BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	580888 =	217 (0.820)	59 (0.220)	15/182	30.0	0.33	intergenic (+9/‑362)	RCAP_rcc00541/RCAP_rcc00542	hypothetical protein/hypothetical protein
*	?	NC_014034	2600961 =	28 (0.100)	59 (0.220)	15/182	30.0	0.33	intergenic (+23/‑118)	RCAP_rcc02424/surE	short‑chain dehydrogenase/reductase family oxidoreductase/5'‑nucleotidase SurE
Rejected: Position hash score below cutoff.

Only 100 of 247 total aligned reads displayed.


AACTGCTGGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTATCACCTTGGTGCAAATATCCG  >  NC_014034/580788‑580987


aaCTGCTGGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCg                                                                                                       <  2:1589142/101‑1 (MQ=255)


  ctgctgGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCggg                                                                                                     >  2:152950/1‑101 (MQ=255)


   tgctgGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCgggg                                                                                                    >  1:3056262/1‑100 (MQ=255)


   tgctgGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGc                                                                                                    >  1:1177834/1‑101 (MQ=255)


      tgGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGGCCGGGCCgg                                                                                                 >  1:286432/1‑101 (MQ=255)


      tgGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAgg                                                                                                 >  1:3239916/1‑101 (MQ=255)


       ggCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAggg                                                                                                <  2:1411096/101‑1 (MQ=255)


         cGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGGAggggg                                                                                              >  2:2511666/1‑101 (MQ=255)


          gAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGgc                                                                                             <  1:2960356/101‑1 (MQ=255)


          gAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGgc                                                                                             <  1:236585/101‑1 (MQ=255)


           aaaaGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGgcg                                                                                            <  2:493036/101‑1 (MQ=255)


            aaaGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGcggcgcccgc                                                                                           >  2:1987859/1‑92 (MQ=255)


             aaGCCTCGGCGTGGCGAAATCGCGGCTTACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCt                                                                                          <  1:4786916/101‑1 (MQ=255)


              aGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGgcgggg                                                                                         >  2:61523/1‑98 (MQ=255)


              aGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTg                                                                                         >  1:3404792/1‑101 (MQ=255)


               gCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGc                                                                                        >  2:1291327/1‑101 (MQ=255)


                ccTGGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGcc                                                                                       >  2:4908387/1‑101 (MQ=255)


                ccTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGcc                                                                                       <  1:5162331/101‑1 (MQ=255)


                 cTCGGGGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAGCCGCGCGTGCCAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGccc                                                                                      <  1:244957/101‑1 (MQ=255)


                 cTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGccc                                                                                      <  1:3493676/101‑1 (MQ=255)


                  tCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGcccc                                                                                     >  2:2287531/1‑101 (MQ=255)


                  tCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCGGgccc                                                                                     >  2:1117529/1‑101 (MQ=255)


                  gcGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGcccc                                                                                     <  2:1295752/100‑1 (MQ=255)


                    ggCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCct                                                                                   <  2:869028/101‑1 (MQ=255)


                      cGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGGAGGGGGCGCGGgccccccc                                                                                 >  2:639761/1‑98 (MQ=255)


                       gTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCtt                                                                                <  1:4455081/101‑1 (MQ=255)


                       gTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCtt                                                                                <  2:2603251/101‑1 (MQ=255)


                       gTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCtt                                                                                <  1:4100775/101‑1 (MQ=255)


                       gTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCGGCCCCCTCtt                                                                                >  1:573055/1‑101 (MQ=255)


                            gAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGGAAGTGGCGGTGGCCCCGCTTTTGGc                                                                           >  2:5170000/1‑101 (MQ=255)


                            gAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGGGCTCTCCCCCCGTTCGGc                                                                           >  1:3629823/1‑101 (MQ=255)


                             aaaTCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCt                                                                          <  2:2111860/101‑1 (MQ=255)


                             aaaTCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCt                                                                          <  2:4041776/101‑1 (MQ=255)


                              aaTCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTg                                                                         <  1:2702998/101‑1 (MQ=255)


                                  gcgGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGcc                                                                    <  1:3796888/101‑1 (MQ=255)


                                  gcgGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGcc                                                                    <  1:215316/101‑1 (MQ=255)


                                  gcgGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGcc                                                                    <  2:2993481/101‑1 (MQ=255)


                                  gcgGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGcc                                                                    <  2:3239716/101‑1 (MQ=255)


                                   cgGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCg                                                                   <  1:807085/101‑1 (MQ=255)


                                    ggCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGa                                                                  >  2:826614/1‑101 (MQ=255)


                                     gCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGaa                                                                 <  2:5638654/101‑1 (MQ=255)


                                      cTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGCGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGATGCCCCCCCCTTCGGCCG.CGCCGgaa                                                                >  2:4761537/1‑101 (MQ=255)


                                       tGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAAt                                                               <  1:4769762/101‑1 (MQ=255)


                                        gACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAAtt                                                              <  1:904167/101‑1 (MQ=255)


                                         aCCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTc                                                             <  2:1742867/101‑1 (MQ=255)


                                         aCCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTc                                                             <  1:1198479/101‑1 (MQ=255)


                                         aCCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTc                                                             <  1:3841900/101‑1 (MQ=255)


                                          cccTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCa                                                            <  1:5757341/101‑1 (MQ=255)


                                          cccTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCa                                                            <  1:4908668/101‑1 (MQ=255)


                                            cTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCAcc                                                          <  1:2666075/101‑1 (MQ=255)


                                            cTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCAcc                                                          <  2:5310210/101‑1 (MQ=255)


                                             tGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTTAccc                                                         >  2:5449171/1‑101 (MQ=255)


