| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,532,987 | +G | 89.7% | intergenic (‑6/‑19) | RCAP_rcc03340 ← / → RCAP_rcc03341 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,532,987 | 1 | .→G | 89.7% | 64.7 ‑1.3 ‑0.8 | 213 | intergenic (‑6/‑19) | RCAP_rcc03340/RCAP_rcc03341 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (104/87): ref base (9/13): total (113/100) | ||||||||||
| Fisher's exact test strand distribution p-value = 2.64e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.65e-01 | ||||||||||
Only 100 of 241 total aligned reads displayed.
AGCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTC.GGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.GGC.CC..GCCCTTCGATCCAGTGCAGCCAACCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.CTGCGCGCCCGGCAGGGCCGCCAGATCGTGCC > NC_014034/3532888‑3533081
|
aGCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGc < 1:2736573/101‑1 (MQ=255)
gCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.g < 1:3627619/101‑1 (MQ=255)
gCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.g < 2:518475/101‑1 (MQ=255)
ggggAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.ggg > 2:4360632/1‑100 (MQ=255)
ggggAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.ggg > 2:4109729/1‑100 (MQ=255)
gggAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.gggc > 1:4155490/1‑99 (MQ=255)
ggAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Ggg.cc < 2:2315018/101‑1 (MQ=255)
aaaGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Ggg.cccg > 1:919350/1‑99 (MQ=255)
aaaGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Ggg.cccg > 2:4413478/1‑99 (MQ=255)
aaGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Ggg.cccgg > 1:5509952/1‑98 (MQ=255)
aaGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Ggg.cccgg > 1:3460515/1‑98 (MQ=255)
aGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Ggg.cccggc > 2:2758765/1‑97 (MQ=255)
gcgcCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Ggg.cccggccctt > 1:4614977/1‑93 (MQ=255)
gcgcCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.Ggg.cccggccctt < 2:2011520/101‑9 (MQ=255)
cgcCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTc < 2:1904601/101‑1 (MQ=255)
gcCTGGCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCg < 2:628104/101‑1 (MQ=255)
cggTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGAt < 1:3993871/99‑1 (MQ=255)
cTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGAt < 1:3859205/101‑1 (MQ=255)
cTGTCGGTCCAGCCGACCGAAACCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGAt < 2:4984165/101‑1 (MQ=255)
ggTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGt > 1:1060000/1‑101 (MQ=255)
gTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTg > 1:3005844/1‑101 (MQ=255)
gTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTg < 1:801899/101‑1 (MQ=255)
tCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGc < 2:3520808/101‑1 (MQ=255)
tCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGc > 2:5549362/1‑101 (MQ=255)
ccAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCa > 1:5400715/1‑101 (MQ=255)
cAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAg > 1:1111001/1‑101 (MQ=255)
aGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGc > 1:2374705/1‑101 (MQ=255)
gCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGcc < 1:2494364/101‑1 (MQ=255)
cgaccgaAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCCATCCAGTGCAGCCag < 1:4877848/101‑2 (MQ=255)
gaccgaAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCagc > 1:1390829/1‑99 (MQ=255)
gaccgaAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCagc > 1:3045366/1‑99 (MQ=255)
gaccgaAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCagc < 2:799687/101‑3 (MQ=255)
gaccgaAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGAGCCAACGCGACGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCCGCCagc > 2:2279148/1‑99 (MQ=255)
cccgaAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGcc < 2:3754567/100‑1 (MQ=255)
accgaAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGcc < 2:2544738/101‑1 (MQ=255)
aaGCAGCCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCt > 2:4604108/1‑101 (MQ=255)
agcagcGGTGCCTCGGCCAGCCGGTGGGCG.GGGGCGAGCTGCCCCATCGCGGCGCAAAGTTGCGGGCGCG..GCCCGTTGATCCAGTGCAGCCAGCCGGCCTc < 2:4824871/101‑1 (MQ=255)
agcagcCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTc > 2:3655793/1‑101 (MQ=255)
gcagcCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCg < 1:287595/101‑1 (MQ=255)
gcagcCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCg < 1:5555229/101‑1 (MQ=255)
cagcCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGa < 1:560710/101‑1 (MQ=255)
gcCGCGGCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGGGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAcc < 2:5641433/101‑1 (MQ=255)
gcCGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGAcc < 2:4266942/101‑1 (MQ=255)
ccGCGCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCg < 2:5400425/101‑1 (MQ=255)
cgcgCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGc > 1:4694919/1‑101 (MQ=255)
cgcgCCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGc > 2:1224960/1‑101 (MQ=255)
cgcCTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCaa < 2:1842239/101‑1 (MQ=255)
cgcCTCAGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCaa < 1:4327761/101‑1 (MQ=255)
cTCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCg > 2:5748747/1‑101 (MQ=255)
tCGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGt > 1:3734293/1‑101 (MQ=255)
cGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTc > 1:1619339/1‑101 (MQ=255)
cGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTc < 2:4568017/101‑1 (MQ=255)
cGGCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTc > 1:1909139/1‑101 (MQ=255)
ggCCAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCg > 2:123146/1‑101 (MQ=255)
ggCCAGCCGG.GGCTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCg > 1:3125542/1‑101 (MQ=255)
ccAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcc < 2:4694638/101‑1 (MQ=255)
ccAGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcc > 1:78730/1‑101 (MQ=255)
aGCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGcccc > 2:1444236/1‑101 (MQ=255)
gCCGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCg < 1:5218224/101‑1 (MQ=255)
ccGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGc > 2:1597713/1‑101 (MQ=255)
ccGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGc > 1:4440780/1‑101 (MQ=255)
cGG.GGGTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGca > 2:2950411/1‑101 (MQ=255)
g.gggTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcaca > 2:4476152/1‑101 (MQ=255)
g.gggTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcaca < 1:11874/101‑1 (MQ=255)
g.gggTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGcaca < 2:1006138/101‑1 (MQ=255)
gggTCGGGGGCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAg < 1:213489/101‑1 (MQ=255)
atccttgtggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAg > 2:3558010/9‑101 (MQ=255)
ggtcgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.a > 2:3860445/6‑101 (MQ=255)
gtcgggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.At < 1:391729/97‑1 (MQ=255)
gggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.cct > 2:3205563/2‑99 (MQ=255)
gggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.cct < 1:1535357/100‑3 (MQ=255)
gggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.cct > 1:655545/2‑99 (MQ=255)
ggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.cctg > 2:240856/1‑98 (MQ=255)
ggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.cctg > 2:1711319/1‑98 (MQ=255)
ggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.cctg < 1:985684/101‑4 (MQ=255)
ggggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.cctg > 1:853962/1‑98 (MQ=255)
gggCGATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.cctgc < 2:2832866/101‑5 (MQ=255)
ggCGATCGGCGCCATCGCGGCGCAAAGCGGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.cctgcg < 1:2279274/101‑6 (MQ=255)
cGATCTGCGCCATCGCGGCGCAAAGCTGC.GGC.CCCGGCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTgcgcg < 1:5318191/101‑1 (MQ=255)
gATCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACCG.ATCCTgcgcgc > 2:1923493/1‑101 (MQ=255)
aTCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGcc < 1:1714678/101‑1 (MQ=255)
aTCTGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGcc > 2:877582/1‑101 (MQ=255)
tGCGCCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCgg < 2:3350553/101‑1 (MQ=255)
cgcCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCa > 2:5625881/1‑101 (MQ=255)
cgcCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCa < 2:4289772/101‑1 (MQ=255)
cgcCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCa < 1:1005352/101‑1 (MQ=255)
gcCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTGGGTCCACTGCGCCCAGCCGCTTTCGATCGCACCTCTCGCCCCTCACAGCCC.CTTCGCGCCCGCCAg > 2:5443255/1‑101 (MQ=255)
gcCATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAg > 1:5334971/1‑101 (MQ=255)
ccATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAgg > 1:5113208/1‑101 (MQ=255)
cATCGCGGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAggg > 1:5740378/1‑101 (MQ=255)
cgcgGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAGGgccg > 1:519675/1‑101 (MQ=255)
cgcgGCGCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAGGgccg > 1:4050970/1‑101 (MQ=255)
gcggcgCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAGGgccgc > 2:1122194/1‑101 (MQ=255)
ggcgCAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAGGGGCGCCa > 2:1151806/1‑101 (MQ=255)
gcgcAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAGGGCCGCCAg > 2:2367373/1‑101 (MQ=255)
cAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAGGGCCGCCAGATc > 2:4000402/1‑101 (MQ=255)
cAAAGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAGGGCCGCCAGATc < 1:5278117/101‑1 (MQ=255)
aaaGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAGGGCCGCCAGATCg < 2:5284589/101‑1 (MQ=255)
aaaGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAGGGCCGCCAGATCg > 1:4384700/1‑101 (MQ=255)
aaGCTGCGGGC.CCG.GCCCTTCGATCCAGTGCAGCCAGCCGTCCTCGACCGCAACCGTCGCCCCGCACAG.ATCCTGCGCGCCCGGCAGGGCCGCCAGATCGt > 2:3118445/1‑101 (MQ=255)
|
AGCGGGGAAAGCGGCGCCTGTCGGTCCAGCCGACCGAAAGCAGCCGCGCCTCGGCCAGCCGG.GGGTC.GGGGCGATCTGCGCCATCGCGGCGCAAAGCTGC.GGC.CC..GCCCTTCGATCCAGTGCAGCCAACCGTCCTCGACCGCAACCGTCGCCCCGCACAG.AT.CTGCGCGCCCGGCAGGGCCGCCAGATCGTGCC > NC_014034/3532888‑3533081
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|