| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,566,557 | +C | 97.6% | intergenic (+29/+165) | purD → / ← sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,566,557 | 2 | .→C | 97.6% | 4.2 ‑2.7 ‑0.7 | 168 | intergenic (+29/+165) | purD/sdaA | phosphoribosylamine‑‑glycine ligase/L‑serine ammonia‑lyase |
| Reads supporting (aligned to +/- strand): new base (44/120): ref base (3/1): total (47/121) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.68e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.13e-01 | ||||||||||
Only 100 of 200 total aligned reads displayed.
ATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GGGG.GCGCTGCCCCC.CTC.CT..G..C.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCT > NC_014034/2566458‑2566648
|
aTGCGATGGTCGATGCGATCGCCTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..g < 1:1875668/101‑1 (MQ=255)
aTGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGACCCC.CTC.TT..g < 1:4335753/101‑1 (MQ=255)
gATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..ggcct < 2:5687034/101‑5 (MQ=39)
aTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..ggcctt < 1:3585313/101‑6 (MQ=38)
aTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..ggcctt < 2:3227032/101‑6 (MQ=38)
aTGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..ggcctt < 1:4189479/101‑6 (MQ=38)
tGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GGGGTGCGCTGCCCCC.CTC.TT..ggccttc < 2:3301833/101‑7 (MQ=255)
ggTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..ggccttcg < 2:5796223/101‑8 (MQ=38)
cGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.cc < 1:2947866/101‑1 (MQ=37)
gcgatgtccTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGTCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAAtt < 1:5501191/93‑1 (MQ=21)
cGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTc < 2:2206998/101‑1 (MQ=37)
gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCa < 2:679278/101‑1 (MQ=37)
gATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCa < 1:4639120/101‑1 (MQ=37)
cGACTGGCCCGGGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCGCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCAccc < 1:1555670/101‑1 (MQ=25)
cGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCAccc < 2:2854771/101‑1 (MQ=37)
gACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCAcccc < 2:1303849/101‑1 (MQ=25)
cTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCAcccccc < 1:2375308/101‑1 (MQ=25)
gCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCggg < 2:558639/101‑1 (MQ=25)
cccGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.a < 1:1160426/101‑1 (MQ=25)
ccaaGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGT.at < 2:3684768/98‑1 (MQ=21)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGGGCGCGCTCTGAGACGAAAAG.GGGG.GCGCGGCCCCC.CTCTTT..G..CGTTCGG.GCACTTCACCCCCCgggcaat > 1:464977/1‑97 (MQ=255)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.atat < 1:739255/101‑1 (MQ=25)
gAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.atat < 1:4816648/101‑1 (MQ=25)
ggggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATAttt < 1:612127/101‑1 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTc < 2:5321542/101‑1 (MQ=21)
gggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTc < 2:1382023/101‑1 (MQ=21)
ggTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCg < 2:3138014/101‑1 (MQ=21)
gTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGAAGAAAAG.GGGG.GCGCTGCCCCC.CCC.TTTGG..C.TTCGGCCCAATCCCCCCCCCgggtcctttgg > 2:2061801/1‑93 (MQ=16)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GGGCTGCCCCC.CCC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGc > 1:2831878/1‑101 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCgggg > 1:1413396/1‑100 (MQ=21)
tCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGc < 2:3323608/101‑1 (MQ=21)
cTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCa < 2:1914657/101‑1 (MQ=21)
tGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCaa < 1:3805170/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCCATTCACCCCCCCGG.AGATTTCGGGCAAGaa > 2:1564995/1‑100 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGAt < 1:1521637/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGAt < 2:552918/101‑1 (MQ=21)
cgccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGAt < 1:2123216/101‑1 (MQ=21)
gccgcGACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATa < 2:1150900/101‑1 (MQ=21)
cgcgACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATaaa < 1:3981860/101‑1 (MQ=21)
gACATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAaagaa < 1:5218538/101‑1 (MQ=21)
aCATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAaagaag < 1:3420105/101‑1 (MQ=21)
cATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAgg < 2:1941308/101‑1 (MQ=21)
cATCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAgg < 1:1479045/101‑1 (MQ=21)
aTCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGt < 2:3351824/101‑1 (MQ=21)
tCGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTc < 1:2857171/101‑1 (MQ=21)
cGGCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCt < 1:3000140/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCtt < 1:485086/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCtt < 1:5350399/101‑1 (MQ=21)
ggCTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGGCtt > 2:3293246/1‑101 (MQ=21)
cTGGCGCGTGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.GCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCtttt < 2:1437643/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCtttt < 2:155874/101‑1 (MQ=21)
cTGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCtttt < 2:4869272/101‑1 (MQ=21)
tGGCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAAGTCATTTc > 2:5260801/1‑101 (MQ=18)
ggCGCGCGCTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTcc < 1:1745297/101‑1 (MQ=21)
gcgcgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCCATTCACCCCCCGGGAAAATTTGGGCCAAGAAAAAAAAGGGTTTTTct > 2:4171903/1‑100 (MQ=9)
gcgcgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:4587556/101‑1 (MQ=21)
gcgcgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCt < 1:2668849/101‑1 (MQ=21)
cgcgcggTCTGAGACG.AAACGGGGG.GCGCAGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:4756132/101‑1 (MQ=21)
cgcgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCtt < 1:4215930/101‑1 (MQ=21)
gcgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:214335/101‑1 (MQ=21)
gcgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCttt < 2:2039042/101‑1 (MQ=21)
cgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 1:993367/101‑1 (MQ=21)
cgcgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTc < 2:4004732/101‑1 (MQ=21)
cgcTCTGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCAt < 1:1003710/101‑1 (MQ=21)
tctGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt > 2:1505667/1‑101 (MQ=21)
tctGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 1:3873153/101‑1 (MQ=21)
tctGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 1:2501970/101‑1 (MQ=21)
tctGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 1:5314409/101‑1 (MQ=21)
tctGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt < 1:2074366/101‑1 (MQ=21)
tctGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCtt > 2:2496858/1‑101 (MQ=21)
tcggagaCG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATGAAGAAGGTCTTTTGCTTACATCtt < 2:173324/98‑1 (MQ=17)
ctGAGACG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTg < 1:5036225/101‑1 (MQ=21)
gagaCG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTTGGGCAAGATAAAGAAGGGCTTTTTCTTTTTTCTTTcc > 2:4983817/1‑101 (MQ=17)
agaCG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGccc > 1:4487235/1‑101 (MQ=21)
gaCG.AAACGGGGG.GCGCTGCCTCT.CTA.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCg < 2:5761941/101‑1 (MQ=21)
gaCG.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CAAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCg < 2:3555961/101‑1 (MQ=21)
g.AAACGGGGG.GCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGaaa < 1:1183627/101‑1 (MQ=21)
aaacggggg.gCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat > 1:802128/6‑101 (MQ=21)
aaacggggg.gCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAat < 2:1746015/96‑1 (MQ=21)
gcagggg.gCGCTG.CCCC.CTC.TT..GGCC.TTTGG.CCAATTCA.CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggg > 2:5474240/4‑101 (MQ=0)
gcagggg.gCGCTG.CCCC.CTC.TT..GGCC.TTTGG.CCAATTCA.CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggg > 1:476340/4‑101 (MQ=0)
acggggg.gCGCTGCCCCC.CTT.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTT.GGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 1:3639029/98‑1 (MQ=21)
cggggg.gCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 1:3815916/99‑1 (MQ=25)
cggggg.gCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATc < 2:3847742/99‑1 (MQ=25)
cagggg.gCGCTG.CCCC.CTC.TT..GGCC.TTTGG.CCAATTCA.CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCgggg > 1:728053/3‑101 (MQ=0)
ggggg.gCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATcc > 2:335983/2‑101 (MQ=25)
agggg.gCGCTGCCCCCTCTT.GG..C..C.TTTGG.CCAATTCA.CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg > 1:1969377/2‑101 (MQ=0)
agggg.gCGCTG.CCCC.CTC.TT..GGCC.TTTGG.CCAATTCA.CCCCTGGG.ATATTTCGGGCAAGAT...GAA.ATCATGCCCCTTCATCTTGCCGCAAATATCCCggggg > 1:3552899/2‑101 (MQ=0)
gggg.gCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc < 1:2242135/101‑1 (MQ=25)
gggg.gCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc < 1:125581/101‑1 (MQ=25)
ggcg.gCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATccc < 2:950081/98‑1 (MQ=25)
ggg.gCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGGCTTTTCCTTTCATCTTGCCCGAAATAACCCg > 1:1221029/1‑101 (MQ=25)
ggg.gCGATGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCg < 1:918241/101‑1 (MQ=25)
g.gCGCTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggg < 1:5368097/101‑1 (MQ=37)
cgcTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCggggg < 2:1271088/101‑1 (MQ=37)
gcTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGa > 2:4478594/1‑101 (MQ=37)
gcTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGa < 2:3056052/101‑1 (MQ=37)
gcTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGa > 1:5471362/1‑101 (MQ=37)
cTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAg > 1:4357674/1‑101 (MQ=37)
cTGCCCCC.CTC.TT..GGCC.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAg > 1:553744/1‑101 (MQ=37)
|
ATGCGATGGTCGATGCGATCGACTGGCCCGAGGGGTTCTGCCGCCGCGACATCGGCTGGCGCGCGCTCTGAGACG.AAAC.GGGG.GCGCTGCCCCC.CTC.CT..G..C.TTCGG.CCAATTCACCCCCCGGG.ATATTTCGGGCAAGATAAAGAAGGTCTTTTCCTTTCATCTTGCCCGAAATATCCCGGGGGAGCCCGCT > NC_014034/2566458‑2566648
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 41 ≤
ATCG
|