New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1253895 =43 (0.150)42 (0.150) 18/196 29.7 0.38 intergenic (+53/+38) RCAP_rcc01181/hisH hypothetical protein/imidazole glycerol phosphate synthase subunit HisH
?NC_014034 = 3276387 96 (0.330)intergenic (‑139/+110) RCAP_rcc03082/RCAP_rcc03083 lipoprotein/membrane bound YbgT‑like protein
Rejected: Position hash score below cutoff.

GCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGACGCGGGATCGGGG  >  NC_014034/3276287‑3276487
                                                                                                          |                                                                                                              
gCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.cccc                                                                                                                <  1:1535200/101‑1 (MQ=255)
 cACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.ccccc                                                                                                               <  2:4485226/101‑1 (MQ=255)
       gggggCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.ggg                                                                                                     >  1:2514025/1‑101 (MQ=255)
         gggcaaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.ggggg                                                                                                   >  1:2795715/1‑99 (MQ=255)
          ggcaaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.gggggg                                                                                                  >  1:214901/1‑98 (MQ=255)
           gcaaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.ggggggc                                                                                                 >  1:568439/1‑97 (MQ=255)
           gcaaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGcgc                                                                                                 >  1:570689/1‑101 (MQ=255)
             aaggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.ggggggggg                                                                                               >  1:432331/1‑95 (MQ=255)
               ggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.gggggggcgcg                                                                                             >  1:2796050/1‑93 (MQ=255)
               ggggcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.gggggggcgcg                                                                                             >  2:4479984/1‑93 (MQ=255)
                  gcaaTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGgcc.gcgcgg                                                                                         >  1:3201714/1‑101 (MQ=255)
                     aTGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCgcc.gcgcgggcg                                                                                      >  1:5094059/1‑101 (MQ=255)
                       ccgatctcaGGCCCCCCCGG.CCACCGGCCCCCGTTTTCTTCTGGCCCC.AAGTCCGC.GGGGGGCCG.GGGGGGGGCG.CCCCC...GGC.GGGTCgcc.gcgcggccgc                                                                                     <  2:2350307/93‑1 (MQ=9)
                        cggcgCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCggc.gcgcgggcgc.g.c                                                                                 >  2:2891784/1‑101 (MQ=255)
                           cgcAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGgc.gcgcggccgc.c.cggg                                                                              >  2:2365774/1‑100 (MQ=18)
                             cAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGTCgcc.gcgcggccgccgatcgg                                                                              >  1:2350441/1‑94 (MQ=255)
                             cAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGgc.ccggggccgc.g.cggggg                                                                            >  1:3930872/1‑98 (MQ=18)
                              aaGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTTTTGGCCC.AAATCCGC.CGGGGGTCC.GGGGGCGGAC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.Gaa                                                                          <  2:2795554/101‑1 (MQ=255)
                              aaGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.c.cggc.gca                                                                          >  1:1411897/1‑99 (MQ=255)
                               aGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGGC.GCGCGGCCGC.C.CGGC.Ggaa                                                                         >  2:5423822/1‑101 (MQ=17)
                                ggCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGGC.GCGCGGCCGCGG.CGGC.Ggaa                                                                         >  1:2066914/1‑101 (MQ=17)
                                ggCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.g.cggc.gcgac                                                                        >  1:4693012/1‑97 (MQ=255)
                                agCCCCCCGGGCCACCCGCCCCCCT.TTTCTTCTTGGCCA.AAATCCGC.GGGGGGTCC.GGGGGCGGAC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.Gaaa                                                                         <  2:4709908/100‑1 (MQ=14)
                                 gCCCCCCGGG.CAGCCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGCC.GCGCGGCCGC.G.CGGC.GGAACa                                                                       >  1:3135853/1‑101 (MQ=17)
