New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 392448 =73 (0.260)26 (0.090) 13/190 32.4 0.29 intergenic (‑96/+47) RCAP_rcc00363/trmD hypothetical protein/tRNA (guanine‑N1)‑methyltransferase
?NC_014034 2330184 = 54 (0.190)intergenic (+159/+153) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

GCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCTCCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTC  >  NC_014034/392348‑392548
                                                                                                       |                                                                                                        
gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.cc                                                                                                          >  2:5471680/1‑101 (MQ=255)
gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.cc                                                                                                          <  1:3649536/101‑1 (MQ=255)
gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.cc                                                                                                          <  1:2804674/101‑1 (MQ=255)
gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.cc                                                                                                          <  2:4186277/101‑1 (MQ=255)
gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CACGGGGGT.cc                                                                                                          >  1:1821549/1‑101 (MQ=255)
 ccATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCg                                                                                                         <  1:1774995/101‑1 (MQ=255)
 ccATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCg                                                                                                         <  1:2499011/101‑1 (MQ=255)
  cATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCgg                                                                                                        >  1:2354610/1‑101 (MQ=255)
   aTCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCCAATAT.CCCGGGGGT.CCggg                                                                                                       >  2:1692795/1‑101 (MQ=255)
   aTCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggg                                                                                                       >  2:2683259/1‑101 (MQ=255)
   aTCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggg                                                                                                       >  2:800056/1‑101 (MQ=255)
    tCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGTCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCgggg                                                                                                      <  2:2643057/101‑1 (MQ=255)
    tCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCgggg                                                                                                      <  1:4520466/101‑1 (MQ=255)
    tCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCgggg                                                                                                      <  1:3805004/101‑1 (MQ=255)
     cGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggggg                                                                                                     >  1:5265597/1‑101 (MQ=255)
     cGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggggg                                                                                                     >  1:3762444/1‑101 (MQ=255)
     cGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggggg                                                                                                     <  2:263106/101‑1 (MQ=255)
     cGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggggg                                                                                                     <  1:2203561/101‑1 (MQ=255)
     cGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggggg                                                                                                     <  2:2970333/101‑1 (MQ=255)
     cGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggggg                                                                                                     <  1:146287/101‑1 (MQ=255)
      ggAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGc                                                                                                    >  2:4814178/1‑101 (MQ=255)
      ggAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGc                                                                                                    <  2:2410154/101‑1 (MQ=255)
      ggAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGc                                                                                                    <  2:3630287/101‑1 (MQ=255)
      ggAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGc                                                                                                    >  1:2043556/1‑101 (MQ=255)
      ggAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGc                                                                                                    >  1:4875418/1‑101 (MQ=255)
       gAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCg                                                                                                   <  2:1552136/101‑1 (MQ=255)
       gAAAGCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCg                                                                                                   <  1:2217126/101‑1 (MQ=255)
        aaaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCgg                                                                                                  >  2:4498495/1‑101 (MQ=255)
        aaaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCgg                                                                                                  <  1:176158/101‑1 (MQ=255)
        aaaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCgg                                                                                                  >  2:2657440/1‑101 (MQ=255)
         aaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.a                                                                                                <  2:2854943/101‑1 (MQ=255)
         aaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.a                                                                                                <  1:143181/101‑1 (MQ=255)
         aaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.a                                                                                                <  2:4023294/101‑1 (MQ=255)
         aaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.a                                                                                                >  2:5469841/1‑101 (MQ=255)
         aaTCCCCCCTTGTCCCCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGTGGGG.a                                                                                                <  2:1159986/101‑1 (MQ=38)
          aTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.Ag                                                                                               >  2:4734519/1‑101 (MQ=255)
          aTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.Ag                                                                                               >  1:5452668/1‑101 (MQ=255)
          aTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.Ag                                                                                               <  1:5299676/101‑1 (MQ=255)
          aTCCCTCCTTGTACCCGCTCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCTGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.Ag                                                                                               <  2:5485312/101‑1 (MQ=37)
           tCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCgccgc                                                                                               >  1:157228/1‑97 (MQ=255)
           tCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGc                                                                                              <  2:4270523/101‑1 (MQ=255)
           tCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGc                                                                                              <  1:2815680/101‑1 (MQ=255)
           tCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGc                                                                                              >  1:2126576/1‑101 (MQ=255)
            cccTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGcc                                                                                             <  1:718262/101‑1 (MQ=255)
            cccTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGcc                                                                                             <  2:5239030/101‑1 (MQ=255)
             cctcctTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGccc                                                                                            <  2:4766440/101‑1 (MQ=255)
             cctcctTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGccc                                                                                            <  2:2432464/101‑1 (MQ=255)
              ctcctTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGcccc                                                                                           <  2:4946857/101‑1 (MQ=255)
                cctTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCc...g                                                                                      >  2:5274132/1‑101 (MQ=255)
                   tGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCc...ggcg                                                                                   >  2:4976437/1‑101 (MQ=255)
                     tCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCggg                                                                                 >  2:2448320/1‑101 (MQ=255)
                      cACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCNGNGGGT.CCGGGNGNGG.AGCCCNC...GGCgggg                                                                                >  1:2436422/1‑100 (MQ=255)
                      cACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCgggg                                                                                >  2:3307729/1‑100 (MQ=255)
                         cgcgCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCggggggg                                                                             >  1:5702437/1‑97 (MQ=255)
                          gcgcAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCgggggggg                                                                            >  1:1769542/1‑96 (MQ=255)
                          gcgcAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCgggggggc                                                                            >  2:5640987/1‑96 (MQ=255)
                           cgcAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCgggggggcc                                                                           >  2:3972679/1‑95 (MQ=255)
                             cAAGACTGTGC.GCCAAAAGCGGGGAGACAAGGGGCGGCCA.TTTCCTTCTGCC.CAAAAATCCCCGGGGGG.CCGGGGGGGGAACCCCCC...GGCGGGTCGCCTCg                                                                         <  2:1942134/101‑1 (MQ=255)
                             cAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCggggggggcgg                                                                         >  2:818768/1‑93 (MQ=255)
                              aaGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCgggggggcgcgg                                                                        >  1:3546791/1‑92 (MQ=255)
                              aaGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCCGGGGT.CCGGGGGCGG.AGCCCCC...GGCggggggcggcgg                                                                        >  2:2289709/1‑92 (MQ=25)
                                  cTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGAGCGCCCCGgcggg                                                                    >  2:1573130/1‑99 (MQ=255)
                                    aTGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCTCgcggctgg                                                                  >  2:3212707/1‑94 (MQ=21)
                                           ccAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGCGGCGCGGCGCGGCCGCGGCg                                                           >  2:588859/1‑101 (MQ=21)
                                             aaaCCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCGCCGGCGCGGCCCCGGCggg                                                         >  2:2359820/1‑99 (MQ=18)
                                             aaaCCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGCGGCCCGGCGGAGGCGactcgcg                                                         >  2:853390/1‑95 (MQ=18)
                                              aacggggagaaCAAT.GCAGGCCATTTTCATC.TGCCCCAAATTC.CCCGGGGGTCCCGGGGGGGG.ACCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGaaa                                                        <  2:761948/91‑1 (MQ=12)
                                               aCCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCGCCGGCGCCGCCGGgggggcaa                                                       >  1:1167960/1‑95 (MQ=18)
                                                    cgatctaagggCAGGCCT.TTTCTTCTTCCCTAAAATAC.CCGGGGGGC.CGGGGGGCGG.ACCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACtt                                                  <  2:1825940/92‑1 (MQ=18)
                                                      ggACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCCCGGCGCCGCCGGGGCGgaagaacgtgc                                                >  2:5686113/1‑93 (MQ=18)
                                                          aagggCAGGCCA.TTTCATCTTCCCTCAAATCT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGaa                                            <  2:3762201/98‑1 (MQ=255)
                                                               cAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGCGGCCCCGGGCCGCCGCGGCGGAAAAACCTGCCGaaactct                                       >  1:2426359/1‑96 (MQ=9)
                                                                aGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGGCCCGGCGGCGCCGGGGCGGGAACAAATTCCGCACTtctc                                      >  1:2663668/1‑101 (MQ=9)
                                                                aGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGGCCCGGCGCCGCCGGGGGGGGAAAACTTGCCGGACTtctc                                      >  1:2487933/1‑101 (MQ=14)
                                                                     a.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCCCCGCGCCGCCGCGGCGGAAAAACCTGCCCCACATCTcccccc                                 >  1:3353107/1‑98 (MQ=9)
                                                                       tttCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCCCCGGGCGGGCGGGGCGGGAAAACTTCCCGCACTTCTccctcca                                >  2:4201430/1‑97 (MQ=2)
                                                                       tttCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCCCCGCGCGGCCCGGGCGGAAACACTTGCCGAGAATCTcccccca                                >  2:510446/1‑97 (MQ=9)
                                                                         tCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCGCCGCGCCGGCCCGGGGCAATAACATGCCGAACTCCTCCcccacac                              >  2:63676/1‑98 (MQ=9)
                                                                          cATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGGCTCGGCGCCGCCGGGGCGGAAACACTTTCCCGACTTCTCCCCCCAATc                             >  2:855877/1‑101 (MQ=17)
                                                                           ttCTCGCCACAAAGAG.CCGGGGGGG.GGGGGGGGGG.GGCCCCCGCGGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCTCCCACaaa                               <  1:1475288/100‑1 (MQ=16)
                                                                            ttttGCCCTAAATTC.CCCGGGGGG.CCGGGGGGGGCACCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCTCCCACAAATcc                            <  1:1820429/99‑1 (MQ=21)
                                                                                          cccgggggggC.CGGGGGGCGG.ACCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCTCCCACAAATCCGGCCGCCGGTCCcg              <  2:5702142/96‑1 (MQ=37)
                                                                                               gggggT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCTCCGCGCCGCCGCGGCGGAAACACCTTCCCAACTTCTCCCCCCAAACCAGCCCCCCGGccccccccc         >  2:5627465/1‑95 (MQ=9)
                                                                                               gggggT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCCCGGGGGCGCCCCGGCGCAAACACTTTCCCGACCTTTCCCCCCAACCCCGCCGCCGGCGCcgccccc         >  2:5589840/1‑97 (MQ=2)
                                                                                                   gT.CCGGGGGCGG.AGCCCCC...GGCGGGGCGGCTCGGGGCCGCCGCGGCGAAAACACTTGCCGCACTTCTCCCCCCAACCCGGCCGCCCGGCCCGCGGCCAAGc     >  2:3571380/1‑101 (MQ=16)
                                                                                                   gT.CCGGGGGCGG.AGCCCCC...GGCGGGGCGCCCCGGCGCCGCCGCGGCGGAAACACCTTCCGCACCTCTCCCCCAAAACCCGCCGCCCGCccccccgcaaacc     >  2:3353040/1‑91 (MQ=9)
                                                                                                      ccGGGGGCGG.AGCCCCC...GGCGGGGGGGCCCCGCGCCGCCGCGGGGAAAACACTTGCCGAACTTCTCCCACCAATCCCGCCGCCCGGCCcgccgccaaacct   >  2:3111530/1‑91 (MQ=255)
                                                                                                       cGGGGGCGG.AGCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCTCCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTc  <  2:4129126/101‑1 (MQ=255)
                                                                                                       cGGGGGCGG.AGCCCCC...GGCGGGGCGCCTCGGCGCGGCCCGGGGGGAAAAACTTTCCCGAATTCTCCCACAAAACCCGCCCCCCGGCCcccgcccaaacatc  >  1:5158449/1‑91 (MQ=9)
                                                                                                       |                                                                                                        
GCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCTCCCACAAATCCGGCCGCCGGTCCCGCGTCAAAGCTTC  >  NC_014034/392348‑392548

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG