BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	408498 =	26 (0.130)	80 (0.390)	20/140	21.2	0.57	intergenic (+116/+32)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	= 1639998	95 (0.330)	80 (0.390)	20/140	21.2	0.57	intergenic (+78/‑67)	mccB/mccA	methylcrotonoyl‑CoA carboxylase subunit beta/methylcrotonoyl‑CoA carboxylase subunit alpha
Rejected: Position hash score below cutoff.

Only 100 of 148 total aligned reads displayed.


GCTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGG....G.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGC  >  NC_014034/1639898‑1640087


gCTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCgggggg                                                                                                              <  2:1220723/101‑1 (MQ=255)


gCTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCgggggg                                                                                                              <  1:3006401/101‑1 (MQ=255)


gCTTCGGGATCTTCCGGATGGGACTTTCGATGCCTCCGGCGGGGATTTTTGGG.GGAGGATG.AAACCCAC.CCCTTTC.ATCTTGCCCC.AAATATCCCgggggg                                                                                                              <  2:2013190/101‑1 (MQ=25)


 cTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGc                                                                                                             <  2:2244449/101‑1 (MQ=255)


  ttCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGG.GGCAGATG.AAAACCAT.CCCCTTC.CTCTTGCCCC.CAAAATTCCCGGGGGc.c                                                                                                           >  1:259163/1‑101 (MQ=255)


    cGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGG.GGAAGATG.AAAACCAT.CCCTTTT.ATCTTTCCCC.AAATATCCCGGGGGGG.CC..g                                                                                                       >  2:3373345/1‑101 (MQ=25)


    cGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTGGG.GCAAGAAG.AAACCCAT.CCCTTTC.ATCTTGTCCC.AAATAACCCGGGGGGC.CC..g                                                                                                       >  2:3465685/1‑101 (MQ=38)


    cGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..g                                                                                                       <  1:5638145/101‑1 (MQ=255)


    cGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGAAATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..g                                                                                                       >  1:4809430/1‑101 (MQ=255)


     gggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGGATTTTGG.GGAAGATG.AAAACCAA.CCCTTTC.ATCTTTCCCC.CAAAATACCCGGGGGC.CC..gg                                                                                                      >  1:4686693/1‑101 (MQ=255)


     gggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTTGG.GCAAAATG.AAAACCAT.CCCCTTC.ATCTTTCCCC.AAAAATCCCCGGGGGT.CC..gg                                                                                                      >  2:2712580/1‑101 (MQ=37)


      ggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..ggg                                                                                                     <  2:4809149/101‑1 (MQ=255)


      ggATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..ggg                                                                                                     <  2:3210675/101‑1 (MQ=255)


       gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTTGG.GGAAGATGAAAAACAAC.CCCCTTCTCTTTTCCCCC.AAATACCCGGGGGGGC.CC..gg                                                                                                      >  1:1177311/1‑101 (MQ=16)


       gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..gggg                                                                                                    <  1:881499/101‑1 (MQ=255)


       gATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..gggg                                                                                                    <  2:4699168/101‑1 (MQ=255)


        aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGGAATTTGGG.GGAAGAAG.AAAACCATACCCTTTT.TTTTTTCCCC.AAA.ATCCCGGGGGGG.CC..cggg....g                                                                                               >  1:5418433/1‑101 (MQ=255)


        aTCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..gggg....g                                                                                               <  1:1652854/101‑1 (MQ=255)


            tCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..gggg....ggcag                                                                                           <  2:4038622/101‑5 (MQ=255)


             ccGGATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGG.GGAAGATG.AAAACCAT.CCCTTTC.ATCTTTCCCC.CAATATCCCCGGGGGC.CC..cggg....ggcagc                                                                                          >  1:4502833/1‑96 (MQ=25)


             ccGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..gggg....ggcagc                                                                                          <  1:4349760/101‑6 (MQ=255)


              cGGATGTGAGTTACGCTGCGTCCGGCGGGGATATTTGGG.GCAAGATG.AACCCCAA.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..gggg....ggcagcg                                                                                         <  2:5784217/101‑7 (MQ=21)


              cGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCTCGGGGGGC.CC..gggg....ggcagcg                                                                                         <  1:4252972/101‑7 (MQ=255)


              cGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..gggg....ggcagcg                                                                                         <  2:4139822/101‑7 (MQ=255)


              cGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..gggg....ggcagcg                                                                                         <  2:5599403/101‑7 (MQ=255)


               ggATGTGACTTTCGATGCCTCCGGCGGGGGTATTTTGG.GCAAGAAG.AAACCCAT.CCCTTTC.ATTTTTCCCC.CAATATCCCTGGGGGC.CC..cggg....gggagcgc                                                                                        >  2:4383686/1‑94 (MQ=25)


                gATGTGACTTTCGATGCCTCCGGCGGGGGAATTTTGG.GGAAAATG.AAACCCAT.CCCTTTT.CTCTTGCCCC.ACAAAATCCAGGGGGC.CC..gggg....gggagcgcc                                                                                       >  1:5743179/1‑93 (MQ=255)


                gATGTGACTTTCGATGCCTCCGGCGGGGATATTTTGG.GGAAGATG.AAAACCAT.CCCTTTC.ATCTTTCCCC.AAAAATCCCCGGGGGC.CC..GGGG....g.....g.g.....cgcgcc                                                                            >  1:3848056/1‑96 (MQ=25)


                gATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..gggg....ggcagcgcc                                                                                       <  1:284227/101‑9 (MQ=255)


                 aTGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..gggg....ggcagcgccc                                                                                      <  2:2521138/101‑10 (MQ=255)


                 aTGTGACTTTCGATGCCTCCGGCGGAGGTATTTTGG.GCAAAATG.AAAACCCA.CCCTTTT.ATTTTGTCCC.CAACATTCCCTGGGGC.CC..gggg....ggaggcgcgc                                                                                      >  2:2500935/1‑92 (MQ=12)


                  tgtgACTTTCGATGCCTCCGGCGGGGGTATTTTGG.GGAAAAAG.AAAACCAT.CCCCTTC.ATCTTTCCCC.CAAAATCCCCGGGGGC.CC..cggg....gggagcgcccc                                                                                     >  1:4382525/1‑91 (MQ=255)


                  tgtgACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCACGGGGGGC.CC..gggg....ggcagcggccc                                                                                     >  2:770959/1‑91 (MQ=25)


                               gCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCCCTTCCGc                                                                >  2:4822275/1‑101 (MQ=21)


                                 cTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCCCTTCCGccc                                                              >  2:4231720/1‑100 (MQ=21)


                                     gggggggATTTTTGGG.CAAAAATA.AACCCCAC.CCTTTTC.ATCTTCCCCC.AAATACCCGGGGGGGC.CG..GGGGGGCAG.....C.C.....C.CCCCCGCCACTTCCGCCACggg                                                          <  2:1306333/98‑1 (MQ=255)


                                     ggcggGGATATTTGGG.GGCAGATG.AAACCCAT.CCCTTTC.ATCTTTCCCC.AAATATCCCGGGGGGC.CC..GGGGGGGAG.....C.G.....G.CCCCCGCCACTTCCGcccccgg                                                          >  2:2713557/1‑96 (MQ=18)


                                      gcggGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACgggg                                                         >  2:3071109/1‑101 (MQ=25)


                                      gcggGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACgggg                                                         >  2:1862240/1‑101 (MQ=25)


                                        ggggATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCa                                                       >  1:1229041/1‑101 (MQ=21)


                                         gggATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAg                                                      >  2:4407411/1‑101 (MQ=25)


                                         gggATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAg                                                      >  1:4381489/1‑101 (MQ=25)


                                          gttattttGGGCGCAAGA.G.AAACCCCT.TCCCTTC.TTTTTGCCCCAAAATAACGGGGGGGGC.CG..GGGG....GGCAC.C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAg                                                      <  2:1712946/96‑1 (MQ=255)


                                          ggATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAgc                                                     >  1:467681/1‑101 (MQ=25)


                                            atatTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCaagat                                                   >  2:560875/1‑97 (MQ=21)


                                            atatTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAgcgc                                                   >  1:992936/1‑101 (MQ=21)


                                            atatTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAgcgc                                                   >  1:2166450/1‑101 (MQ=25)


                                            atatTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAgcgc                                                   >  1:2358908/1‑101 (MQ=25)


                                            atatTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAgcgc                                                   >  1:4160906/1‑101 (MQ=25)


                                              atTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGccc                                                 >  1:4120154/1‑101 (MQ=25)


                                               tttGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                >  1:3172914/1‑101 (MQ=21)


                                               ttgggg.gAAAGAAA.AACCCCAC.CCCTTTC.TTCTT.CCCC.AAAATCCCCGGGGGGC.CCGGGGGG....G.....C.GGCC..C.CCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                <  2:2420155/98‑1 (MQ=9)


                                                tgggg.gCAAAAAA.AACCCCCC.CCCTTTT.CTTTGGCCCC.AAAATCCCCGGGGGGC.CC..GGGG....GGGCACC.C.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGcccc                                                <  1:671015/99‑1 (MQ=255)


                                                 tGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                              >  1:2873733/1‑101 (MQ=21)


                                                  ggg.gCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGc                                             >  2:4392576/1‑101 (MQ=25)


                                                  ggg.gCAAAAAC.AAACCCNC.CCCTTTC.ATTCTCCCCC.AAATTGCCCGGGGGGC.CC..GGGG....GGGCCCC.C.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCgg                                              <  2:591026/101‑1 (MQ=255)


                                                   gg.gCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                            >  1:2686668/1‑101 (MQ=25)


                                                   gg.gCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGcc                                            >  2:5175968/1‑101 (MQ=25)


                                                        aaGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTg                                        >  1:4588419/1‑101 (MQ=25)


                                                           aTG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                     >  1:3306442/1‑101 (MQ=25)


                                                           aTG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACg                                     >  1:2051482/1‑101 (MQ=25)


                                                             g.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGaa                                   >  2:2616297/1‑101 (MQ=25)


                                                                aaCCCCC.CCCTTTC.CTTCTGCCCC.AAATTACCGGGGGGGG.CCGGGGGG....G.....C.GGCC..C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAg                                  <  2:3567942/101‑1 (MQ=255)


                                                                aaCCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAgg                                 >  2:3766623/1‑101 (MQ=25)


                                                                  cccAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag                               >  2:98616/1‑101 (MQ=25)


                                                                  cccAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGgag                               >  2:1524005/1‑101 (MQ=25)


                                                                    cAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGCGAc                             >  2:5327193/1‑101 (MQ=21)


                                                                    cAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                             >  2:630612/1‑101 (MQ=21)


                                                                    cAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                             >  1:1944186/1‑101 (MQ=25)


                                                                    cAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGAc                             >  1:622937/1‑101 (MQ=25)


                                                                         ccTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGGGACcgcg                         >  2:4136842/1‑101 (MQ=21)


                                                                         ccTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACcgcg                         >  2:852854/1‑101 (MQ=25)


                                                                            ttC.TTCTTGCCCC.AAATACCCGGGGGGGCGGG..GGGG....G.....CGG.....CGCCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGt                     <  2:1478627/101‑1 (MQ=255)


                                                                            ttC.GTCCTGCCCC.AAATCCCCGGGGGGGC.GC..GGGG....G.....G.GCCCCCC.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGAt                       <  2:259130/101‑1 (MQ=255)


                                                                            ttC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                      >  2:372539/1‑101 (MQ=25)


                                                                            ttC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATg                      >  2:4813007/1‑101 (MQ=25)


                                                                              c.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                    >  1:2800620/1‑101 (MQ=25)


                                                                              c.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGtt                    >  1:3555158/1‑101 (MQ=25)


                                                                                aTCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGttt                   >  2:902808/1‑101 (MQ=25)


                                                                                  cTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                 >  1:1453035/1‑101 (MQ=25)


                                                                                  cTTGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCa                 >  2:2435837/1‑101 (MQ=25)


                                                                                    tGCCCC.AAATTCCCGGGGGGGG.CC..GGGG....GGC...C.GCCC..C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaa                <  2:4529799/101‑1 (MQ=255)


                                                                                    tGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCTGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa               >  1:5005550/1‑101 (MQ=25)


                                                                                    tGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa               >  1:3550492/1‑101 (MQ=25)


                                                                                    tGCCCC.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCaaa               >  1:5701210/1‑101 (MQ=25)


                                                                                       ccc.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGa            >  1:4020112/1‑101 (MQ=25)


                                                                                       ccc.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGa            >  2:214927/1‑101 (MQ=25)


                                                                                       ccc.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGa            >  2:862239/1‑101 (MQ=25)


                                                                                         c.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc          >  1:3837554/1‑101 (MQ=25)


                                                                                         c.AAATATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATc          >  2:4042248/1‑101 (MQ=25)


                                                                                          caaaatccccGGGGGGC.CCGGGGGG....G.....C.GCCC..C.CCCCCGCCACGTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGAt           <  1:1691568/94‑1 (MQ=255)


                                                                                           aaaTATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATcc         >  1:3357683/1‑101 (MQ=25)


                                                                                            aaTATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt        >  1:2638362/1‑101 (MQ=25)


                                                                                            aaTATCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCt        >  2:1656747/1‑101 (MQ=25)


                                                                                               atCCCGGGGGGC.CC..GGGGGGGAG.....C.G.....C.CCCCCCCCCCCTTCGCCACCGGGGAGCGCCCCGGCCCGTGACGAAGGAGGACGCGATGTTTCAAAAAATACTGAt     >  2:4856727/1‑101 (MQ=12)


                                                                                               atCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt     >  2:4378264/1‑101 (MQ=37)


                                                                                               atCCCGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGAt     >  1:5129836/1‑101 (MQ=37)


                                                                                                 cccGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCg   >  2:1735904/1‑101 (MQ=37)


                                                                                                 cccGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCg   >  1:5287381/1‑101 (MQ=37)


                                                                                                  ccGGGGGGC.CC..GGGGGGCAG.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGc  >  2:3645167/1‑101 (MQ=37)


GCTTCGGGATCTTCCGGATGTGACTTTCGATGCCTCCGGCGGGGATATTTGGG.GCAAGATG.AAACCCAT.CCCTTTC.ATCTTGCCCC.AAATATCCCGGGGGGC.CC..GGGG....G.....C.G.....C.CCCCCGCCACTTCCGCCACGGGGCAGCGCCCCGGCCGTTGACGAAGGAGACCGCGATGTTTCAAAAGATCCTGATCGC  >  NC_014034/1639898‑1640087

Base quality scores:


ATCG

< 3 ≤


ATCG

< 18 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 41 ≤


ATCG