                                              gATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCAcccc                                                        <  1:1029592/101‑1 (MQ=255)


                                               aTCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCAccccc                                                       <  2:3945244/101‑1 (MQ=255)


                                               aTCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCAccccc                                                       <  1:152970/101‑1 (MQ=255)


                                                  cGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCggg                                                    <  2:4587879/101‑1 (MQ=255)


                                                   ggggggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.GGCCGGAATTCACCCCCcggg                                                   >  2:2243234/1‑100 (MQ=255)


                                                   ggggggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGa                                                   <  1:2316828/101‑1 (MQ=255)


                                                    gggggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGGGCTGCCCCCTCTTTCAGCTG.CGCCGAAAATCATCCCCCGGaa                                                  >  1:4612469/1‑100 (MQ=255)


                                                    gggggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGTGGCCCCCTCTTTCGGCGG.CGCCGGAAATCAGCCCCGCGag                                                  >  1:5519608/1‑100 (MQ=255)


                                                    gggggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGat                                                  <  1:1137000/101‑1 (MQ=255)


                                                      gggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGatat                                                >  1:1778345/1‑101 (MQ=255)


                                                       ggAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCGGGGATAtt                                               <  2:165219/101‑1 (MQ=255)


                                                        gAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATAttt                                              <  1:1993016/101‑1 (MQ=255)


                                                         aaaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTg                                             <  1:3191227/101‑1 (MQ=255)


                                                          aaCCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGa                                            <  2:2817497/101‑1 (MQ=255)


                                                             cgcgcgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGc                                         <  1:4430060/101‑1 (MQ=255)


                                                              gcgcgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGGAAATCACCCCCCGGGAATTTTAGGCa                                        >  1:512812/1‑101 (MQ=37)


                                                               cgcgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCaa                                       <  1:138147/101‑1 (MQ=255)


                                                               cgcgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCaa                                       >  1:2820090/1‑101 (MQ=255)


                                                               cgcgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCaa                                       <  1:2570713/101‑1 (MQ=255)


                                                                 cgTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGa                                     <  2:5549635/101‑1 (MQ=255)


                                                                    gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGGTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGAT.aa                                 <  2:4801549/101‑1 (MQ=255)


                                                                    gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGAT.aa                                 >  2:5503401/1‑101 (MQ=255)


                                                                    gACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGAT.aa                                 <  1:4307620/101‑1 (MQ=255)


                                                                       aaGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGAT.aaacg                              >  2:4391192/1‑98 (MQ=255)


                                                                       aaGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCCCTTTTGGCTGCCCCCGAACTTC.CCCCCGGGGAATTTTAGGCaaattgaaag                               >  2:4176965/1‑93 (MQ=19)


                                                                            gtTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGgcgc                          <  1:2203882/101‑1 (MQ=255)


                                                                            gtTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGgcgc                          <  2:2979290/101‑1 (MQ=255)


                                                                              tCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCt                        <  2:2870013/101‑1 (MQ=255)


                                                                               ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCCCCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa                       <  1:4120510/101‑1 (MQ=255)


                                                                               ccGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTa                       <  2:3288902/101‑1 (MQ=255)


                                                                                 gCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATc                     <  1:5100115/101‑1 (MQ=255)


                                                                                     cGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCt                 <  2:1883855/101‑1 (MQ=255)


                                                                                     cGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCt                 <  2:4324631/101‑1 (MQ=255)


                                                                                      gATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCtt                <  2:1063760/101‑1 (MQ=255)


                                                                                      gATTGAGGCGGCCCCGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCAAAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCtt                <  2:2365072/101‑1 (MQ=21)


                                                                                       aTTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTg               <  2:4137573/101‑1 (MQ=255)


                                                                                       aTTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTg               <  2:3056088/101‑1 (MQ=255)


                                                                                        ttGAGGCGGCCCGGGCAGGGGGCGGTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTgg              >  1:1838789/1‑101 (MQ=255)


                                                                                        ttGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCCCCCCCCGGATATTTGAGGCCAGATAAACGGGCGACTCTCACCCTgg              >  1:1340814/1‑101 (MQ=21)


                                                                                        ttGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTgg              >  2:5646031/1‑101 (MQ=255)


                                                                                           aGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGc           <  2:5058923/101‑1 (MQ=255)


                                                                                                gcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAata      <  1:5259866/101‑1 (MQ=255)


                                                                                                gcCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAata      <  2:3426160/101‑1 (MQ=255)


                                                                                                  ccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCCCCCCCGGGATATTTGAGGCAAGATAAAAGGGCGCCTATCCCCTTGGTGCAAATATc    >  1:5516124/1‑101 (MQ=21)


                                                                                                  ccGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATc    <  2:1125320/101‑1 (MQ=255)


                                                                                                   cGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATcc   <  2:3119718/101‑1 (MQ=255)


                                                                                                    gggCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCg  >  2:3673850/1‑101 (MQ=255)


                                                                                                    gggCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAAATCACCCCCGGGACATTTGAGGCAAGATAAACGGGCGCCTATCACCTTGGTGCAAATATCCg  >  1:3715180/1‑101 (MQ=25)


AACTGCTGGCGAAAAGCCTCGGCGTGGCGAAATCGCGGCTGACCCTGATCCGGGGGGAAACCGCGCGTGACAAGGTGTTCCGCCTCGATTGAGGCGGCCCGGGCAGGGGGCGCTGCCCCCTCTTTCGGCTG.CGCCGAAATTCACCCCCGGGATATTTGAGGCAAGAT.AACGGGCGCCTATCACCTTGGTGCAAATATCCG  >  NC_014034/580788‑580987

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG