New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 974307	3 (0.010)	19 (0.070)	17/188	29.4	0.28	intergenic (+187/+72)	RCAP_rcc00884/RCAP_rcc00885	hypothetical protein/hypothetical protein
	?	NC_014034	3276370 =	94 (0.320)					intergenic (‑122/+127)	RCAP_rcc03082/RCAP_rcc03083	lipoprotein/membrane bound YbgT‑like protein
Rejected: Position hash score below cutoff.

CCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG...............................................................................................  >  NC_014034/974205‑974307 ..................................................................................................CCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGTCGCCGCGCGGCCGCGCGGCGAAACAAAGGACCGACCGGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAA  >  NC_014034/3276370‑3276464                                                                                                                                                                                                               CCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTC                                                                                              >  2:1779418/1‑101 (MQ=0)        CCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCC                                                                                             <  1:5580254/101‑1 (MQ=0)          CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTGCGG                                                                                           >  2:5365681/1‑101 (MQ=0)          CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGG                                                                                           <  1:1783365/101‑1 (MQ=0)          CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGG                                                                                           <  2:2387074/101‑1 (MQ=0)          CCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGG                                                                                           <  1:3857296/101‑1 (MQ=0)           CCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGG                                                                                          >  1:1660081/1‑101 (MQ=0)             AGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGG                                                                                        <  1:5698909/101‑1 (MQ=0)               CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCG                                                                                      <  2:1544060/101‑1 (MQ=0)               CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGGCCGGGGGCG                                                                                      >  1:3879591/1‑101 (MQ=0)                GTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGG                                                                                     >  1:3688499/1‑101 (MQ=0)                  ATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGGCCGGGGGCGGgg                                                                                   >  1:5292827/1‑99 (MQ=0)                     TGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGGCCGGGGGCGGAGCCC                                                                                >  1:4107503/1‑101 (MQ=0)                      GCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCC                                                                               <  1:773006/101‑1 (MQ=0)                         CCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGG                                                                            >  1:3112911/1‑101 (MQ=0)                           AAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGGCCGGGGGCGGAGCCCCCGGCG                                                                          >  1:718913/1‑101 (MQ=0)                               AAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGgg                                                                      >  2:420525/1‑99 (MQ=0)                                 AAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGgggg                                                                    >  1:2410468/1‑97 (MQ=0)                                  AGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGgccgc                                                                   >  2:712350/1‑96 (MQ=0)                                                                                                                                                                                                         CCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG...............................................................................................  >  NC_014034/974205‑974307 ..................................................................................................CCGGGGGTCCGGGGGCGGAGCCCCCGGCGGGTCGCCGCGCGGCCGCGCGGCGAAACAAAGGACCGACCGGGCAGCCCCCCGGTCGGCCAGTGAACCCGAAA  >  NC_014034/3276370‑3276464 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG