New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 392436 =76 (0.300)44 (0.170) 25/174 23.1 0.44 intergenic (‑84/+59) RCAP_rcc00363/trmD hypothetical protein/tRNA (guanine‑N1)‑methyltransferase
?NC_014034 = 2330277 38 (0.130)intergenic (+252/+60) RCAP_rcc02161/mrcA hypothetical protein/penicillin‑binding protein 1A
Rejected: Position hash score below cutoff.

Only 100 of 114 total aligned reads displayed.

GATCCGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCTCCCACAAATCC  >  NC_014034/392336‑392522
                                                                                                     |                                                                                            
gATCCGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAata                                                                                              <  1:3220251/101‑1 (MQ=255)
gATCCGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAata                                                                                              <  2:2529745/101‑1 (MQ=255)
gATCCGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAata                                                                                              >  1:2261429/1‑101 (MQ=255)
 aTCCGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAatat                                                                                             <  1:978336/101‑1 (MQ=255)
  tCCGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.c                                                                                           <  2:5483473/101‑1 (MQ=255)
  tCCGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.c                                                                                           <  1:4428011/101‑1 (MQ=255)
  tCCGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.c                                                                                           <  1:5597540/101‑1 (MQ=255)
   ccGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.cc                                                                                          <  2:4249150/101‑1 (MQ=255)
   ccGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.cc                                                                                          <  1:4333741/101‑1 (MQ=255)
   ccGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.cc                                                                                          <  1:4417240/101‑1 (MQ=255)
   ccGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.cc                                                                                          <  1:4850659/101‑1 (MQ=255)
   ccGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGACCCAAACCGCAGGGACAATGGCAGGCCA.TTTCATCATGCCTCAAATAT.cc                                                                                          >  1:5752971/1‑101 (MQ=255)
    cGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.ccc                                                                                         <  1:3715053/101‑1 (MQ=255)
    cGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.ccc                                                                                         <  2:4152969/101‑1 (MQ=255)
    cGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.ccc                                                                                         >  1:4198381/1‑101 (MQ=255)
    cGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.ccc                                                                                         <  2:3871071/101‑1 (MQ=255)
    cGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.ccc                                                                                         <  2:1378501/101‑1 (MQ=255)
     ggggACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCg                                                                                        >  1:5493911/1‑101 (MQ=255)
     ggggACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCg                                                                                        >  1:3834180/1‑101 (MQ=255)
      gggACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCgg                                                                                       <  1:3081077/101‑1 (MQ=255)
      gggACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCgg                                                                                       <  2:2596752/101‑1 (MQ=255)
      gggACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCgg                                                                                       <  1:179960/101‑1 (MQ=255)
         aCGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCggggg                                                                                    <  1:1482636/101‑1 (MQ=255)
          cGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCgggggg                                                                                   >  1:4283941/1‑100 (MQ=255)
           ggCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.c                                                                                 <  1:1700827/101‑1 (MQ=255)
           ggCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.c                                                                                 <  1:3199948/101‑1 (MQ=255)
           ggCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.c                                                                                 <  1:1173460/101‑1 (MQ=255)
            gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGtac                                                                                 <  1:2804673/101‑3 (MQ=255)
            gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.cc                                                                                <  2:4186277/101‑1 (MQ=255)
            gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.cc                                                                                <  1:3649536/101‑1 (MQ=255)
            gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.cc                                                                                >  2:5471680/1‑101 (MQ=255)
            gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.cc                                                                                <  1:2804674/101‑1 (MQ=255)
            gCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CACGGGGGT.cc                                                                                >  1:1821549/1‑101 (MQ=255)
             ccATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCg                                                                               <  1:1774995/101‑1 (MQ=255)
             ccATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCg                                                                               <  1:2499011/101‑1 (MQ=255)
              cATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCgagatcggaa                                                                               >  1:3423351/1‑92 (MQ=255)
              cATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCgg                                                                              >  1:2354610/1‑101 (MQ=255)
               aTCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCCAATAT.CCCGGGGGT.CCggg                                                                             >  2:1692795/1‑101 (MQ=255)
               aTCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggg                                                                             >  2:2683259/1‑101 (MQ=255)
               aTCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggg                                                                             >  2:800056/1‑101 (MQ=255)
                tCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGTCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCgggg                                                                            <  2:2643057/101‑1 (MQ=255)
                tCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCgggg                                                                            <  1:3805004/101‑1 (MQ=255)
                tCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCgggg                                                                            <  1:4520466/101‑1 (MQ=255)
                 cGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggggg                                                                           <  2:2970333/101‑1 (MQ=255)
                 cGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggggg                                                                           <  1:146287/101‑1 (MQ=255)
                 cGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggggg                                                                           >  1:5265597/1‑101 (MQ=255)
                 cGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCggggg                                                                           >  1:3762444/1‑101 (MQ=255)
                  ggAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGc                                                                          >  2:4814178/1‑101 (MQ=255)
                  ggAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGc                                                                          <  2:2410154/101‑1 (MQ=255)
                  ggAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGc                                                                          >  1:2043556/1‑101 (MQ=255)
                  ggAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGc                                                                          <  2:3630287/101‑1 (MQ=255)
                   gAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCg                                                                         <  2:1552136/101‑1 (MQ=255)
                   gAAAGCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCg                                                                         <  1:2217126/101‑1 (MQ=255)
                    aaaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCgg                                                                        >  2:2657440/1‑101 (MQ=255)
                    aaaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCgg                                                                        >  2:4498495/1‑101 (MQ=255)
                     aaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.a                                                                      >  2:5469841/1‑101 (MQ=255)
                     aaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.a                                                                      <  2:2854943/101‑1 (MQ=255)
                     aaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.a                                                                      <  2:4023294/101‑1 (MQ=255)
                     aaTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.a                                                                      <  1:143181/101‑1 (MQ=255)
                     aaTCCCCCCTTGTCCCCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGTGGGG.a                                                                      <  2:1159986/101‑1 (MQ=38)
                      aTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.Ag                                                                     >  1:5452668/1‑101 (MQ=255)
                      aTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.Ag                                                                     <  1:5299676/101‑1 (MQ=255)
                      aTCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.Ag                                                                     >  2:4734519/1‑101 (MQ=255)
                      aTCCCTCCTTGTACCCGCTCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCTGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.Ag                                                                     <  2:5485312/101‑1 (MQ=37)
                       tCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCgccgc                                                                     >  1:157228/1‑97 (MQ=255)
                       tCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGc                                                                    <  1:2815680/101‑1 (MQ=255)
                       tCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGc                                                                    <  2:4270523/101‑1 (MQ=255)
                       tCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGc                                                                    >  1:2126576/1‑101 (MQ=255)
                        cccTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGcc                                                                   <  2:5239030/101‑1 (MQ=255)
                         cctcctTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGccc                                                                  <  2:2432464/101‑1 (MQ=255)
                         cctcctTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGccc                                                                  <  2:4766440/101‑1 (MQ=255)
                          ctcctTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGcccc                                                                 <  2:4946857/101‑1 (MQ=255)
                            cctTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCc...g                                                            >  2:5274132/1‑101 (MQ=255)
                                 tCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCggg                                                       >  2:2448320/1‑101 (MQ=255)
                                  cACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCNGNGGGT.CCGGGNGNGG.AGCCCNC...GGCgggg                                                      >  1:2436422/1‑100 (MQ=255)
                                  cACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCgggg                                                      >  2:3307729/1‑100 (MQ=255)
                                     cgcgCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCggggggg                                                   >  1:5702437/1‑97 (MQ=255)
                                      gcgcAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCgggggggg                                                  >  1:1769542/1‑96 (MQ=255)
                                       cgcAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCgggggggcc                                                 >  2:3972679/1‑95 (MQ=255)
                                         cAAGACTGTGC.GCCAAAAGCGGGGAGACAAGGGGCGGCCA.TTTCCTTCTGCC.CAAAAATCCCCGGGGGG.CCGGGGGGGGAACCCCCC...GGCGGGTCGCCTCg                                               <  2:1942134/101‑1 (MQ=255)
                                         cAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCggggggggcgg                                               >  2:818768/1‑93 (MQ=255)
                                          aaGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCgggggggcgcgg                                              >  1:3546791/1‑92 (MQ=255)
                                          aaGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCCGGGGT.CCGGGGGCGG.AGCCCCC...GGCggggggcggcgg                                              >  2:2289709/1‑92 (MQ=25)
                                              cTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGAGCGCCCCGgcggg                                          >  2:1573130/1‑99 (MQ=255)
                                                aTGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCTCgcggctgg                                        >  2:3212707/1‑94 (MQ=21)
                                                       ccAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGCGGCGCGGCGCGGCCGCGGCg                                 >  2:588859/1‑101 (MQ=21)
                                                         aaaCCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCGCCGGCGCGGCCCCGGCggg                               >  2:2359820/1‑99 (MQ=18)
                                                         aaaCCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGCGGCCCGGCGGAGGCGactcgcg                               >  2:853390/1‑95 (MQ=18)
                                                          aacggggagaaCAAT.GCAGGCCATTTTCATC.TGCCCCAAATTC.CCCGGGGGTCCCGGGGGGGG.ACCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGaaa                              <  2:761948/91‑1 (MQ=12)
                                                           aCCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCGCCGGCGCCGCCGGgggggcaa                             >  1:1167960/1‑95 (MQ=18)
                                                                cgatctaagggCAGGCCT.TTTCTTCTTCCCTAAAATAC.CCGGGGGGC.CGGGGGGCGG.ACCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACtt                        <  2:1825940/92‑1 (MQ=18)
                                                                  ggACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCCCGGCGCCGCCGGGGCGgaagaacgtgc                      >  2:5686113/1‑93 (MQ=18)
                                                                      aagggCAGGCCA.TTTCATCTTCCCTCAAATCT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGaa                  <  2:3762201/98‑1 (MQ=255)
                                                                           cAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGCGGCCCCGGGCCGCCGCGGCGGAAAAACCTGCCGaaactct             >  1:2426359/1‑96 (MQ=9)
                                                                            aGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGGCCCGGCGGCGCCGGGGCGGGAACAAATTCCGCACTtctc            >  1:2663668/1‑101 (MQ=9)
                                                                            aGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGGCCCGGCGCCGCCGGGGGGGGAAAACTTGCCGGACTtctc            >  1:2487933/1‑101 (MQ=14)
                                                                                   tttCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCCCCGCGCGGCCCGGGCGGAAACACTTGCCGAGAATCTcccccca      >  2:510446/1‑97 (MQ=9)
                                                                                     tCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGGGGCCGCCGCGCCGGCCCGGGGCAATAACATGCCGAACTCCTCCcccacac    >  2:63676/1‑98 (MQ=9)
                                                                                       ttCTCGCCACAAAGAG.CCGGGGGGG.GGGGGGGGGG.GGCCCCCGCGGGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCTCCCACaaa     <  1:1475288/100‑1 (MQ=16)
                                                                                        ttttGCCCTAAATTC.CCCGGGGGG.CCGGGGGGGGCACCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCTCCCACAAATcc  <  1:1820429/99‑1 (MQ=21)
                                                                                                     |                                                                                            
GATCCGGGGACGGCCATCGGAAATCCCTCCTTGTCACCGCGCAAGACTATGCGGCCCAAACCGGAGGGACAATGGCAGGCCA.TTTCATCTTGCCTCAAATAT.CCCGGGGGT.CCGGGGGCGG.AGCCCCC...GGCGGGTCGCCTCGGCGCAGCCGAGGCGAAATCACTTGCCGAACTTCTCCCACAAATCC  >  NC_014034/392336‑392522

Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG