New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1253880NA (NA)33 (0.130) 7/176 35.6 0.33 intergenic (+38/+53) RCAP_rcc01181/hisH hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
?NC_014034 = 2577184 135 (0.460)intergenic (+106/‑323) fdx/purU ferredoxin VI/formyltetrahydrofolate deformylase
Rejected: Position hash score below cutoff.

CCCGCCGCGATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGAG....C....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAAT  >  NC_014034/1253780‑1253955
                                                                                                    |                                                                                        
cccGCCGCGATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCt                                                                                          <  1:5567319/101‑1 (MQ=255)
 ccgccgCGATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTc                                                                                         <  2:2105893/101‑1 (MQ=255)
   gccgcGATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCgg                                                                                       >  2:5010840/1‑101 (MQ=255)
   gccgcGATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCgg                                                                                       >  1:870175/1‑101 (MQ=255)
    ccgcGATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCggg                                                                                      <  1:5268876/101‑1 (MQ=255)
    ccgcGATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCggg                                                                                      <  2:1694627/101‑1 (MQ=255)
     cgcgATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCgggg                                                                                     >  2:2368936/1‑101 (MQ=255)
      gcgATGGTGGTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCggggg                                                                                    <  1:688998/101‑1 (MQ=255)
      gcgATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAATCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCggggg                                                                                    <  2:2948387/101‑1 (MQ=255)
      gcgATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCggggg                                                                                    <  1:3654027/101‑1 (MQ=255)
      gcgATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCggggg                                                                                    >  1:2406492/1‑101 (MQ=255)
       cgATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTCAATACCTCCGGGGt                                                                                   >  1:3431233/1‑101 (MQ=255)
       cgATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGt                                                                                   >  1:2588373/1‑101 (MQ=255)
       cgATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGt                                                                                   <  2:4614554/101‑1 (MQ=255)
       cgATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGt                                                                                   <  2:5502754/101‑1 (MQ=255)
       cgATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGt                                                                                   <  2:5605460/101‑1 (MQ=255)
        gATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCggggggg                                                                                  >  1:3954344/1‑99 (MQ=255)
        gATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTg                                                                                  >  2:458568/1‑101 (MQ=255)
        gATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTg                                                                                  <  2:990893/101‑1 (MQ=255)
         aTGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGc                                                                                 <  2:1245846/101‑1 (MQ=255)
         aTGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGc                                                                                 <  2:3189908/101‑1 (MQ=255)
         aTGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGc                                                                                 >  1:4264433/1‑101 (MQ=255)
          tGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCg                                                                                >  2:3963063/1‑101 (MQ=255)
          tGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCg                                                                                <  2:5073744/101‑1 (MQ=255)
           ggTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCg.....g                                                                          <  2:4455133/101‑1 (MQ=255)
           ggTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGGGCg.....g                                                                          >  2:3721258/1‑101 (MQ=255)
            gTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGACCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCg.....gg                                                                         <  2:4129617/101‑1 (MQ=255)
             tGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCg.....ggg                                                                        <  1:3721486/101‑2 (MQ=255)
              gCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCg.....gggg                                                                       <  1:1648087/101‑3 (MQ=255)
              gCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCg.....gggg                                                                       >  2:3610669/1‑99 (MQ=255)
               cTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTACATACCTCGGGGGTGCG.....GGGg....c                                                                  <  1:3287476/101‑1 (MQ=255)
               cTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c                                                                  <  2:5495142/101‑1 (MQ=255)
                tGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....g                                                             <  2:2879266/101‑1 (MQ=255)
                 gggCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....gg                                                            <  1:2768421/101‑2 (MQ=255)
                  ggCAAGCTCGGCTTCCAGGCCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....gga                                                           <  1:4407218/101‑3 (MQ=255)
                    cAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagc                                                         >  2:4237004/1‑97 (MQ=255)
                    cAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagc                                                         >  2:5655651/1‑97 (MQ=255)
                    cAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagc                                                         <  1:604756/101‑5 (MQ=255)
                    cAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagc                                                         <  2:2296930/101‑5 (MQ=255)
                    cAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagc                                                         >  2:4540525/1‑97 (MQ=255)
                     aaGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagcc                                                        <  2:2659941/101‑6 (MQ=255)
                     aaGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagcc                                                        >  2:4611253/1‑96 (MQ=255)
                     aaGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGGGCG.....GGGg....c....ggagcc                                                        >  1:5707759/1‑96 (MQ=255)
                     aaGCTCGGCTTCCAGACCGGCTGAGCCTTGGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagcc                                                        <  1:1623746/101‑6 (MQ=38)
                      aGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagccc                                                       <  2:184310/101‑7 (MQ=255)
                      aGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagccc                                                       >  1:5609830/1‑95 (MQ=255)
                       gCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagcccc                                                      >  1:867335/1‑94 (MQ=255)
                        cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAACCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagccccc                                                     <  2:3528109/101‑9 (MQ=38)
                        cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....gggcccacc                                                     >  2:1269995/1‑93 (MQ=255)
                        cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagccccc                                                     <  2:5185018/101‑9 (MQ=255)
                        cTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagcccca                                                     <  1:620523/101‑9 (MQ=255)
                         tCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagcccccg                                                    >  2:650778/1‑92 (MQ=38)
                         tCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagcccccg                                                    >  1:3619821/1‑92 (MQ=38)
                         tCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGGg....c....ggagcccccg                                                    >  1:3367476/1‑92 (MQ=38)
                                                     ggCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCg                                 >  2:5356405/1‑101 (MQ=9)
                                                     ggCAAAAAAACCCGACCCCGCCCCGCTCTCATCTTCCCCTAAATCCCTGGGGGGTGGGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCg                                 <  2:5065266/101‑1 (MQ=2)
                                                         aaaTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAAt                             >  1:2926960/1‑101 (MQ=9)
                                                          aaTAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATc                            >  2:3570127/1‑101 (MQ=9)
                                                             aaaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                         >  1:5167136/1‑101 (MQ=9)
                                                             aaaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                         >  1:5486119/1‑101 (MQ=9)
                                                             aaaCCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCctc                         >  2:2042639/1‑101 (MQ=9)
                                                                ccGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCa                      >  1:2946857/1‑101 (MQ=9)
                                                                 cGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCAc                     >  1:525419/1‑101 (MQ=9)
                                                                 cGACCCCCCCCCTCTCTCATCTTGCCCTAAATCCCCGGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCAc                     <  2:870099/101‑1 (MQ=2)
                                                                  gATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACg                    >  2:1658746/1‑101 (MQ=9)
                                                                  gATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACg                    >  1:1645515/1‑101 (MQ=9)
                                                                  gATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACg                    >  2:1501532/1‑101 (MQ=9)
                                                                    tCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGc                  >  1:4579903/1‑101 (MQ=9)
                                                                     cccgccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCt                 >  2:2974796/1‑101 (MQ=9)
                                                                      ccgccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGGAATCCTCTCACGCCtt                >  1:5039673/1‑101 (MQ=9)
                                                                      ccgccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCtt                >  1:1521849/1‑101 (MQ=9)
                                                                      ccgccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCtt                >  2:5771562/1‑101 (MQ=9)
                                                                      ccgccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCtt                >  2:714134/1‑101 (MQ=9)
                                                                      ccgccccgcTCTCATCTTGCCCTAAATACCCCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCtt                >  1:5140933/1‑101 (MQ=2)
                                                                       cgccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTc               >  1:1668561/1‑101 (MQ=9)
                                                                       cgccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGATTc               >  2:4096463/1‑101 (MQ=9)
                                                                        gccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTcc              >  2:3372749/1‑101 (MQ=9)
                                                                        gccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTcc              >  1:3676071/1‑101 (MQ=9)
                                                                         ccccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCa             >  2:4176033/1‑101 (MQ=9)
                                                                          cccgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGGTTCCAg            >  2:1086953/1‑101 (MQ=9)
                                                                            cgcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGtt          >  2:1218679/1‑101 (MQ=9)
                                                                             tctctCATCTTGCCCTAAATCCCTCGGGGGTGCGGGGGCGGAG....CCCCTGCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc         <  2:2245326/100‑1 (MQ=9)
                                                                             gcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc         >  1:2828355/1‑101 (MQ=9)
                                                                             gcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc         >  1:4844535/1‑101 (MQ=9)
                                                                             gcTCTCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTc         >  1:4297163/1‑101 (MQ=9)
                                                                              ctctCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCa        >  1:159353/1‑101 (MQ=9)
                                                                              ctctCATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCa        >  2:5198937/1‑101 (MQ=9)
                                                                                ctcATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTTCAGTTCAgg      >  1:2858633/1‑101 (MQ=9)
                                                                                 tcATCTTGCCCTAAATACCTCGGGGGCGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGGGAAATCCTCTCACGGCCTCCCGTTcccga     >  1:1301957/1‑97 (MQ=0)
                                                                                  cATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa    >  2:435806/1‑101 (MQ=9)
                                                                                  cATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa    >  2:1531976/1‑101 (MQ=9)
                                                                                  cATCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaa    >  1:5399624/1‑101 (MQ=9)
                                                                                   aTCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaaa   >  2:4410206/1‑101 (MQ=9)
                                                                                   aTCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaaa   >  2:667047/1‑101 (MQ=9)
                                                                                   aTCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGaaa   >  1:108653/1‑101 (MQ=9)
                                                                                    tCTTGCCCTAAATACCTCGGGGGTGCGGGGGCGGAGCCCCC....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAAt  >  2:4333009/1‑101 (MQ=9)
                                                                                                    |                                                                                        
CCCGCCGCGATGGTGCTGGGCAAGCTCGGCTTCCAGACCGGCTGCGCCTTCGAGGCGAAATAAACCGATCCCGCCCCGCTCTCATCTTGCCCTAAATACCTCGGGGGTGCG.....GGAG....C....GCCGGGTCGCCTCGGCGAAAGCCGAGGCGAAATCCTCTCACGGCTTCCAGTTCAGGAAAT  >  NC_014034/1253780‑1253955

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG