314/1‑98 (MQ=255)


                                                                   agccacctcgcgCCACCACCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCTgg                                     <  2:1106471/93‑1 (MQ=14)


                                                                     gccccccgcgACCTCAGCCCCATGCCCGCCGGGGG.CCCAAGGGCCCGCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCTGGgc                                   <  1:4605467/95‑1 (MQ=17)


                                                                     gCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.GGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCTGGgc                                   <  1:736680/101‑1 (MQ=255)


                                                                     cccccgcgcgCCATCCGCCCCAGTCCCGCCGGGGC.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCTGGgc                                   <  1:1595882/97‑1 (MQ=14)


                                                                      ccACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGGG.CAG.T.TGCGCCGCCGCGGCTGGgcg                                  >  2:1791270/1‑101 (MQ=18)


                                                                       cccgcgcgACATCAGCCCCATGCCCGCCGGGGC.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCTGGgcgc                                 <  1:60996/99‑1 (MQ=255)


                                                                       cACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAC.T.CGCGCCCCCGGGGGCGGgcgg                                 >  2:4748374/1‑100 (MQ=17)


                                                                            gcgACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCGGGGCGCCgggc                            >  1:3269925/1‑99 (MQ=255)


                                                                             cgACATTTGCCCCAAGACCGCCGAGGGCCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCGCC.ACTGGCGGGGG.CCTCT.CGCCCCCCCggggtgcggggtgg                               >  2:1065332/1‑91 (MQ=18)


                                                                             cgACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TTCCCCCCCCCCGC.CCAA.GGGGGGGCG.CAT.T.GCCCCCCCCGGGGCGGGGGGCCGGcc                            >  1:4855729/1‑101 (MQ=9)


                                                                                 aTCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCCCCGGGGGTGGGGGCCGGCCCCTGt                       >  1:5639548/1‑101 (MQ=17)


                                                                                 aTCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CCCGCCGCCGGGGCGGGGCGCCggggcccgg                       >  2:3474266/1‑94 (MQ=14)


                                                                                      ccccAAGACCGCCGAGGGCCCCAAAGGCCCTCGGCC.AGCGCCCGCCCCGCGCC.ACTGGCGGGGG.CCTCT.CGC.CCCCCGGGGGGGGGCGCCgggccccgtcc                     >  2:4100284/1‑92 (MQ=18)


                                                                                       cccATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCCCCGGGGCTGGGGGCAGGCCCCTGTCACGCt                 >  1:3528043/1‑101 (MQ=255)


                                                                                         cATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCTGGGGGCAGGCCTCTGTCACGCTTg               >  1:3349996/1‑101 (MQ=255)


                                                                                           aggccccgggggg.CCCAAAGGCCCCCCGCCGCCCCCCCCCCCCCC.CC.G.GGGGGGGCG.CCT.C.CGCGCGCCCGGGGGGGGGCGCAGGCCTCTGTCACGCTTGc              <  1:2529268/91‑1 (MQ=2)


                                                                                                gccgAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCCCCGGGGCTGGGGGCAGGCCTCCGTCACGCTTGGGACGGc        >  1:986441/1‑101 (MQ=14)


                                                                                                  cgAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CCT.T.CGCGCCGCCCGGGCTGGGGGGAGGCCTCTGTCCCCCTTGCGCAgggcg      >  2:1118590/1‑98 (MQ=14)


                                                                                                   gAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGGG.CCT.T.CGCGCCCCCGGGGCCGGGGGCCGGCCGCTGTCACGCTTGCGAAGGCGGt     >  1:3845715/1‑101 (MQ=17)


                                                                                                    aGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGGG.CAT.T.CGCGCCGCCGGGGCTGGGCGCAGGCCTCTGTCACGCTTGCGAAGGCgggc    >  1:524234/1‑99 (MQ=255)


                                                                                                     ggg.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CCT.T.CGCGCCCCCGGGGCTGGGGGCAGGCCTCTGTCACGCTTGCGAAGGGGGGCt   >  1:545456/1‑101 (MQ=17)


                                                                                                      gg.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGGG.CCT.T.CGCGCCCCCCGGGCTGGGGGCCGGCCCCTGTCACGCTTGCGAAGGCGGGCtt  >  1:5061851/1‑101 (MQ=17)


                                                                                                      gg.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCTGGGGGGAGGGCCCTGTCACCCCTGCGGAGGCGGGCtt  >  2:2464089/1‑101 (MQ=14)


                                                                                                      gg.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCTGGGCGCAGGGCCCTGTCACGCCTGCGAAGGCGGGCtt  >  2:5092608/1‑101 (MQ=17)


ATGCGGCATTTCACCTGCCGGTTCGAAAAGCTCTGAGCCGGTTGATTGGCCGAGGCCA.T.CGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGGCCCTCGGCC.TGCGCCCGCCCCGC.CC.A.TGGCGGGCG.CAT.T.CGCGCCGCCGGGGCTGGGCGCAGGCCTCTGTCACGCTTGCGAAGGCGGTCTT  >  NC_014034/2485162‑2485361

Base quality scores:


ATCG

< 3 ≤


ATCG

< 16 ≤


ATCG

< 25 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG