BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	2,485,293	+G	2.7%	coding (87/174 nt)	RCAP_rcc02310 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	2,485,293	1	.→G	2.7%	4.9 ‑1.1 ‑0.0	146	coding (87/174 nt)	RCAP_rcc02310	hypothetical protein
Reads supporting (aligned to +/- strand): new base (4/0): ref base (99/43): total (103/43)
Fisher's exact test strand distribution p-value = 3.20e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.94e-01

Only 100 of 189 total aligned reads displayed.


TCTGAGCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCTTGTGCCCACCCGCGCGCTGACGGGCGGGAA  >  NC_014034/2485193‑2485390


tctGAGCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGcccgccccgc                                                                                                             >  1:29545/1‑101 (MQ=255)


tctGAGCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGcccgccccgc                                                                                                             >  1:4261498/1‑101 (MQ=255)


 ctGAGCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCccgccccgc.c                                                                                                           >  2:726742/1‑101 (MQ=255)


 ctGAGCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCccgccccgc.c                                                                                                           >  1:81658/1‑101 (MQ=255)


 cggAGCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCccgccccgc.c                                                                                                           <  2:2586541/99‑1 (MQ=255)


  tGAGCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCcgccccgc.cc                                                                                                          >  1:276648/1‑101 (MQ=255)


  tGAGCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCcgccccgc.cc                                                                                                          <  2:3524122/101‑1 (MQ=255)


   gAGCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.a                                                                                                        >  2:1218282/1‑101 (MQ=255)


    ggCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.t                                                                                                      <  2:1719069/100‑1 (MQ=255)


    aGCCGGTTGATCGGCCGAAGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.t                                                                                                      >  1:5298620/1‑101 (MQ=255)


     gCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGGCCCGC.CC.A.Tg                                                                                                     >  2:677821/1‑101 (MQ=255)


      ccGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tgg                                                                                                    >  2:1410895/1‑101 (MQ=255)


       cGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.C.Tggc                                                                                                   >  1:4202356/1‑101 (MQ=255)


         gtttgatGGCCGGGGCCCCCCCCGGAGCCCACGCGCGACATCAGCCCCATGCCCGCCGAGGG.CCAAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tcgcg                                                                                                  <  2:4907932/95‑1 (MQ=14)


         gTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tggcgg                                                                                                 >  1:3907243/1‑101 (MQ=255)


          ttGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tggcggg                                                                                                >  2:1105598/1‑101 (MQ=255)


          ttGATTGGCCGAGGCCACCCCC.GAGCCCGCGCGCGACATCAGCCCCATGACCGCCGGGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tggcggg                                                                                                <  2:4649381/101‑1 (MQ=17)


           tGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tggcgggg                                                                                               >  2:401827/1‑100 (MQ=255)


            gATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tggcggggg                                                                                              >  1:273998/1‑99 (MQ=255)


            gATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tggcggggg                                                                                              >  1:155050/1‑99 (MQ=255)


            gATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tggcgggc.g                                                                                             >  2:4268837/1‑101 (MQ=255)


            gATTGGCCGAGGCCAGCCCC.GGGCCCCCGCGCGACATCAGCCCCATGCCCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tggcgggc.g                                                                                             <  1:2085765/101‑1 (MQ=17)


            gATGGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGCCCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.Tggcgggc.g                                                                                             <  1:4565673/101‑1 (MQ=255)


             aTTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGgg.g.c                                                                                           >  2:930412/1‑101 (MQ=255)


              ttGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.Ca                                                                                          >  2:137257/1‑101 (MQ=255)


               gggcgaaGGCCCTCGCC.GGGCCCACGCGCGACATCAGCCCCATCGCCGCGGGGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAt                                                                                         <  1:298535/95‑1 (MQ=14)


                ggCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAt.t                                                                                       <  2:2414079/101‑1 (MQ=255)


                 gCCGAGGCCACCGCC.GGGCCCCCGCGCGACATCAGCCCCATGCCCGCCGAGGG.CCCAAGGC.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.Tc                                                                                      <  2:4422299/101‑1 (MQ=17)


                   cggggCCACCGCC.GAGCCCACGCGCGCCATCAGCCCCATGCCCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.Tcgc                                                                                    <  1:5546516/98‑1 (MQ=17)


                   cGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.G.CGT.Tcgc                                                                                    >  2:3738127/1‑101 (MQ=255)


                   cGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.Caaccgc                                                                                     >  1:1075498/1‑96 (MQ=255)


                    gAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CCt.tttcg                                                                                   >  1:2582434/1‑97 (MQ=255)


                    gAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCCGGG.G.CCT.Tcgcc                                                                                   >  1:8864/1‑100 (MQ=255)


                      ggCCGTCGCC.GCGCCCCCGCGCGACTCCATCCCCATGACCGCGGAGGG.CCCAAAGG.CCCGCGG.CCTGCCCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGc.g.cc                                                                               <  2:276615/101‑1 (MQ=14)


