BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1397567 =	171 (0.920)	113 (0.610)	41/128	9.8	0.43	coding (1449/1578 nt)	RCAP_rcc01307	hypothetical protein
*	?	NC_014034	= 1397797	133 (0.460)	113 (0.610)	41/128	9.8	0.43	intergenic (+101/+1797)	RCAP_rcc01307/RCAP_rcc01309	hypothetical protein/IS66 family transposase
Rejected: Position hash score below cutoff.

Only 100 of 334 total aligned reads displayed.


CCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTAC  >  NC_014034/1397467‑1397667


  gTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTc                                                                                                    >  1:4180537/1‑101 (MQ=255)


   tcatcaCCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCg                                                                                                   <  2:2475402/101‑1 (MQ=255)


     atccCCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCt                                                                                                 <  1:2190789/101‑1 (MQ=255)


      ccaccacGCAACCCCCCGGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTc                                                                                                <  2:5481547/100‑1 (MQ=255)


       cactacGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTcc                                                                                               >  2:4322439/1‑101 (MQ=255)


       caccacGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTcc                                                                                               <  2:5085233/101‑1 (MQ=255)


        accacGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTccc                                                                                              <  1:3321922/101‑1 (MQ=255)


           acGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTcccccc                                                                                           >  2:901066/1‑101 (MQ=255)


           acGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTcccccc                                                                                           >  2:2313764/1‑101 (MQ=255)


            cGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCcg                                                                                          <  1:380966/101‑1 (MQ=255)


             gCAACCGCCCTGCCCCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCcgc                                                                                         <  2:3729998/101‑1 (MQ=255)


              cAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCcgcg                                                                                        <  1:4773674/101‑1 (MQ=255)


                aCCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGGGCCGCGCT.GG.CGTCGCTCCCCCCGCggg                                                                                      >  2:1932552/1‑101 (MQ=255)


                   gCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGc                                                                                   >  1:796788/1‑101 (MQ=255)


                   gCCCGGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGc                                                                                   <  1:3957730/101‑1 (MQ=255)


                      cTGCACAACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGGTCATG.GC.C..CGCCTC.AGTGCACCGCT.GA.CGTCGCCCCCCCCCCGGGGGCggg                                                                                >  2:157671/1‑99 (MQ=25)


                       ggaacaggatgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGC.TC.GA.C..CGAGTT.CACGGCGGGCT.AT.CGTCGCTCCCCCCGCGGGGGCGTGGa                                                                              <  1:1010202/91‑1 (MQ=2)


                        gCACCACCGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGa                                                                              <  2:5194685/101‑1 (MQ=255)


                         caccacCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                             <  2:3292588/101‑1 (MQ=255)


                          ccgctgcgTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  1:2078904/94‑1 (MQ=0)


                           tcgagcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                            <  2:5621194/95‑1 (MQ=0)


                           cgctgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                           <  2:682534/95‑1 (MQ=2)


                           ccaccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                           >  2:5314202/1‑101 (MQ=255)


                            cgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTGATGACCA.G.AT.C..CGCAAT.CG.GCCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                          <  1:2242879/97‑1 (MQ=0)


                            ccccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAA.CTGACCCGGCAC.C..GGCCTA.TGCGCTG.GAC.GT.GGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                         >  1:1842902/3‑101 (MQ=2)


                             cccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                         <  2:4689789/100‑1 (MQ=255)


                              agcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                         <  1:2670299/98‑1 (MQ=2)


                                ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCGC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                                                      <  1:929925/101‑1 (MQ=255)


                                cgTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                                       <  2:4198967/100‑1 (MQ=2)


                                 gacGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaa                                                                     >  2:3492002/3‑100 (MQ=255)


                                 gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGC.TC.GA.C..CGAGTT.CACGGCGGGCT.AT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcggg                                                                    >  2:4707655/1‑98 (MQ=2)


                                 gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                                     <  1:4666627/101‑1 (MQ=2)


                                 gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                                     >  2:1055317/1‑101 (MQ=255)


                                 gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCC.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                                     <  1:531319/101‑1 (MQ=255)


                                  tCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaa                                                                     >  2:4563723/1‑100 (MQ=2)


                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGC.TC.GA.C..CGAGTT.CACGGCGGGCT.AT.CGTCGCTCCCCCCGCGGGGGCGGGGGTCGaaaaggggc                                                                  >  1:4491237/1‑95 (MQ=2)


                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaa                                                                    >  1:1613898/1‑99 (MQ=2)


                                   cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaa                                                                    >  2:1224800/1‑99 (MQ=2)


                                      tCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCT..GT.C..GGCCGCGAACACCGATAC.CG.CGGCGCTCCCCCCGCGGGGGCGGGGATCGAAACATcgttc                                                                >  2:2835365/1‑97 (MQ=2)


                                      tCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCcgcg                                                                >  1:5073642/1‑101 (MQ=255)


                                      cccccccGCGGGGGCGTGGATCGAAACACCCCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatg                                                                <  2:5013856/100‑5 (MQ=2)


                                      cccccccGCGGGGGCGTGGATCGAAACACCCCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatg                                                                <  2:4630797/100‑5 (MQ=2)


                                       ccccccGCGGGGGCGTGGATCGAAACTATGCTGGC.TC.GA.C..CGAGTT.CACGGCGGGCT.AT.CGTCGCTCCCCCCGCGGGGGCGGGGGTCGAAAcggggcgaag                                                              >  1:1531939/1‑92 (MQ=2)


                                       ccccccGCGGGGGCGTGGATCGAAACACCCCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatga                                                               >  1:495962/1‑96 (MQ=2)


                                       ccccccGCGGGGGCGTGGATCGAAACACCAATGCCGAA.GC.CAAGGCCGC.AGCAGCG.GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaaaagc                                                                <  1:5570144/101‑7 (MQ=0)


                                       ccccccGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGCCTTGGACCGAAACATCCGCgg                                                               >  2:313427/1‑101 (MQ=255)


                                        cccccGCGGGGGCGTGGATCGAAACACCCCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatgat                                                              >  1:702922/1‑95 (MQ=2)


                                        cccccGCGGGGGCGTGGATCGAAACACCCCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatgat                                                              <  1:3565673/101‑7 (MQ=2)


                                         ccccGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGAt                                                             <  2:4136939/101‑1 (MQ=255)


                                          cccGCGGGGGCGTGGATCGAAACACCCCGAACCTG.TCGG..CGGC.G.AACACCGATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatgatca                                                            <  1:5667739/101‑9 (MQ=0)


                                          cccGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATc                                                            <  1:1205088/101‑1 (MQ=255)


                                             gcgGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGc                                                         <  1:1745408/101‑1 (MQ=255)


                                              cgGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCg                                                        <  1:1440409/101‑1 (MQ=255)


                                               gggggCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGt                                                       <  1:3144757/101‑1 (MQ=255)


                                               gggggCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGt                                                       >  2:5447002/1‑101 (MQ=255)


                                                ggggCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTg                                                      <  2:3821029/101‑1 (MQ=255)


                                                  ggCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAc                                                    >  1:2903989/1‑101 (MQ=255)


                                                   gCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcc                                                   <  2:3090147/101‑1 (MQ=255)


                                                    cGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAccc                                                  >  2:2660237/1‑101 (MQ=255)


                                                     gTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccg                                                 <  2:1398028/101‑1 (MQ=255)


                                                     gTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccg                                                 <  2:1714259/101‑1 (MQ=255)


                                                     gTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccg                                                 <  2:4953732/101‑1 (MQ=255)


                                                      tGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgc                                                >  2:3841246/1‑101 (MQ=255)


                                                      tGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgc                                                >  1:4624084/1‑101 (MQ=255)


                                                        gATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgccc                                              >  2:2158615/1‑101 (MQ=255)


                                                          tCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgccccg                                            >  1:303692/1‑101 (MQ=255)


                                                             aaaCAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgccccgccc                                         >  2:4104/1‑101 (MQ=255)


                                                             aaaCAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgccccgccc                                         >  1:371742/1‑101 (MQ=255)


                                                               acaccCCGATCAGG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCAt                                       <  1:2523282/101‑1 (MQ=255)


                                                               acaacCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgcccccccccc                                       >  1:4264022/1‑99 (MQ=255)


                                                                caacCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCacc                                      >  2:1497255/1‑99 (MQ=255)


                                                                 accccGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCg                                     <  1:2313890/99‑1 (MQ=255)


                                                                  acCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCgg                                    <  2:734497/101‑1 (MQ=255)


                                                                     cGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGGGACCCGCCCCGCCCATCGGGCg                                 >  2:2743840/1‑101 (MQ=255)


                                                                       aTCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCt                               <  2:3598319/101‑1 (MQ=255)


                                                                       aTCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCt                               >  2:2368872/1‑101 (MQ=255)


                                                                       aTCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCCCCCCTCGGTcccc                               >  1:1110946/1‑98 (MQ=255)


                                                                          aTG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTcct                            <  1:5195753/101‑2 (MQ=255)


                                                                          aTG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTccc                            >  1:4835748/1‑101 (MQ=255)


                                                                          aTG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTccc                            >  1:3611044/1‑101 (MQ=255)


                                                                          aTG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTccc                            <  1:2467645/101‑1 (MQ=255)


                                                                           tG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTcccc                           <  1:339128/101‑1 (MQ=255)


                                                                            g.gC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTccccc                          <  1:3841488/101‑1 (MQ=255)


                                                                            g.gC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCT.CCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTcccccc                         <  1:873876/101‑1 (MQ=255)


                                                                               gac..cGCCGC.AGCGCCGCGCT.GA.CGACGCACCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTcccccc                         <  1:2794470/99‑1 (MQ=255)


                                                                                  cactgcTC.ACCGCCGCGCG.AG.CGTGTCTCCACCCGCGGGGGCGTCGACCGAAACTTCCGCAGATTGGCTTTTCCCGCCCCGCCCATCGGCCGCTCCCCCcg                        <  2:1821172/96‑1 (MQ=255)


                                                                                    cGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCcgcg                      <  1:2144085/101‑1 (MQ=255)


                                                                                    cGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCcgcg                      >  2:1354361/1‑101 (MQ=255)


                                                                                       cTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCgggg                   >  2:2912373/1‑101 (MQ=255)


                                                                                       cTC.AGCGCCGCGCG.GA.CGTCGCCCCCCCCGCGGGGGGGTGGATCGAAACATCCGCGGATCGGCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCgggg                   <  1:5780207/101‑1 (MQ=38)


                                                                                        tC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCggggg                  >  2:5792056/1‑101 (MQ=255)


                                                                                         c.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGc                 >  1:2649485/1‑101 (MQ=255)


                                                                                           aGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCg                >  2:868676/1‑101 (MQ=255)


                                                                                                cgcgCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGAt           <  2:4420476/101‑1 (MQ=255)


                                                                                                cgcgCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGAt           <  1:3374959/101‑1 (MQ=255)


                                                                                                cgcgCG.GA.CTTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGCCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGAt           <  2:1970631/101‑1 (MQ=37)


                                                                                                  cgcT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCg         >  2:3166668/1‑101 (MQ=255)


                                                                                                   gcT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGa        >  2:4851840/1‑101 (MQ=255)


                                                                                                     cggA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa       <  2:367446/99‑1 (MQ=255)


                                                                                                       gA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc     <  2:3849954/101‑1 (MQ=255)


CCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GC.C..CGCCTC.AGCGCCGCGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTAC  >  NC_014034/1397467‑1397667

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG