BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1562015	243 (0.910)	147 (0.550)	65/184	9.7	0.55	intergenic (+209/+11)	RCAP_rcc01445/RCAP_rcc01446	tonB‑dependent receptor/M20 family peptidase
*	?	NC_014034	1608059 =	NA (NA)	147 (0.550)	65/184	9.7	0.55	intergenic (+329/‑18)	RCAP_rcc01484/murD	hypothetical protein/UDP‑N‑acetylmuramoylalanine‑‑D‑glutamate ligase
Rejected: Position hash score below cutoff.

Only 100 of 258 total aligned reads displayed.


GCCGGGGCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCTGTGGAT  >  NC_014034/1561915‑1562115


 ccGGGGCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAC..CCCccgcc                                                                                                     <  2:4340069/101‑1 (MQ=255)


  cGGGGCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCccgccg                                                                                                    >  1:552535/1‑101 (MQ=255)


    gggCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCccgccgcc                                                                                                  >  2:1664802/1‑101 (MQ=255)


      gCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCcgccgccgc                                                                                                >  1:1365698/1‑101 (MQ=255)


        aaaGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGccc                                                                                              >  2:3479756/1‑101 (MQ=255)


         aaGGGCAGGAAAAGGGGCCCCCGATCCGAGCGCCTTTTGCTTTTATCTTGCCTCAAATACCCCAGGGGGGTGGGGGGGTGTGAAC..CCCCCGCCGCCGCCCg                                                                                             <  2:3372579/101‑1 (MQ=37)


          aGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCgg                                                                                            >  1:5476458/1‑101 (MQ=255)


           gggCAGGGAAAGGTCCGCTCGATCCGGGCGCTTTTTGGTTTTATCTTGCCTCAAATTTCCCACGGGGGGGCGGGGGTGTGAAC..CCCCCGCCGCCGCCCGGt                                                                                           <  2:3858325/101‑1 (MQ=25)


               aGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGc                                                                                       >  1:2354022/1‑101 (MQ=255)


                ggaaaagGGGCCCCGGACCCGCGCCCCTTTTTTTTTTATCTTCCCTAAAATACCCCGGGGGGGGGGGGGGGTGTAAAC..CCCCCGCCGCCGCCCGGTCAGcc                                                                                      <  2:3190567/98‑1 (MQ=255)


                   aaaaGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCcgc                                                                                   >  1:4313557/1‑101 (MQ=255)


                   aaaaGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCcgc                                                                                   >  2:1547669/1‑101 (MQ=255)


                   aaaaGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCcgc                                                                                   >  1:1024805/1‑101 (MQ=255)


                      aGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGAt                                                                                >  2:4873145/1‑101 (MQ=255)


                          cgcCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCgg                                                                            >  1:4019831/1‑101 (MQ=255)


                           gcCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGCCAGCCCGCGATGCGGt                                                                           >  2:815073/1‑101 (MQ=255)


                                aTCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGa                                                                      >  2:5788722/1‑101 (MQ=255)


                                aTCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA...CCCCGCCGCCCCCCGGGCAGCCCGCGATGCGGGCCAGaa                                                                     >  2:4429662/1‑101 (MQ=37)


                                 tCCGAGCGCCTTTTGTTTTTCTCTGGCCTAAAATTCCCCAGGGGGGTGGGGGGGGATAAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGaa                                                                     <  2:1891271/101‑1 (MQ=255)


                                 tCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGaa                                                                     >  2:3787830/1‑101 (MQ=255)


                                  ccggccccccTTTCCTTTTATCTTGCCTAAAATTCCCCGGGGGGGTGCGGGGGTGTAAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAAt                                                                    <  2:5674307/94‑1 (MQ=255)


                                  ccGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAAt                                                                    >  2:1101653/1‑101 (MQ=255)


                                   cGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATc                                                                   >  2:473268/1‑101 (MQ=255)


                                    gAGCGCCTTTTTTTTTTATCTTGCCTCAAATACCCCGGGGGGGGGGGGGGGTGTAAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATcc                                                                  <  1:4402670/101‑1 (MQ=25)


                                    gAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATcc                                                                  >  1:3507798/1‑101 (MQ=255)


                                     aGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCcg                                                                 >  2:1519200/1‑101 (MQ=255)


                                     aGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCcg                                                                 >  1:1900209/1‑101 (MQ=255)


                                      gcgcCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCcgc                                                                >  1:2141784/1‑101 (MQ=255)


                                        gcCTTTTGTTTTTATCTTGCCTCAAATACCCCAGGGGGGTGCGGGGGTGTGAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCgcgc                                                              <  2:3911784/101‑1 (MQ=38)


                                         cccTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGcc                                                             >  1:3819567/1‑101 (MQ=255)


                                         cccTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGcc                                                             >  2:895241/1‑101 (MQ=255)


                                          ccTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGccc                                                            >  1:3970759/1‑101 (MQ=255)


                                          ccTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGccc                                                            >  2:5333931/1‑101 (MQ=255)


                                            tttGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAg                                                          >  2:5591388/1‑101 (MQ=255)


                                              ttcTTTTATCTTGCCTAAAATACCCCGGGGGGGGGGGGGGGTGTAAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCt                                                        <  2:3165999/99‑1 (MQ=255)


                                              tGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCt                                                        >  1:5661802/1‑101 (MQ=255)


                                              tGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCt                                                        >  2:2607734/1‑101 (MQ=255)


                                              tGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCt                                                        >  1:1931223/1‑101 (MQ=255)


                                              tGCTTTTATCTTGCCTAAAATACCCCACGGGGGGGGGGGGGTGTAAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCt                                                        <  2:5141677/101‑1 (MQ=255)


                                               ttttttATCTTCCCCCAAATACCCCGGGGGGGGGGGGGGGTGAAACC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTg                                                       <  1:2494769/99‑1 (MQ=255)


                                               gtttttATCTTTCCTAAAATATCCCGCGGGGGTGCGGGGGTGTGAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTg                                                       <  2:417831/99‑1 (MQ=38)


                                               gCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTg                                                       >  2:4763955/1‑101 (MQ=255)


                                                 ttttATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCg                                                     >  1:2615505/1‑101 (MQ=255)


                                                 ttttATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCg                                                     >  2:1836775/1‑101 (MQ=255)


                                                 ttttATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCg                                                     >  2:93164/1‑101 (MQ=255)


                                                  tttATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCgg                                                    >  1:2285743/1‑101 (MQ=255)


                                                  tttATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCgg                                                    >  1:2460681/1‑101 (MQ=255)


                                                  tttATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCgg                                                    >  1:2581686/1‑101 (MQ=255)


                                                   ttATCTGCCCTAAAATACCCCGGGGGGGTGCGGGGGTGTGAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGa                                                   <  1:1458471/101‑1 (MQ=38)


                                                    tATCTTGCCTCAGATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGAt                                                  >  1:3138453/1‑101 (MQ=255)


                                                    tATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGAt                                                  >  2:3037147/1‑101 (MQ=255)


                                                     aTCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATg                                                 >  2:5398600/1‑101 (MQ=255)


                                                       cTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGcc                                               >  2:4586060/1‑101 (MQ=255)


                                                        ttGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGccc                                              >  1:4925231/1‑101 (MQ=255)


                                                         tcccacAAATACCCCGGGGGGGGGCGGGGGTGAAAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCt                                             <  1:3788072/96‑1 (MQ=255)


                                                          gCCTAAAATCCCCCGGGGGGGGGGGGGGGTGTGAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCtt                                            <  2:3022869/101‑1 (MQ=255)


                                                           ccccAAAAATCCCCCGGGGGGGGGGGGGGTTGAAACCCCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCt                                             <  1:3648224/98‑1 (MQ=255)


                                                           ccTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTtg                                           >  1:3403267/1‑101 (MQ=255)


                                                           ccTCAAATATCCCACGGGGGTGCGGGGGTGCGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTtg                                           >  2:205573/1‑101 (MQ=255)


                                                            ctaagttcccccGCGGGGGGGGGGGGTTGAGACC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTtgt                                          <  1:3512228/92‑1 (MQ=255)


                                                              cAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTgg                                        >  1:2949275/1‑101 (MQ=255)


                                                               aaaTATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGa                                       >  1:4831852/1‑101 (MQ=255)


                                                                aaTACCCCCGGGGGGGGGGGGGGTGTGAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGaa                                      <  1:693147/101‑1 (MQ=255)


                                                                 atatCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAg                                     >  1:3384525/1‑101 (MQ=255)


                                                                 aaatCCCCCGGGGGGGGGGGGGGTGGAAACCCCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGa                                       <  2:5661507/99‑1 (MQ=255)


                                                                  aatCCCCCGGGGGGGGGGGGGGGTGAAAACCCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGaa                                      <  1:658151/100‑1 (MQ=255)


                                                                   atCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGct                                   >  1:4683041/1‑101 (MQ=255)


                                                                   atCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGct                                   >  2:4052869/1‑101 (MQ=255)


                                                                    tCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGTCCTTGTGGAAGctc                                  >  2:5466743/1‑101 (MQ=255)


                                                                    ccccCCGGGGGGGGGGGGGTGTAAAC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGctc                                  <  2:763365/100‑1 (MQ=255)


                                                                     cccACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGctct                                 >  2:675967/1‑101 (MQ=255)


                                                                        gaggaggcgggggggtgATAAA..CCCCCGCCGGCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCaa                              <  1:1874149/91‑1 (MQ=255)


                                                                        aCGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCaa                              >  2:4521544/1‑101 (MQ=255)


                                                                          gggggtgcgggggtgTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAgg                            >  2:2881710/1‑101 (MQ=255)


                                                                          gggggtgcgggggtgTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAgg                            >  1:5209842/1‑101 (MQ=255)


                                                                           ggggggggggggtgTGACC..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGt                           <  1:3162306/101‑1 (MQ=255)


                                                                                gcgggggtgTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCatat                      >  2:1570901/1‑101 (MQ=255)


                                                                                 cgggggtgTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATAtt                     >  1:1614333/1‑101 (MQ=255)


                                                                                  gggggtgTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATAttt                    >  2:2649384/1‑101 (MQ=255)


                                                                                       tcgcccccccccccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTtctc                 <  1:98613/92‑1 (MQ=255)


                                                                                       ggtgaaacccccccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTtctc                 <  1:5652925/92‑1 (MQ=255)


                                                                                        gtgaaacccccccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCg                <  1:4529055/93‑1 (MQ=255)


                                                                                        gcaaaa..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGtt              <  2:1750446/98‑1 (MQ=255)


                                                                                         ggtacccccccgGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGt               <  1:4572637/94‑1 (MQ=255)


                                                                                            gacccccccGCCGCCGCACGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCg            <  2:5199052/97‑1 (MQ=255)


                                                                                            cccccccccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCg            <  1:87310/97‑1 (MQ=255)


                                                                                            aaaccccccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCg            <  2:2413533/97‑1 (MQ=255)


                                                                                             ccccccgcGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCgg           <  2:1025362/98‑1 (MQ=255)


                                                                                             acgccccgGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCgg           <  1:922923/98‑1 (MQ=255)


                                                                                             acccccccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCgg           <  1:107140/98‑1 (MQ=255)


                                                                                               ccccccTCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGc         <  1:2170014/100‑1 (MQ=255)


                                                                                               ccccccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGc         <  2:3426847/100‑1 (MQ=255)


                                                                                                gcccgaccgccgccCGGTCAGCCCGCGTTGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCt        <  2:1269558/95‑1 (MQ=255)


                                                                                                cccccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCt        <  2:3652375/101‑1 (MQ=255)


                                                                                                 ccccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtg       <  1:1761949/101‑1 (MQ=255)


                                                                                                 ccccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCACTCAAGGTCATATTTCTCGTTCGGGCtg       >  2:5530822/1‑101 (MQ=255)


                                                                                                  cccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtgt      <  2:2353888/101‑1 (MQ=255)


                                                                                                  cccGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtgt      >  1:2392332/1‑101 (MQ=255)


                                                                                                   ccgccgccgCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCtgtg     <  2:3632797/101‑1 (MQ=255)


                                                                                                     cccgccgccCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCTGTGGa   <  2:2141662/100‑1 (MQ=255)


GCCGGGGCAAAGGGCAGGGAAAAGGGCGCCCGATCCGAGCGCCCTTTGCTTTTATCTTGCCTCAAATATCCCACGGGGGTGCGGGGGTGTGAAA..CCCCCGCCGCCGCCCGGTCAGCCCGCGATGCGGTCCAGAATCCGCGCCCAGCTGCGGATGCCCTTGTGGAAGCTCTCAAGGTCATATTTCTCGTTCGGGCTGTGGAT  >  NC_014034/1561915‑1562115

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 27 ≤


ATCG

< 34 ≤


ATCG

< 41 ≤


ATCG