                         cATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.GCCAT.TCGc.c.cccc                                                                             >  1:3976774/1‑99 (MQ=17)


                         atctccc.GAGGCCCCGCGCGACATCAGCCCCATGCCCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.g.ccgcc                                                                            <  2:3621492/96‑1 (MQ=255)


                          accGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.ccgccg                                                                           <  2:3893216/99‑1 (MQ=255)


                          aTCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CCT.TCGC.G.ccgccg                                                                           >  2:3196460/1‑101 (MQ=255)


                              cc.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.G.GAC.TCGC.G.CCCCCCGGGc                                                                       >  2:3944268/1‑101 (MQ=17)


                               c.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.G.CCT.TCGC.G.CCCCCGGGGcg                                                                      >  1:3506243/1‑100 (MQ=255)


                                 gAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCcgggggg                                                                     >  1:1334314/1‑98 (MQ=255)


                                  aGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.G.CAC.TCGC.G.CCGCCCGGGGTgg                                                                    >  2:2007768/1‑101 (MQ=18)


                                   gcccACGCGCGACATCACCCCCAGGCCCGCCGAGGG.CCCAAAGC.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTggg                                                                   <  2:4847910/99‑1 (MQ=17)


                                    gCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCGGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGgc                                                                  <  1:736680/101‑1 (MQ=255)


                                    cccccgcgcgCCATCCGCCCCAGTCCCGCCGGGGC.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGgc                                                                  <  1:1595882/97‑1 (MQ=14)


                                     ccACGCGCGCCATCGGCCCCATGCCCGCCGAGGG.CCCAAAGG.CCCTCGG.CCGGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGgcg                                                                 <  2:5528067/101‑1 (MQ=17)


                                     ccACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.G.CAG.TTGC.G.CCGCCGCGGCTGGgcg                                                                 >  2:1791270/1‑101 (MQ=18)


                                      cccgcgcgACATCAGCCCCATGCCCGCCGGGGC.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGgcgc                                                                <  1:60996/99‑1 (MQ=255)


                                      cACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TGGC.G.TCGCCGGGGCTTGgggc                                                                >  1:3713252/1‑101 (MQ=17)


                                      cACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAC.TCGC.G.CCCCCGGGGGCGGgcgg                                                                >  2:4748374/1‑100 (MQ=17)


                                       ccgcccgACACCAGCCCCAGGCCCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCa                                                               <  1:114797/100‑1 (MQ=17)


                                       aCGCGCGACATCAGCCCCATGCCCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCa                                                               <  1:2698376/101‑1 (MQ=255)


                                           gcgACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCGGGGCGCCgggc                                                           >  1:3269925/1‑99 (MQ=255)


                                            cgACATTTGCCCCAAGACCGCCGAGGGCCCCAAAGG.CCCTCGG.CCAGCGCCCGCCCCGCGCC.ACTGGCGGGCGG.CCT.TC.C.G.CCCCCCCGGCTGGGCGCCgg                                                             >  1:4909194/1‑101 (MQ=18)


                                            cgACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTTCCCCCCCCCCGC.CCAA.GGGGGGGC.G.CAT.TGCC.C.CCCCCGGGGCGGGGGGCCGGcc                                                           >  1:4855729/1‑101 (MQ=9)


                                                aTCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCCCCGGGGGTGGGGGCCGGCCCCTGt                                                      >  1:5639548/1‑101 (MQ=17)


                                                aTCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCCCCGGGGCTGGGGGCCgggccccgt                                                      >  1:309572/1‑94 (MQ=14)


                                                aTCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCCC.G.CCGCCGGGGCGGGGCGCCggggcccgg                                                      >  2:3474266/1‑94 (MQ=14)


                                                  cAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CCT.TCGC.G.CCGCCGGGGCTGGGCGCCGGCCTCTGTcc                                                    >  1:606449/1‑100 (MQ=255)


                                                     ccccATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCCCCGGGGCCGGGTGCAGGGCTCTCTCA.CGc                                                >  2:833335/1‑101 (MQ=14)


                                                     ccccAAGACCGCCGAGGGCCCCAAAGG.CCCTCGG.CCAGCGCCCGCCCCGCGCC.ACTGGCGGGG.G.CCTCTCGC...CCCCCGGGGGGGGGCGCCgggccccgtcc                                                    >  2:4100284/1‑92 (MQ=18)


                                                      cccATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CCC.CCGA.A.CCCCCCGGGGCGGGCGCCGGCCCCCCTCA.CGcc                                               >  1:4966145/1‑100 (MQ=2)


                                                      cccATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCCCCGGGGCTGGGGGCAGGCCCCTGTCA.CGCt                                               >  1:3528043/1‑101 (MQ=255)


                                                       ccATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGGGCCGGCCTCTGTCA.CGcct                                              >  2:522224/1‑99 (MQ=255)


                                                        cATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGGGCAGGCCTCTGTCA.CGCTT.g                                            >  1:3349996/1‑101 (MQ=255)


                                                          tGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CCC.TCGC.G.CCCCCGCGGCTGGGGGCCGGCCCCCGTCC.CCCCT.GCg                                          >  1:2006132/1‑101 (MQ=14)


                                                           gACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCCGGGCTGGGGGCAGGCCTCTTTCA.CGCTT.TCGa                                         >  1:1187614/1‑101 (MQ=14)


                                                           gACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCCC.CC.A.TGGCGGGC.G.CCT.TCGC.G.CGGCCCGGGCGGGGGGGGGGCCTCTCTCA.CGCAT.GCGa                                         >  2:1898624/1‑101 (MQ=14)


                                                               gccgAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.TCGaaagg                                     >  2:1582057/1‑98 (MQ=255)


                                                                gcggggg.CCCAAGGGCCCCGCGC.CCGCCCCCCCCCCCGC.CC.A.GGGCGGGC.C.CAT.TCGC.G.CCGCGGGGGCGGGGCGAAGGCCTCTGTCA.CGCTT.GCGAAGGc                                     <  2:3960311/97‑1 (MQ=16)


                                                                 gggggg.CCCAAGGC.CCCGCCG.CCCCCCCCCCCCCCCC.CC.C.GGGGGGGG.G.GCT.TCGGGG.CCGCGGGGGGGGGGCGAAGGCCTCTGTCA.CGCTT.GCGAAGGCg                                    <  1:1950304/98‑1 (MQ=255)


                                                                 cgAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.G.CCT.TCCC.G.CCGCCGGGGGTGGGGGCCGGGCCCTGTCA.CGCCT.GCggaagagg                                   >  2:1118110/1‑94 (MQ=14)


                                                                  gAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.G.CCT.TCGC.G.CCCCCGGGGCCGGGGGCCGGCCGCTGTCA.CGCTT.GCGAAGGCGGt                                  >  1:3845715/1‑101 (MQ=17)


                                                                  gAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.G.CCG.TCGT.G.TCACCGGGGCTGGGAGCAGGGCTCCGTTA.CCCCT.TCGGAGGCggg                                  >  2:2257711/1‑100 (MQ=9)


                                                                  gAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCGGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGGggg                                  >  1:2060768/1‑100 (MQ=255)


                                                                   aGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGCgggc                                 >  1:524234/1‑99 (MQ=255)


                                                                    ggg.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CCT.TCGC.G.CCCCCGGGGCTGGGGGCAGGCCTCTGTCA.CGCTT.GCGAAGGGGGGCt                                >  1:545456/1‑101 (MQ=17)


                                                                     gg.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGG.G.CCT.TCGC.G.CCCCCCGGGCTGGGGGCCGGCCCCTGTCA.CGCTT.GCGAAGGCGGGCtt                               >  1:5061851/1‑101 (MQ=17)


                                                                     gg.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGGCCCTGTCA.CGCCT.GCGAAGGCGGGCtt                               >  2:5092608/1‑101 (MQ=17)


                                                                      g.CCAAAAGGCCCCTCGC.CCCCCCCCCCCCCCGC.CC.G.GGGGGGGC.G.CAT.TCGC.G.CCGCGGGGGCGGGGCAAAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCtt                               <  2:2649681/101‑1 (MQ=12)


                                                                       ggcccgaGG.CCCGCGGCCCCGCCCCCCCCCCCC.CC.C.GGGGGGGC.G.CTTGTGGC.G.GCGGGGGGGGGGGGCGAAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCt                                <  1:5502272/95‑1 (MQ=255)


                                                                         tgttgcgccccGCGC.CCGGCGCCCGCCCGGC.CC.A.TGGCGGGC.G.C.T.TCTC.GCCCGCCGGGGC.AGGCCCTGGCCTCTGACATCGCTTGGGGCAGGCGGTCTtg                              <  2:4296239/93‑1 (MQ=18)


                                                                          cAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCTC.G.CCGCCGGGGCTGGGCGCAGGCCCCTGTCA.CGCTT.GCGAAGGCGGGCTTGTGc                           >  2:2688478/1‑101 (MQ=255)


                                                                           aaaGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCTC.G.CCGCCCGGGCTGGGCGCAGGGCCCTGTCA.CCCCT.GCGGAGGGGGGCTtttggc                          >  1:4031303/1‑99 (MQ=14)


                                                                           aaaGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCCGAAGCGGGCTTGTGcc                          >  1:989493/1‑101 (MQ=14)


                                                                              gcccccCCGC.CCCGCCCCCGCCCCGC.GC.G.GGGCGGGC.G.CTT.CCGC.G.CGGCGGGGGCGGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCTTGTGCCCa                        <  2:5639256/98‑1 (MQ=12)


                                                                               g.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.C.CCGCCGGGGCTGGGCGCAGGCCTCTCTCA.CGCCT.GCGAAGGCGGGCTTGTGCCCCcc                      >  1:1698200/1‑101 (MQ=18)


                                                                                 cccTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGG.G.CCGCCGGGGCTGGGGGCAGGCCTCTGTCA.AGCTT.GCGAAGGCGGGCTTTTGCCCAccc                     >  1:2512189/1‑101 (MQ=18)


                                                                                     cGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TTGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCTTGTGCCCACCcccgc                 >  2:3855275/1‑101 (MQ=255)


                                                                                         ccccccccccccccgc.CC.G.GGGGGGGC.G.CTT.CCGC.G.CCGCGGGGGCTGGGCGAAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCTTGTGCCCACCCGCGCGCt              <  2:2398333/95‑1 (MQ=25)


                                                                                         ccTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCGGAGGCGGGCTTGTGCCCACCCgcgcgcc              >  2:2851484/1‑100 (MQ=255)


                                                                                          cTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCTTGTGCCCACCCGCGCGCTg             >  2:3301522/1‑101 (MQ=255)


                                                                                          cTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCCC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGCGGCCTTTTGGCCACCCGCGCGCTg             >  1:2795718/1‑101 (MQ=18)


                                                                                              gcccgcccCGC.CC.A.TGGCGGGC.G.CAA.TAGC.G.CCGCCGGGGCTGGGGGCAGGCCTCTGTCA.CGCCT.GCGAAGGCGGTCTTGTGCCCACCCGCGCGCCGCcgg         >  2:1615784/1‑101 (MQ=21)


                                                                                               cccgccccgc.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGGCTCTGTCA.CGCTT.GCGAAGGCGGGCTTGTGGCCACCCGCGCGCTGGcggg        >  2:479259/1‑101 (MQ=21)


                                                                                                ccgccccgc.cC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGCGGGCTTGTGCCCACCCGCGCGCTGAcgggc       >  1:2231452/1‑101 (MQ=255)


                                                                                                  ccccccc.cc.A.GGGCGGGC.G.GGT.CCGC.G.CGGCGGGGGCGGGGCAAAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCTTGTGCCCACCCGCGCGCTGAcgggcgg     <  2:8857/100‑1 (MQ=255)


                                                                                                   cccccc.gc.A.GGGCGGGC.G.CAT.GGGC.A.ACGCGGGGGAGGAACGAAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCTTGTGCCCACCCGCGCGCTGAcgggcggg    <  2:3591913/101‑1 (MQ=255)


                                                                                                    cccgc.cc.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCTTGTGCCCACCCGCGCGCTGACGGGCGGGa   >  1:3548487/1‑101 (MQ=255)


                                                                                                     ccgc.cc.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCTTGTGCCCACCCGCGCGCTGACGGGCGGGaa  >  1:4954379/1‑101 (MQ=255)


TCTGAGCCGGTTGATTGGCCGAGGCCATCGCC.GAGGCCACGCGCGACATCAGCCCCATGACCGCCGAGGG.CCCAAAGG.CCCTCGG.CCTGCGCCCGCCCCGC.CC.A.TGGCGGGC.G.CAT.TCGC.G.CCGCCGGGGCTGGGCGCAGGCCTCTGTCA.CGCTT.GCGAAGGCGGTCTTGTGCCCACCCGCGCGCTGACGGGCGGGAA  >  NC_014034/2485193‑2485390

Base quality scores:


ATCG

< 3 ≤


ATCG

< 14 ≤


ATCG

< 22 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG