BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1224228	193 (0.930)	27 (0.130)	14/142	25.3	0.12	intergenic (‑100/+69)	hisF/hisA	imidazole glycerol phosphate synthase subunit HisF/1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino] imidazole‑4‑carboxamide isomerase
*	?	NC_014034	2249335 =	192 (0.660)	27 (0.130)	14/142	25.3	0.12	intergenic (‑131/‑174)	parE/RCAP_rcc02080	DNA topoisomerase IV subunit B/HAD superfamily hydrolase
Rejected: Position hash score below cutoff.

Only 100 of 283 total aligned reads displayed.


CACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTG  >  NC_014034/2249236‑2249434


cacaGAAACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCt                                                                                                           <  1:959722/101‑1 (MQ=255)


 acaGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCtt                                                                                                          >  2:4342402/1‑101 (MQ=255)


  caGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCttt                                                                                                         <  1:4700531/101‑1 (MQ=255)


  caGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCttt                                                                                                         <  2:3250054/101‑1 (MQ=255)


     aTACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCAt                                                                                                      <  2:3612529/101‑1 (MQ=255)


       aCCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCt                                                                                                    <  1:5029491/101‑1 (MQ=255)


        ccGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCtt                                                                                                   <  1:382068/101‑1 (MQ=255)


         cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg                                                                                                  <  1:890501/101‑1 (MQ=255)


         cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg                                                                                                  <  1:190320/101‑1 (MQ=255)


         cGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg                                                                                                  <  1:332820/101‑1 (MQ=255)


         cGCAGCTGGGGCCCCGTGGGCAAGAAGGGGGATCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTg                                                                                                  <  2:804596/101‑1 (MQ=37)


           cAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGcc                                                                                                >  2:509718/1‑101 (MQ=255)


           cAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGcc                                                                                                >  2:2206460/1‑101 (MQ=255)


            aGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCg                                                                                               <  1:4109309/101‑1 (MQ=255)


              cTTGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaa                                                                                             >  2:1073681/1‑101 (MQ=255)


                tGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaaa                                                                                           <  1:3061319/101‑1 (MQ=255)


                tGGGCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGaaaa                                                                                           >  2:3555088/1‑101 (MQ=255)


                 gggCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAat                                                                                          >  2:4113417/1‑101 (MQ=255)


                  ggCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAata                                                                                         <  1:5451581/101‑1 (MQ=255)


                  ggCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAata                                                                                         <  2:4960847/101‑1 (MQ=255)


                   gCACCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAatat                                                                                        <  1:265060/101‑1 (MQ=255)


                     aCCCGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTCCCGAAAATATcc                                                                                      <  1:3126609/101‑1 (MQ=255)


                      cccGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATccc                                                                                     <  1:2900064/101‑1 (MQ=255)


                      cccGGGGCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATccc                                                                                     <  2:5388484/101‑1 (MQ=255)


                           ggCAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCggggg                                                                                <  2:4536711/101‑1 (MQ=255)


                             cAAGAAGGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGt                                                                              <  1:5671797/101‑1 (MQ=255)


                              aagaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCgggggggg                                                                             >  1:2575173/1‑99 (MQ=255)


                              aagaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg                                                                             <  2:4910998/101‑1 (MQ=255)


                              aagaagGGGGCTCTGCCCCCGTCCCGGGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg                                                                             <  1:2059922/101‑1 (MQ=255)


                              aagaagGGAGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTg                                                                             >  2:169533/1‑101 (MQ=255)


                               agaagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGa                                                                            <  2:3869322/101‑1 (MQ=255)


                               agaagGGGGCTCGGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTCCTGAAAATATCCCGTGGGGTGa                                                                            <  2:191458/101‑1 (MQ=37)


                                 aagGGGGCTCTGCCCCCTTCCCGTGCCGGGCCT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.t                                                                         <  2:2017801/101‑1 (MQ=37)


                                 aagGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.t                                                                         <  2:249762/101‑1 (MQ=255)


                                  agGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.Tg                                                                        >  2:2174038/1‑101 (MQ=255)


                                  agGGGGCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.Tg                                                                        <  2:2840027/101‑1 (MQ=255)


                                    ggggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgc                                                                      <  2:5601140/101‑1 (MQ=255)


                                      ggCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGgcgc                                                                    <  1:3463851/101‑1 (MQ=255)


                                       gctctccccccGTCCCGTGCCGGGACC.CCCCCGGGATTTTTGAGGAAAGAGGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCa                                                                   <  1:169553/94‑1 (MQ=37)


                                       gCTCTGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCa                                                                   >  1:4309378/1‑101 (MQ=255)


                                        ctctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g                                                                >  2:1104055/1‑101 (MQ=255)


                                        ctctGCCCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..g                                                                <  2:3985903/101‑1 (MQ=255)


                                          ctgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc                                                              >  1:3558700/5‑101 (MQ=255)


                                          cggcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCGAGATGAA...GGTG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..Gcc                                                              <  2:4812906/97‑1 (MQ=255)


                                           tgcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCa                                                             <  1:3618486/98‑1 (MQ=255)


                                            gcccccGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCag                                                            <  1:1497574/99‑1 (MQ=255)


                                               cccgtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgg                                                         <  2:4689248/101‑1 (MQ=255)


                                               cacatccagtACCGGGACT.CCCCCGGGATATTTGAGGCAAGCTGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgg                                                         <  2:5704248/97‑1 (MQ=37)


                                                  gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg                                                      <  1:251357/101‑1 (MQ=255)


                                                  gtcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAggggg                                                      >  1:2258931/1‑101 (MQ=255)


                                                   tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg                                                     >  2:1499338/1‑101 (MQ=255)


                                                   tcccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAgggggg                                                     <  2:4370485/101‑1 (MQ=255)


                                                     ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCCGAGGGGGG.Ca                                                  >  2:2572536/1‑101 (MQ=255)


                                                     ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.Ca                                                  <  1:4941439/101‑1 (MQ=255)


                                                     ccgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.Ca                                                  >  2:2728021/1‑101 (MQ=255)


                                                      cgtGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAg                                                 <  2:4629769/101‑1 (MQ=255)


                                                      cgcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAggggg                                                      >  2:3850774/8‑101 (MQ=18)


                                                       gcaagcggACTCCCCCCGGGATATTTGCAGCAAGATGAAACCGGAT..GCCTTTCATCTTGCCCGAAATATCCCGGGGGGTGAA.TGGCGAA..GCCAGAgggggg                                                     <  1:668318/95‑1 (MQ=18)


                                                          ccGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cc                                           >  2:2292392/1‑101 (MQ=255)


                                                           cGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccc                                          >  1:5282299/1‑101 (MQ=255)


                                                             ggccT.CCCCCGGGATATTGGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccc                                        <  1:1024759/98‑1 (MQ=255)


                                                             ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccc                                        <  2:5644335/101‑1 (MQ=255)


                                                             ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccc                                        >  1:4269649/1‑101 (MQ=255)


                                                             ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccc                                        >  2:4051320/1‑101 (MQ=255)


                                                             ggACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.ccccc                                        >  2:3739006/1‑101 (MQ=255)


                                                                cT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.cccccctt                                     <  1:4220541/101‑4 (MQ=255)


                                                                    ccccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTcgc                                   >  2:2375026/1‑101 (MQ=255)


                                                                     cccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCCCCtgc                                     >  1:1041015/1‑99 (MQ=2)


                                                                     cccGGGATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCCCCtgc                                     >  2:213729/1‑99 (MQ=2)


                                                                      ccGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCgcgg                                 <  2:1759336/101‑1 (MQ=255)


                                                                       cGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCgcggg                                <  1:3766694/101‑1 (MQ=255)


                                                                        gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CGC.GG.CCCCCCTCgggggcg                              >  1:2812371/1‑101 (MQ=37)


                                                                        gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCgcgggc                               <  1:3268213/101‑1 (MQ=255)


                                                                        gggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCgcgggc                               >  1:4592779/1‑101 (MQ=255)


                                                                         ggATATTTGCGGCAAGATGAA...GGGGCATGATTTCATCTTGCCCGAAATATCCC.AGGGGTGAATTGGCCAAAGGCCAAGAGGGGG.CAG.CG.CCCCCtgcaccg                                 <  2:4900346/101‑7 (MQ=0)


                                                                         ggATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCgcgggcg                              >  1:1103886/1‑101 (MQ=255)


                                                                           atatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGggcggc                            >  2:5111094/1‑101 (MQ=255)


                                                                            ttttggAGGAAAGAAAAG...GGGG..GGTTTTAATCTTGCCAAAAATATCCGGGGGGGTGAA.TGGCGCA..GCAAGGGGGGGG.CAGCCC.CCCCCTTCGCGGGCGGcc                           <  2:1175788/96‑1 (MQ=255)


                                                                            tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGcc                           <  1:5614770/101‑1 (MQ=255)


                                                                            tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGcc                           <  1:223948/101‑1 (MQ=255)


                                                                            tatTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAAGATCCGGGGGGGTGAA.GGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGcc                           <  1:1374223/101‑1 (MQ=37)


                                                                              tttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGGGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCcgc                         >  2:2914001/1‑101 (MQ=255)


                                                                               ttGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGccaga                        >  2:5220671/1‑98 (MQ=255)


                                                                                tGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGa                       >  1:1217705/1‑101 (MQ=255)


                                                                                  aGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGAcg                     >  2:4950824/1‑101 (MQ=255)


                                                                                        gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGcgcc               >  1:5389961/1‑101 (MQ=255)


                                                                                        gATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGcgcc               <  2:3335113/101‑1 (MQ=255)


                                                                                           gga...GGGG..GGTTTTTCTTTTTGCGAAAATTGCCCGGGGGGGGAAGGGGCCCC..GCCGGGGGGGGGCCCC.CC.CCCCCTTCGCGGGCGGCCGCGACGCGcgccgc             <  1:1965046/99‑1 (MQ=255)


                                                                                           gAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCa            >  2:3033965/1‑101 (MQ=255)


                                                                                           gAA...GGGG..GGCTTTCATCTGGCCGAAAATGTCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCa            <  1:475399/101‑1 (MQ=37)


                                                                                            aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCaa           >  1:1283618/1‑101 (MQ=255)


                                                                                            aa...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCaa           >  1:3178166/1‑101 (MQ=255)


                                                                                             a...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAAc          <  1:1605040/101‑1 (MQ=255)


                                                                                              gatggtg..ggCTTTCAACTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCa            <  2:744295/95‑1 (MQ=25)


                                                                                                  ggg..ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAg        <  2:4467326/101‑1 (MQ=255)


                                                                                                       ggCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTc     <  2:4237840/101‑1 (MQ=255)


                                                                                                        gCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCACCAGGTCg    >  1:1329735/1‑101 (MQ=255)


                                                                                                          tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CGG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCggc  >  2:5482441/1‑99 (MQ=255)


                                                                                                          tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg  >  1:5154420/1‑101 (MQ=255)


                                                                                                          tttCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CGCCCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTg  >  1:2357232/1‑101 (MQ=255)


CACAGATACCGCAGCTTGGGCACCCGGGGCAAGAAGGGGGCTCTG.CCCCGTCCCGTGCCGGGACT.CCCCCGGGATATTTGAGGCAAGATGAA...GGGG..GGCTTTCATCTTGCCGAAAATATCCCGGGGGGTGAA.TGGCGCA..GCCAGAGGGGGG.CAG.CG.CCCCCTTCGCGGGCGGCCGCGACGCGCGCCGCAACAGGTCGTG  >  NC_014034/2249236‑2249434

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG