| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 2,678,900 | +C | 94.4% | intergenic (+29/+58) | RCAP_rcc02495 → / ← RCAP_rcc02496 | GTPase, EngC family/group 1 glycosyl transferase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 2,678,900 | 1 | .→C | 94.4% | 20.7 ‑3.5 ‑0.3 | 161 | intergenic (+29/+58) | RCAP_rcc02495/RCAP_rcc02496 | GTPase, EngC family/group 1 glycosyl transferase |
| Reads supporting (aligned to +/- strand): new base (107/45): ref base (3/6): total (110/51) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.92e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 5.46e-01 | ||||||||||
Only 100 of 201 total aligned reads displayed.
GCCCGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CG.C.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGA > NC_014034/2678800‑2678995
|
gCCCGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.Cg < 2:3843744/101‑1 (MQ=255)
ccGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CCT.CG.c.c > 2:1085369/1‑101 (MQ=255)
cgACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CG.c.cc.cc < 1:2041575/101‑2 (MQ=255)
gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CG.c.cc.cca < 2:2301839/101‑3 (MQ=255)
gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CG.c.cc.cca < 1:4624605/101‑3 (MQ=255)
gACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGGGGGGG.CAT.CG.c.cc.ccc > 2:3986256/1‑99 (MQ=255)
aCCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CG.c.cc.ccac < 1:2585778/101‑4 (MQ=255)
ccGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CG.c.cc.ccacc > 1:669798/1‑97 (MQ=255)
cgcgCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CG.c.cc.ccaccg < 1:5543108/101‑6 (MQ=255)
cgcgCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CG.c.cc.ccaccg < 2:4409492/101‑6 (MQ=255)
cgcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACcgcg < 1:210986/101‑1 (MQ=255)
gcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCgcgc > 1:2080581/1‑101 (MQ=255)
gcCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCgcgc > 1:3449728/1‑101 (MQ=255)
cTTCGGCAAGATGCCCCGGGCGGCGCTGCGCGCCAAATCCCGGCTGCGCGGCGACTGACGCCGTTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CCCCGCGccc < 2:3644473/101‑1 (MQ=255)
cTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGccc > 2:2113313/1‑101 (MQ=255)
cTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CG.CACC.CACCGCGccc > 1:897735/1‑101 (MQ=255)
cTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACACCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGccc > 2:5757211/1‑101 (MQ=255)
ttCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCg > 1:3859757/1‑101 (MQ=255)
ggCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGAcg > 1:1979929/1‑101 (MQ=255)
ggCAAGAGGCCCCGGGCGGCGCTGCGCAACAAACCCCGGCTGCGCGGCGACGGCCGCCGGTTCGGGGGC.GGGTGGGGG.CATCCC.C.CC.CACCGCGCCCGAcg < 2:1207706/101‑1 (MQ=255)
cAAGATGCCCGGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.GGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGAcgcg < 2:222873/101‑1 (MQ=255)
aaGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGAGCGGCGGCTCACTCCCGTTCCGCGAG.CGGTGGGGG.CGT.CG.C.CCACACCCCGCCCGAagcgc > 2:1673990/1‑101 (MQ=255)
gATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCgcgg < 1:1498431/101‑1 (MQ=255)
tGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCgcggcg < 2:4569310/101‑1 (MQ=255)
ccGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCt > 2:420307/1‑101 (MQ=255)
gggCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTg > 2:313350/1‑101 (MQ=255)
gggCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTg > 1:3313331/1‑101 (MQ=255)
ggcggcGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTgc > 1:3754902/1‑101 (MQ=255)
ggcgCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CATCCC.C.CC.CACCGCGCCCGACGCGCGGCGGGCGTgcccg > 1:5260127/1‑101 (MQ=39)
cTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCa > 2:4195116/1‑101 (MQ=255)
tgggcgACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCTGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCaa < 1:1861481/98‑1 (MQ=37)
tGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTgcccgcccca > 1:1173203/1‑99 (MQ=255)
tGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCaa > 1:1406027/1‑101 (MQ=255)
gcgcGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAag > 1:517270/1‑101 (MQ=255)
cgACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCCCCCAagagg > 2:2681167/1‑98 (MQ=38)
gACAAATCCCGGCTGCGCGGCGACTGGCGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAaggagg < 2:2858507/101‑1 (MQ=255)
aCAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGCCGCGCGGCGGGCTTGCCCGCCCAAGGAggg > 2:5222659/1‑101 (MQ=255)
cAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGGCCGCCCAAGGAgggg > 1:1192681/1‑100 (MQ=255)
cAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGTgc > 2:4087678/1‑101 (MQ=255)
cAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CCGTGGGGG.CATCCC.C.CC.CACCCCGCCCCACGCGCGGCGGCCGTCCCCCCCCAcggtgcgg > 1:1100719/1‑96 (MQ=255)
aaaTCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGgcg < 2:1461469/101‑1 (MQ=255)
acccgggCGGCGCGCCGACTGGCGGCGTTTCGGGGGC.GGGTGGGGC.CATGCC.C.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGcc < 2:5259837/96‑1 (MQ=18)
tCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGccc < 1:4605540/101‑1 (MQ=255)
cccGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CATCCC.C.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGcccc > 1:5774490/1‑101 (MQ=255)
cccGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGcccc > 1:4840473/1‑101 (MQ=255)
cccGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGcccc < 2:513786/101‑1 (MQ=255)
ccGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGccccc > 2:5679616/1‑101 (MQ=255)
ccGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGccccc < 1:993547/101‑1 (MQ=255)
ccGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGccccc < 1:2740155/101‑1 (MQ=255)
gggCTGCGCGGCGCCGGGCGCGGGTTGGGGGGC.CGGGGGGGG.CATCCC.C.CC.CCCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCg < 1:4260537/100‑1 (MQ=18)
cGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCg < 2:462088/101‑1 (MQ=255)
ggCTGCGCGGCGTCCGACGCGGGGT.GGGGGC.CGGGGGGGGACCT.CGCC.CC.CCCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCgg < 1:33905/101‑1 (MQ=12)
ggCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGGGGGCTTGCCCGCCCAAGGAGGGCGCCCCCgg > 1:1354100/1‑101 (MQ=255)
gCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCATGCCCCCCCAAGGAGGGCGCCCCCGGa > 1:3406682/1‑101 (MQ=37)
tGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGAtc > 2:2574084/1‑101 (MQ=255)
cggcgACTGACGCCGTTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAg < 2:3714631/101‑1 (MQ=255)
cggcgACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAg > 1:3348545/1‑101 (MQ=255)
cggcgACTGACGCCGGTTCGGGGGC.CGGGGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAg < 2:185408/101‑1 (MQ=255)
ggcgACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAgc > 2:350299/1‑101 (MQ=255)
gACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCa > 2:1636621/1‑101 (MQ=255)
aCTGCCGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCaa < 1:1688414/101‑1 (MQ=255)
aCTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCaa < 2:4545331/101‑1 (MQ=255)
cTGCCGCCGGTTCGGGGGC.CGGTGGGGC.CAC.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAAc < 2:5507276/101‑1 (MQ=25)
cTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCCAGGGGGGCGCCCCCGGATCTCAGCGCAAc > 2:3786375/1‑101 (MQ=37)
tGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACg > 2:2968921/1‑101 (MQ=255)
tGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACg > 1:1003671/1‑101 (MQ=255)
tGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACg > 1:3652122/1‑101 (MQ=255)
gACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGt > 2:17162/1‑101 (MQ=255)
aCGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTg < 2:5443582/101‑1 (MQ=255)
gCCGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCCAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgcc > 2:195802/1‑101 (MQ=255)
ccGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgccg < 2:3908287/101‑1 (MQ=255)
cGGTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgccgc > 2:5009732/1‑101 (MQ=255)
ggTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTgccgcc > 2:5597762/1‑101 (MQ=255)
ggTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTCCCCGCCCAACGAGGGCGCCCCCGGCTCTCAGCGCAACGTgccgcc > 1:4426144/1‑101 (MQ=25)
gTTCGGGGGC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGccgccc < 1:1720308/101‑1 (MQ=255)
gggggCTCGGGGGGGG.CTC.CGCC.CC.CCCCGCGCCCGGCGCGCGGCGGGCTTGCCCGCCCAAGGAGGTCGCCCCCGGATCTCAGCGCAACGTGCcgcccgcc < 1:4775747/101‑1 (MQ=21)
gggggC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCccgccg > 1:1069426/1‑101 (MQ=255)
gggC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGtc > 1:743758/1‑101 (MQ=255)
ggC.CGGTGGGGG.CATCCC.C.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGtct < 1:1839545/101‑1 (MQ=255)
ggC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGCCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGtct < 2:3436874/101‑1 (MQ=255)
gC.CGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGtctc > 1:3048375/1‑101 (MQ=255)
c.cGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCg > 1:1653796/1‑101 (MQ=255)
c.cGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGACCAAGGAGGGCGCCCCCGGATCTCAGCGCCACACGCCGCCCGCCGtctca > 2:5387070/1‑100 (MQ=25)
cGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGa < 2:2425730/101‑1 (MQ=255)
cGGTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGa > 2:3184911/1‑101 (MQ=255)
ggTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGAc > 1:3194033/1‑101 (MQ=255)
ggTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGAc > 1:800717/1‑101 (MQ=255)
ggTGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGCATCTCAGCGCAACGTGCCGCCCGCCGTCTCGAc > 1:5002863/1‑101 (MQ=255)
ggTGGGGG.CAC.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGAc < 1:1826675/101‑1 (MQ=255)
gTGGGGG.CATCCC.C.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACa < 2:2016209/101‑1 (MQ=255)
tGGGGG.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACaa > 1:4571528/1‑101 (MQ=255)
ggggg.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACaaa > 1:2153629/1‑101 (MQ=255)
ggggg.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACaaa > 1:4080541/1‑101 (MQ=255)
ggggg.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACaaa > 2:1539416/1‑101 (MQ=255)
gggc.CAT.CGCC.CC.CCCCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAg < 2:4707484/101‑1 (MQ=37)
ggg.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGc > 1:2641086/1‑101 (MQ=255)
ggg.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGc > 1:5411610/1‑101 (MQ=255)
gg.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCg > 1:1009063/1‑101 (MQ=255)
gg.CAT.CGCC.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCg > 2:762980/1‑101 (MQ=255)
cAT.CGCC.CC.CCCCGCGCCCCCCGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGa < 2:1100644/101‑1 (MQ=37)
|
GCCCGCGACCGCGCCTTCGGCAAGATGACCCGGGCGGCGCTGCGCGACAAATCCCGGCTGCGCGGCGACTGACGCCGGTTCGGGGGC.CGGTGGGGG.CAT.CG.C.CC.CACCGCGCCCGACGCGCGGCGGGCTTGCCCGCCCAAGGAGGGCGCCCCCGGATCTCAGCGCAACGTGCCGCCCGCCGTCTCGACAAAGCGGA > NC_014034/2678800‑2678995
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 22 ≤
ATCG
< 31 ≤
ATCG
< 39 ≤
ATCG
|