                                 gCCCCCCGGG.CACCCGCCCCCCG.TTTCTTCTGGGCCA.AAATCCGC.GGGGGGCCG.GGGGGGGGAC.CCCCG...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACa                                                                       <  1:2806974/101‑1 (MQ=17)
                                  ccccccGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGcc.gccgcgccgc.c.cgggggcacaa                                                                       >  2:2786477/1‑93 (MQ=17)
                                   cccccGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGCC.GCGCGGCCGC.G.CGGCGGAAACaa                                                                      >  2:271282/1‑101 (MQ=17)
                                   cccccGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCCCCGCCGC.g.ccgc.gggcccaa                                                                     >  2:2142532/1‑94 (MQ=17)
                                    ccccGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGCC.GCGCGGGCGC.G.CGGC.GAGACaaaa                                                                    >  1:4788605/1‑100 (MQ=17)
                                    ccccGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.G.CGGC.GCAACAAAg                                                                    >  2:547646/1‑101 (MQ=255)
                                     ccgggg.CACCCGCCCCCCG.TTTCTCCGTGGCCC.AAATACGC.CGGGGGTCG.GGGGGCGGAC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAgg                                                                   <  2:1482708/98‑1 (MQ=14)
                                       cGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGCC.GCGCGGCCGC.G.CGGC.GGAAAAAAAgac                                                                 >  2:3456106/1‑101 (MQ=17)
                                       cGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCA.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGGC.CCGGGGCCGC.G.CGGC.GGAACCAAAgaa                                                                 >  1:2629979/1‑100 (MQ=14)
                                        ggg.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGCC.GCGCGGCCGC.G.CGGG.GGAAAAAAAgaaa                                                                >  2:5394327/1‑99 (MQ=14)
                                         ggccaccccccccccT.TTTCTTCTGGGCCC.AAATCCGC.CGGGGGCCG.GGGGGCGGAC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGgacc                                                                <  1:3691150/91‑1 (MQ=14)
                                         gg.CACCCGGCCCCCG.TTTCTTCTTGGCCC.AAATCCGC.CGGGGGTCG.GGGGGCGGAG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGgaccg                                                               <  2:3549409/101‑1 (MQ=255)
                                          g.CACCCGGCCTCCG.TTTCTTCTTGGCCA.AAATACGC.CGGGGGGCC.GGGGGCGGAG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGgaccg.a                                                             <  2:5320733/101‑1 (MQ=17)
                                            cacccGCCCCCTT.TTTTTTCTGGGCCA.AAATCCGC.GGGGGGCCG.GGGGGCGGAC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACGAAGgaccg.ac                                                            <  1:5557843/98‑1 (MQ=9)
                                             aaCCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGGC.CCGCGG.CGC.GCCGGC.GGAAAAAAGaaacg.acc                                                           >  2:1149454/1‑101 (MQ=14)
                                             aaCCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGCC.GCCCGGCCGC.G.CGGG.GGAAAAAAAgaccg.acc                                                           >  2:1629249/1‑101 (MQ=14)
                                                ccccccccT.TTTTTTTTCGGCCC.AAA.ACGC.GGGGGGGGG.GGGGGGGGCG.CCCCCCCGGGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGaccg.accg                                                          <  2:5009365/98‑1 (MQ=9)
                                                cGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.G.CGGC.GGAACAAAAGACCC.CCCggg                                                        >  1:118987/1‑101 (MQ=14)
                                                  gCCCCCC.TTTTGTCGGGGCCC.AAA.ACGCGCGGGGGCGC.GGGGGGGGGC.CCCCCG..GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGc                                                       <  2:4230510/101‑1 (MQ=12)
                                                   cccccT.TTTCTTCCTGGCCC.AAAACCGC.CGGGGGGCCGGGGGGCGGCC.CCCCG...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCa                                                      <  1:1611987/101‑1 (MQ=18)
                                                    ccccG.TTTCTTCTTGGCCA.AAATCCGC.CGGGGGCCC.GGGGGCGGAC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACAGGGCAGc                                                    <  1:2748797/101‑1 (MQ=18)
                                                     cccG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.CCGCGGCCGC.G.CGGG.GGAAAAAAAGACCG.ACCGCGCAGcc                                                   >  2:4366149/1‑101 (MQ=17)
                                                      cgg.TTTCTTCTTGGCGC.AAAGCCGG.CGGGGGTCC.GGGGGCGGAG.CCCCG...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGccc                                                  <  2:2484659/99‑1 (MQ=18)
                                                      ccG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.CCGCCGGCCC.G.CGGC.GGAAAAAAAGAACG.ACCGGGCAGccc                                                  >  2:3671755/1‑101 (MQ=17)
                                                       cG.TTTCTTCTTGGCCC.AAATGCGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGcccc                                                 <  1:4480256/101‑1 (MQ=255)
                                                        g.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.G.CGGC.GGAACAAAAGAACG.ACCggggcggcccc                                                >  1:4277357/1‑93 (MQ=17)
                                                        g.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.CCGGGGGCGC.C.CGGC.GCGACAAAAGACCG.AACGCGGCGccccc                                                >  1:4393483/1‑101 (MQ=14)
                                                           ttcttcTGGGCCC.AAATCCGC.GGGGGGTCG.GGGGGCGGAC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCg                                              <  2:2342777/101‑1 (MQ=21)
                                                            tcttctTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCgg                                             <  2:3201525/101‑1 (MQ=255)
                                                            tcttctTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGCC.GCGCGGCCCG.G.CGGG.GGAACAAAAGGACA.ACCGGGGAGgccccccg                                             >  1:2604982/1‑99 (MQ=9)
                                                            tcttctTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGCC.CCCCGGCCCC.G.CGGG.GAAACAAAAGACCC.ACCGGGGGGcccccccc                                             >  1:2346307/1‑99 (MQ=17)
                                                            tcttctTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGGCGC.G.CGGG.GGCACAAAAGACCG.ACCCGGCGGcgcccccc                                             >  1:4446644/1‑99 (MQ=14)
                                                            tcttctTGGCCA.AAAGACGC.GGGGGGTCC.GGGGGCGGAC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCgg                                             <  2:4772451/101‑1 (MQ=21)
                                                             cttcttGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGCC.GCCCGCCCCC.G.CGGC.CGAACAAAAGACTG.AACCCGGAGcccccccgg                                            >  2:1367600/1‑98 (MQ=9)
                                                             cttcttGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.G.CCGC.GGGACAAAAGAGCG.CCCGGGCAGacccccccg                                            >  1:2893782/1‑98 (MQ=14)
                                                             cttcttGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGCGGCC.CCGCGGCCGC.G.CCGC.GGCACAAAGCAGCC.GCAGGGCCGccccccccg                                            >  2:2744179/1‑98 (MQ=9)
                                                              ttcttGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGCGGGGGGGCCGGCGGGGCCGC.G.CGGG.CAAAAAAA..ACCG.GCCCGGCAGcccccccggc                                           >  1:3663933/1‑97 (MQ=2)
                                                              ttcttGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGGC.GCGCGGCCGC.G.CGGC.GGAACAAAAGAACGAACGGGGCGGCCCCCCgcc                                            >  2:5080945/1‑99 (MQ=14)
                                                               tcttGGCCCAAAATGCGC.GGGGGGGCC.GGGGGGGGGG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTc                                           <  2:1602091/101‑1 (MQ=21)
                                                                  tGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGGCGC.G.CGGC.GGAAAAAAAGACCG.ACCGGGGCGCCCCCCCGGCGGcc                                       >  1:1695841/1‑101 (MQ=17)
                                                                  tGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.CCGCGGCCGC.G.CGGC.GCAACAAAAGACCC.ACCGGGCCGcccccccccccgcc                                       >  1:1735593/1‑93 (MQ=17)
                                                                   ggCCC.AAATGCGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCa                                      <  2:568389/101‑1 (MQ=255)
                                                                   ggCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCCCG.GCCGGGCCGG.G.CGGC.GGAAGAAAAGAGCG.AGCGGGGAGCCCGCCGGGCGGccg                                      >  2:5600198/1‑100 (MQ=9)
                                                                    gCCC.AAACCCGCGCGGGGGCCG.GGGGGCGGGC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCa                                      <  2:1441036/101‑1 (MQ=21)
                                                                      cc.AAATGCGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTg                                  <  2:2795889/101‑1 (MQ=255)
                                                                       c.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.G.CGGC.GGAACAAAAGAACG.ACCGGGCAGGCCCCCCGGCGGcccggga                                  >  2:3712675/1‑96 (MQ=17)
                                                                           aTACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGGGGCC.GCCCGGCCCC.G.CGGG.GGAACAAAAGACCG.GCCGGGCGGCCCCCCGGCCgggccggggaac                               >  1:5550435/1‑91 (MQ=12)
                                                                           aTACGC.CGGGGGTCC.GGGGGCGGAC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAAcc                              <  2:2633418/101‑1 (MQ=255)
                                                                            tACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAAccc                             <  1:2786638/101‑1 (MQ=255)
                                                                                c.cGGGGGCCG.GGGGGCGGAC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGaaa                         <  2:432287/101‑1 (MQ=255)
                                                                                   gggggTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.G.CGGG.GGAACAAAAGACCG.ACCCGGCAGGCCCCCCGGCGGCCC.GGGAAACCGAAAcc                       >  2:3483155/1‑100 (MQ=18)
                                                                                   gggggTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.G.CGGC.GGAAAAAAGGACCG.ACCGGGCAGCCCCCCCGGCGGGCC.CGGGACCCGAAAcg                       >  2:3165372/1‑101 (MQ=18)
                                                                                   gggggCCCGGGGGGCGGCC.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAAc                        <  1:5081230/101‑1 (MQ=37)
                                                                                    ggggTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.G.CGGC.GGAACAAAGGACCG.CCCCGGCAGCCCCCCCGCCGGCCC.GGGAACCCCCAAcgc                      >  1:3621505/1‑101 (MQ=18)
                                                                                      ggTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGGCGC.G.CGGC.GGAACAAAAGACCG.ACCGGGCAGCCCCCCGGGCGGCCC.GTGGACCCCCAACCCGa                    >  2:819027/1‑101 (MQ=21)
                                                                                       gTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGGC.GCGCGGGCCC.G.CCGG.GGAACAAAAGACCG.ACCGGGGCGCCCCCCCGGCCGCCG.GTGGACCCCCAAcgcccg                   >  1:3086903/1‑98 (MQ=12)
                                                                                       gTCC.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.G.CGGC.GGAAAAAAAGACCG.ACCGGGCCGCCCCCCCGTCGGCCAGGGGAACCCGaacgcgca                    >  1:2612839/1‑95 (MQ=18)
                                                                                          c.GGGGGCGGAG.CCCCC...GGC.GGGGCGGC.GCGCGGGCGC.G.CGGC.GGAACAAAAGAAAG.ACCGGGCAGGCCCCCCGGCGGCCA.GGGGACCCGAAACGCCGAggg                >  1:2421619/1‑101 (MQ=16)
                                                                                          c.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGGCGC.G.CGGC.GGAACAAAAGACCG.ACCGGGGCGCCCCCCCGGCGGCCC.GGGAACCCCCAAAGCGAAggg                >  2:2916036/1‑101 (MQ=16)
                                                                                          c.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.C.CGGC.GGAACAAAAGACCG.ACCGGGCCGCCCCCCCCGCGGCCC.GTGCACCCGACACGCGGAggg                >  2:936424/1‑101 (MQ=21)
                                                                                          c.GGGGGCGGAG.CCCCC...GGC.GGGGCGCC.CCGCGGGCGC.G.CGGC.GGAACAAAAGACCG.ACCGGGCCGGCCCCCCGGCGGGCC.GGGAAACCGAAAAGCCAAagg                >  2:3150595/1‑101 (MQ=12)
                                                                                            gggggCGGCGCCCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAggg                <  2:3663705/101‑1 (MQ=255)
                                                                                              gggcgggccccccg...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGAc              <  2:5564441/92‑1 (MQ=38)
                                                                                              ggcgggcccccccg...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGAc              <  1:385479/92‑1 (MQ=38)
                                                                                                  ggAG.CCCCC...GGC.GGGGCGCC.GCGCGGCCGC.G.CGGG.GGAACAAAAGACCG.ACCGGGGAGCCCCCCCGGCGGCCC.GGGAACCCCAAACGCGCAGGGGCGCggg         >  2:1585351/1‑101 (MQ=21)
                                                                                                   gcccccccc...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGACGCggg         <  2:4779448/97‑1 (MQ=255)
                                                                                                   gAG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGACGCGGGa        <  1:5424112/101‑1 (MQ=255)
                                                                                                    gccccccg...GGC.GGGTCTCC.GCGCGCCCGC.G.CGGC.GAAACAAAGGCCCG.ACCGGGCACCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGACGCGGGa        <  2:1406763/98‑1 (MQ=255)
                                                                                                    aG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCCGGCGGCCC.GTGAACCCCAAACGCGAAGGGACGCggggt       >  2:335820/1‑99 (MQ=38)
                                                                                                      cccccc...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGACGCGGGATc      <  1:3712903/100‑1 (MQ=255)
                                                                                                      cacccc...GCC.GGGTCGCC.GCGCCGCCGC.G.CGGC.GAAACAAAGGACCG.TCCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGACGCGGGATc      <  2:5749796/99‑1 (MQ=255)
                                                                                                       ccccc...GGC.GGGTCGCC.GCGCGGGCGC.G.GGGC.GGAACAAAAGAACG.ACCGGGCAGCCCCCCCGGCGGGCC.GTGAACCCGAAAAACGAAGGGACGCGGGaggg     >  2:3704288/1‑98 (MQ=255)
                                                                                                       ccccc...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGACGCGGGATCg     <  2:718168/101‑1 (MQ=255)
                                                                                                          cc...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGACGCGGGATCgggg  <  1:4670233/101‑1 (MQ=255)
                                                                                                          |                                                                                                              
GCACGACGGGGGCAAGGGGCAATGCGGCGCAAGGCCCCCCGGG.CAACCGGCCCCCG.TTTCTTCTTGGCCC.AAATACGC.CGGGGGTCC.GGGGGCGGAG.CCCCC...GGC.GGGTCGCC.GCGCGGCCGC.G.CGGC.GAAACAAAGGACCG.ACCGGGCAGCCCCCCGGTCGGCCA.GTGAACCCGAAACGCGAAGGGACGCGGGATCGGGG  >  NC_014034/3276287‑3276487

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG