New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 974307	3 (0.010)	13 (0.050)	6/172	36.1	0.33	intergenic (+187/+72)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
	?	NC_014034	2880557 =	51 (0.170)					coding (1028/1053 nt)	pdxA	4‑hydroxythreonine‑4‑phosphate dehydrogenase
Rejected: Position hash score below cutoff.

TCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG.....................  >  NC_014034/974199‑974307 ................................................................................................CAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGG  >  NC_014034/2880557‑2880577                                                                                                                                                 CCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTC                    >  2:1779418/1‑101 (MQ=0)              CCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCC                   <  1:5580254/101‑1 (MQ=0)                CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTGCGG                 >  2:5365681/1‑101 (MQ=0)                CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGG                 <  1:1783365/101‑1 (MQ=0)                CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGG                 <  1:3857296/101‑1 (MQ=0)                CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGG                 <  2:2387074/101‑1 (MQ=0)                 CCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGG                >  1:1660081/1‑101 (MQ=0)                   AGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGG              <  1:5698909/101‑1 (MQ=0)                     CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCg            <  2:1544060/101‑2 (MQ=0)                     CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGGCCGGGGGCg            >  1:3879591/1‑100 (MQ=0)                      GTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCgg           >  1:3688499/1‑99 (MQ=0)                            GCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCC     <  1:773006/101‑1 (MQ=0)                               CCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGG  >  1:3112911/1‑101 (MQ=0)                                                                                                                                     TCGCCCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG.....................  >  NC_014034/974199‑974307 ................................................................................................CAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGG  >  NC_014034/2880557‑2880577 Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG