| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 963,936 | +CCCC | 100% | intergenic (+23/‑78) | RCAP_rcc00874 → / → atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 963,936 | 1 | .→C | 100.0% | 90.3 | 24 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (0/24): ref base (0/0): total (0/24) | ||||||||||
| * | NC_014034 | 963,936 | 2 | .→C | 100.0% | 89.6 | 24 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (0/24): ref base (0/0): total (0/24) | ||||||||||
| * | NC_014034 | 963,936 | 3 | .→C | 100.0% | 89.3 | 24 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (0/24): ref base (0/0): total (0/24) | ||||||||||
| * | NC_014034 | 963,936 | 4 | .→C | 100.0% | 88.3 | 24 | intergenic (+23/‑78) | RCAP_rcc00874/atzB | inositol monophosphatase/hydroxydechloroatrazine ethylaminohydrolase |
| Reads supporting (aligned to +/- strand): new base (0/24): ref base (0/0): total (0/24) | ||||||||||
GCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCG....CCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATGCG > NC_014034/963836‑964018
||||
gCATATCGGGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg < 2:2786050/101‑1 (MQ=255)
cATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....c < 2:3290880/101‑1 (MQ=255)
atatCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....cc < 2:4363301/101‑1 (MQ=255)
cGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....cccccc < 2:2529441/101‑5 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 2:3409917/101‑9 (MQ=255)
gcgggcggGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaac < 1:4423669/101‑9 (MQ=255)
cgggcgggTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTgccg....ccccccgaacc < 1:1143895/101‑10 (MQ=255)
tcTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGGGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCcccgcccg < 2:4374515/100‑1 (MQ=255)
cggcggcCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGTTGCCGCCCCCCGAACCCCCCGCCCGAAggg < 2:935237/101‑1 (MQ=255)
gcggcCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGc < 1:4132509/101‑1 (MQ=255)
ggcCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGccc < 2:4188338/101‑1 (MQ=255)
gTGCATGGGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGCGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCg < 2:5458934/101‑1 (MQ=255)
cATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGAc < 1:2745426/101‑1 (MQ=255)
gcggcgATGGCGGTCCTGAACGGTTGGGGGGGAAGGTGGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTcccc < 1:5574292/101‑1 (MQ=255)
cggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCg < 2:330900/101‑1 (MQ=255)
cggcgATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCg < 2:3302773/101‑1 (MQ=255)
ggggATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGa < 2:1034535/98‑1 (MQ=255)
aTGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAgggg < 1:5341582/101‑1 (MQ=255)
aTGCCGGTCCTGAACGGCTGAGGGGGAAGGTGGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAgggg < 2:207451/101‑1 (MQ=255)
tGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGa < 1:833998/101‑1 (MQ=255)
gCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAtt < 2:2878499/101‑1 (MQ=255)
gTCCTGCACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCTGGCCCCTTCGGACTTCCCCGAGGGGAttgcg < 1:3274662/101‑1 (MQ=255)
gTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcg < 2:370594/101‑1 (MQ=255)
tGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGAttgcgttgc < 2:5281060/101‑1 (MQ=255)
ggCTGAGGGGGAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCggg < 2:4040615/101‑1 (MQ=255)
gggggAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCAt < 1:3713722/101‑1 (MQ=255)
gggAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCt < 1:1670176/101‑1 (MQ=255)
ggAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTg < 1:1370178/101‑1 (MQ=255)
ggAAGGTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTg < 1:3152140/101‑1 (MQ=255)
aaGCTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGAt < 2:239080/101‑1 (MQ=255)
ggTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATGc < 2:3178580/101‑1 (MQ=255)
gTCGGGGGGCTGCCGCCCCCCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATGCg < 2:1179562/101‑1 (MQ=255)
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GCATATCGTGGCGGGCGGGTGCTGGCGGCGGCCAATGCCGAGGTGCATGCGGCGGCGATGGCGGTCCTGAACGGCTGAGGGGGAAGGTCGGGGGGCTGCCG....CCGAACCCCCCGCCCGAAGGGGCCCTCGGGCCCCTTCGGACTTCCCCGAGGGGATTGCGTTGCGCGGGAGGCATCTGATGCG > NC_014034/963836‑964018
Base quality scores:
ATCG
< 3 ≤
ATCG
< 17 ≤
ATCG
< 24 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|