| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 282,550 | +C | 1.3% | intergenic (+91/+132) | mltB → / ← RCAP_rcc00247 | membrane‑bound lytic murein transglycosylase B/NnrU family protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 282,550 | 1 | .→C | 1.3% | 2.2 ‑1.3 ‑0.2 | 225 | intergenic (+91/+132) | mltB/RCAP_rcc00247 | membrane‑bound lytic murein transglycosylase B/NnrU family protein |
| Reads supporting (aligned to +/- strand): new base (3/0): ref base (131/91): total (134/91) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.74e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.21e-01 | ||||||||||
Only 100 of 282 total aligned reads displayed.
CAAAGGTTGATCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCGC.GGGCGGGGAAACGCCT > NC_014034/282450‑282650
|
cAAAGGTTGATCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCa > 2:5721892/1‑101 (MQ=255)
agggTTGATCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tg < 1:1255246/99‑1 (MQ=255)
aaGGTTGATCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tg > 2:2766643/1‑101 (MQ=255)
aGGTTGATCGGGCCGGGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tgg < 1:4754079/101‑1 (MQ=255)
ggTTGATCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCC.Tggc > 2:5038038/1‑101 (MQ=255)
tGATCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tggcggg > 2:4505075/1‑101 (MQ=255)
gATCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tggcgggg > 1:1357989/1‑100 (MQ=255)
gATCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tggcgggg > 2:5242506/1‑100 (MQ=255)
gATCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.Tggcgggc > 1:2588696/1‑101 (MQ=255)
tCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGgggc > 1:1117215/1‑101 (MQ=255)
cTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCt > 2:228783/1‑101 (MQ=255)
cTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCt > 1:4866828/1‑101 (MQ=255)
tgcccgacaccATCGCCGAGGACCTGCGGGACATCAGCACCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCtt < 2:3790055/92‑1 (MQ=17)
ggCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTtc > 1:1176533/1‑101 (MQ=255)
ggCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCGtc > 2:1933009/1‑101 (MQ=255)
ggCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCCtc > 1:1853161/1‑101 (MQ=255)
cGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTtctcc > 1:829862/1‑100 (MQ=255)
cGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTtcccc > 2:4673026/1‑98 (MQ=255)
cGAGGCCACCGCCGGGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTcg < 2:2695737/101‑1 (MQ=255)
gAGCCCATGGCCGAGGCCCTGGGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTcgc < 1:2073208/101‑1 (MQ=255)
ggCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTcgccc > 1:3177856/1‑101 (MQ=255)
gCCATCGCCGGGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTcgcccg < 1:2973382/101‑1 (MQ=255)
gCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCCTCTcgcccc > 2:3942591/1‑100 (MQ=255)
gCCATCGCCGAGCCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTcgcccg < 2:3618676/101‑1 (MQ=255)
aTCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCcccccg > 2:403947/1‑101 (MQ=255)
ccttggCCCTGCGCGACATTTGCCCCAAGACCGCCGAGGGCCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCGCCACTGGCGGGGCCGTCTcggccacccc > 2:1603809/5‑99 (MQ=21)
ccgggccccTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGAc < 1:5704168/95‑1 (MQ=255)
ggggCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACgg < 1:561538/99‑1 (MQ=255)
gAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGGGCCTCTCGGCCGCCCGGGCgg > 2:4090647/1‑101 (MQ=17)
gAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGGGCCTCTCGCCCGCCCGGACgg > 2:2180563/1‑101 (MQ=255)
gAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTcgccccccccgaccg > 1:1996095/1‑94 (MQ=255)
aGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCCCCCCCCcgggccgg > 1:3899615/1‑96 (MQ=17)
ggCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGGGCTTCTCGCCCGCCGGGGCgggg > 1:5061146/1‑100 (MQ=255)
ggCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGgc < 1:5202333/101‑1 (MQ=255)
gccccTGCGGGACACCAGCCCCGTGACCGCCG.GAGGCCCAAGGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGgc < 2:4861693/99‑1 (MQ=255)
gCCCTGCGGGACATCAGCCCCGTGCCCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGgcg < 2:1375625/101‑1 (MQ=255)
ccTGCGGGACATCAGCCCCGGGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGcc < 1:416059/101‑1 (MQ=255)
cTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCCCCCGGGGGGGCGCCg > 2:5150592/1‑101 (MQ=17)
tGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCgg < 2:4429102/101‑1 (MQ=255)
gCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCCGc > 2:1987008/1‑101 (MQ=255)
gggACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCct > 1:3452245/1‑101 (MQ=255)
cATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGt > 2:1239797/1‑101 (MQ=255)
aTCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCTGtt > 1:1656624/1‑101 (MQ=255)
tCAGCCCCGGGACCCCCG.GAGGCCAAAAGGCCCCCGGCCAGCCCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTc < 1:5338604/101‑1 (MQ=14)
cAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGGGCTTCTCGCCCGCCGGGGCGGGGGCCGGCCTCTGtttc > 1:4249638/1‑99 (MQ=255)
cgCCGCGTGCCCCCCG.GAGGCACAAAGGCCCTCGGCTGGCGCCCGCCCCGC.CCA.TGGCGGCCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTccc < 2:5433936/100‑1 (MQ=14)
aGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGGCGGGGGCCGGCCCCCGTTccc > 1:1985760/1‑101 (MQ=14)
aGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTccc > 2:3294857/1‑101 (MQ=255)
cccGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCcccg > 2:5382389/1‑101 (MQ=255)
cccGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCCCTGTTCCcccg > 1:218987/1‑101 (MQ=255)
ccGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCcccgg > 1:4645918/1‑100 (MQ=255)
cgggcccgccg.GGGGCCCAAAGGCCCCCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTg < 1:1209364/96‑1 (MQ=255)
cgggACCGCCG.GAGGCCCAAGGGCCCGCGCCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTg < 1:5242796/98‑1 (MQ=17)
cGTGACGCCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTg < 1:924960/101‑1 (MQ=255)
cGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCTCCCCCCCGGACGCGGGGCCGCCTCTGCTCCcgcggg > 2:92334/1‑99 (MQ=14)
cGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGACTCCGTTCCCGCGTg > 2:4777478/1‑101 (MQ=255)
tGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCCCCGGGACGGGGGCCGGCCCCCGTTCCCCCGTggg > 1:1559547/1‑99 (MQ=14)
gcccgccg.GAGGCCCAAGGGCCCTCGGCCGGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTgaga < 1:2485870/99‑1 (MQ=255)
gACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGG.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTgaga > 2:2955730/1‑101 (MQ=255)
gACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGGTTCTCGCCCGCCGGGGCGGGCGGCGGCCTCTGTTTCCGCGTgaga > 2:1519096/1‑101 (MQ=14)
gACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGGGCCGGCCTCTGTTTCCGCCTggga > 2:3494029/1‑101 (MQ=14)
gccg.GAGGCCCAAAGGCCCTCGGCCGGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAAc < 1:1470842/101‑1 (MQ=255)
gccg.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCTCTGTTCCCGCGTGAGGCAAc > 1:4299477/1‑101 (MQ=255)
ccg.GAGGCCCAAAGGCCCGCGGCCGGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAAcc < 2:5701958/101‑1 (MQ=255)
cg.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGGGAGACAACCg > 2:4613505/1‑101 (MQ=255)
g.gAGGCCCAAGGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCgg < 1:3632782/101‑1 (MQ=255)
cccAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGGGCTTTTCCCCCCCCGGGCCGGGGGCCGGCCCCTGTTCCCCCCGGGGCCAACCGGCCTtg > 1:4542932/1‑101 (MQ=2)
cAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGGGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTtgtg > 2:5328136/1‑101 (MQ=255)
aaggccccTCGGCCCGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTgg < 1:615319/96‑1 (MQ=255)
aaGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTTTTCCCGCGGGAGACAACCGGCCTTGGGGc > 1:2690722/1‑101 (MQ=17)
agccccTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCa < 1:3029872/98‑1 (MQ=255)
aGGCCCTCGGCCAGCGCCCGCCCCGC.CCC.TGGCGGGCGCCTCTCGCCCCCCGGGGCCGGCGCCGGCCTCTGTTCCCCCGTCAGACAACCGGGCTTGTGGCa > 2:4302973/1‑101 (MQ=17)
gCCCCCGCCCCGCCCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAAt < 2:4944321/101‑1 (MQ=21)
cccCCGGCCGGCGCCCCCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAAtg < 1:5731736/101‑1 (MQ=255)
ctggcccAGCCCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAAtgct < 2:1205387/96‑1 (MQ=255)
tCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTAGCCCGCCGGGACGGGCGCCGGCCTCTGGTCCCGCGTGAGACAACCGGTCTTGTGGCAAtgctg > 2:616128/1‑101 (MQ=255)
ccgcccAGCCCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAAtgctg < 2:4711695/97‑1 (MQ=255)
ggccgccccccgccccgc.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTgcg < 1:3693226/93‑1 (MQ=255)
ggccgccccccgccccgc.CCA.TGGCGGCCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTgcg < 2:5487031/93‑1 (MQ=255)
ggCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTgcg > 2:3000158/1‑101 (MQ=255)
ggCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTgcg > 2:2611753/1‑101 (MQ=255)
ggCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTgcg > 2:2570333/1‑101 (MQ=255)
gCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTgcgc > 1:3702982/1‑101 (MQ=255)
ccggcccccgccccgc.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGTTGcgcc < 2:2413525/95‑1 (MQ=255)
ccgcgcCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGcgccg < 2:1641093/99‑1 (MQ=255)
ccgcccccgcccccc.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGcgccg < 2:3241319/96‑1 (MQ=255)
cgcccgccCCGC.CCA.TGGCGGGCGCTTCTCGCCCCCCCGGGCGGGGGCCGGCCCCCGTTTCCCCGCGGGACAACCGGGCCTTTGGCGATGCCGCGCCcc.gg > 1:2147774/1‑101 (MQ=9)
gcccgcccCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGGCGGGCGCCGGCCCCTCTTCCCGCGTGAGACAACCGGTCTTGTTGCAATGCTGCGCCgc.ggc > 2:4446239/1‑100 (MQ=21)
gcccgcccCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCCGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCgc.ggg > 1:2306367/1‑101 (MQ=255)
cccccccccgc.CCG.CGGCGGCCGCTTCCGCCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGCCAACCGGTCTTGTGGCAATGCTGCGCCgc.ggg < 2:603894/100‑1 (MQ=21)
cccgccccgc.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCgc.gggg > 2:1319844/1‑100 (MQ=255)
cccgccccgc.CCA.GGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCgc.gggc < 1:2899576/101‑1 (MQ=255)
cccgc.ccA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCGC.GGGCGGGGa > 1:1316526/1‑101 (MQ=255)
cccgc.ccA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCGC.GGGCGGGGa > 2:2812059/1‑101 (MQ=255)
cgc.ccG.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCCCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCGC.GGGCGGGGaaa < 2:3118893/101‑1 (MQ=255)
cgc.ccA.TGGCGGCCGCTTCCCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCGC.GGGCGGGGaaa < 2:1796322/101‑1 (MQ=255)
gc.ccA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCGC.GGGCGGGGGAAc > 2:5665707/1‑101 (MQ=255)
gc.ccA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCGC.GGGCGGGGAAAc < 1:4763467/101‑1 (MQ=255)
cc.ccA.GGGCGGCTGCTGCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCGC.GGGCGGGGAAAc < 2:1863470/100‑1 (MQ=37)
a.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGGCTCTGTTCCCGCGTGAGACAACCGGGCTTGTGGCAATGCTGCGCCGCGGGGGGGGGAAACGcc > 2:5554736/1‑101 (MQ=25)
|
CAAAGGTTGATCTGGCCGAGGCCATCGCCGAGGCCCTGCGGGACATCAGCCCCGTGACCGCCG.GAGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC.CCA.TGGCGGGCGCTTCTCGCCCGCCGGGACGGGCGCCGGCCTCTGTTCCCGCGTGAGACAACCGGTCTTGTGGCAATGCTGCGCCGC.GGGCGGGGAAACGCCT > NC_014034/282450‑282650
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 23 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|