BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	408498 =	24 (0.110)	93 (0.430)	28/148	18.1	0.57	intergenic (+116/+32)	glnA1/dapA	glutamine synthetase/dihydrodipicolinate synthase
*	?	NC_014034	= 1748566	114 (0.390)	93 (0.430)	28/148	18.1	0.57	intergenic (‑270/‑128)	RCAP_rcc01616/gppA	hypothetical protein/guanosine‑5'‑triphosphate,3'‑diphosphate pyrophosphatase
Rejected: Position hash score below cutoff.

Only 100 of 173 total aligned reads displayed.


CCCGGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.GGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTAG  >  NC_014034/1748466‑1748665


cccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGc                                                                                                            <  1:2731477/101‑1 (MQ=255)


 ccgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGcc                                                                                                           >  2:4813345/1‑101 (MQ=255)


  cgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCg                                                                                                          <  2:1421363/101‑1 (MQ=255)


  cgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCg                                                                                                          <  2:3519899/101‑1 (MQ=255)


  cgGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCACCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCg                                                                                                          >  2:170531/1‑101 (MQ=255)


   ggTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGATGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGGCGc                                                                                                         >  2:1915089/1‑101 (MQ=255)


   ggTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGCGGCCGc                                                                                                         >  2:699634/1‑101 (MQ=255)


   ggTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGc                                                                                                         >  1:3430661/1‑101 (MQ=255)


   ggTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGc                                                                                                         >  1:142110/1‑101 (MQ=255)


   ggTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGc                                                                                                         <  1:2300943/101‑1 (MQ=255)


    gTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCa                                                                                                        >  1:723549/1‑101 (MQ=255)


    gTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCa                                                                                                        >  2:19345/1‑101 (MQ=255)


      cgacTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.gg                                                                                                     >  1:3298837/4‑101 (MQ=255)


      cGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.gg                                                                                                     >  2:251585/1‑101 (MQ=255)


      cGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.gg                                                                                                     <  2:275080/101‑1 (MQ=255)


       gCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGc                                                                                                    >  2:168757/1‑101 (MQ=255)


       gCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGc                                                                                                    <  2:1263691/101‑1 (MQ=255)


          ttGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.g                                                                                               <  2:2113783/101‑1 (MQ=255)


          ttGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.g                                                                                               <  1:4137289/101‑1 (MQ=255)


          ttGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.g                                                                                               >  1:186118/1‑101 (MQ=255)


          ttGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.g                                                                                               <  1:3120619/101‑1 (MQ=255)


             cccTGCGCGGCGGAGCCTCCGGCGGAGGGATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.ggg.g                                                                                           >  2:5695654/1‑101 (MQ=255)


              ccTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.ggg.gg                                                                                          <  1:2496055/101‑1 (MQ=255)


              ccTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.ggg.gg                                                                                          <  2:322473/101‑1 (MQ=255)


              ccTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.ggg.gg                                                                                          >  1:581465/1‑101 (MQ=255)


               cTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.ggg.ggg                                                                                         >  2:3561414/1‑100 (MQ=255)


                 gcgcGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.ggg.gggca                                                                                       <  1:1232877/101‑4 (MQ=255)


                 gcgcGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.ggg.gggca                                                                                       <  2:3612986/101‑4 (MQ=255)


                   gcggggGAGCCTCCGGCGGAGGTATTTGGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCGGGGGGGAGGCCGCA.GGCC.C.ggg.gggcagc                                                                                     <  2:102113/101‑6 (MQ=25)


                   gcggcgGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.ggg.gggcagc                                                                                     >  1:5254429/1‑96 (MQ=255)


                   gcggcgGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.ggg.gggcagc                                                                                     >  2:4678251/1‑96 (MQ=255)


                      gcggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGcc                                                                                 <  2:3410795/101‑1 (MQ=255)


                       cggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGccc                                                                                <  1:3087652/101‑1 (MQ=255)


                       cggAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGccc                                                                                >  2:2988195/1‑101 (MQ=255)


                         gAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CCG.CGccc.cc                                                                             >  2:45548/1‑101 (MQ=255)


                         gAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGccc.cc                                                                             >  1:2227851/1‑101 (MQ=255)


                            ccTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGc                                                                          >  1:5472249/1‑101 (MQ=255)


                              tCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCt                                                                        >  1:5673227/1‑101 (MQ=255)


                                  gcggAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CCG.CGCCC.CCCGCCTTGCt                                                                    >  1:3811716/1‑101 (MQ=255)


                                    ggAGTTTTTGAGGGAAAGATGAACGGGCCCCCCTTCTTCTTCCCTAAAATACCCGGGGGGGGGCCCGCG.GCCCGG.GGG.GG.CGG.CCCCC.CCCGCCTTGCTTc                                                                  <  2:5594647/101‑1 (MQ=255)


                                      aGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCgg                                                                >  2:3979273/1‑101 (MQ=255)


                                       ggTATTTAGGGCCAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.GAG.CGCCC.CCCCCCCTGCTTCGGc                                                               >  1:3133008/1‑101 (MQ=25)


                                         tATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCt                                                             >  2:5093380/1‑101 (MQ=255)


                                           tttAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTg                                                           >  2:3720479/1‑101 (MQ=255)


                                             tAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.GAG.GGCCC.CCCCCCCTGCCTCCGCCTTGCg                                                         >  1:1101932/1‑101 (MQ=25)


                                              aGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.GAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCgc                                                        >  1:2663159/1‑100 (MQ=255)


                                              aGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCgc                                                        >  1:1351076/1‑100 (MQ=255)


                                               gggCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGAc                                                       >  1:1164519/1‑101 (MQ=255)


                                                 gCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGt                                                     >  1:4325240/1‑101 (MQ=255)


                                                  aaaGATGAACCGGTCCCCCTTCTTCTTCCCAAAAATCCCGGGGGGGGGGGCCGGG.GCCC.G.GGG.GGCCCC.CCCCC.CCCGCCTTGCTTCGGCCTTGCGACGTc                                                    <  2:3450054/100‑1 (MQ=255)


                                                    ataTGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCAc                                                  >  1:883573/3‑101 (MQ=255)


                                                    aGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CGG.CGCCC.CCCCCCCTGCTTCGGCCCTCCGACGCCAc                                                  >  1:5021916/1‑101 (MQ=25)


                                                    aGAGGAAACGGCCCCCCTTCCTTTCCCCAAAAATGCCCGGGGGGGGGGCCGCG.GGCCGG.GGG.GG.CCC.CCCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCAc                                                  <  2:3899238/101‑1 (MQ=255)


                                                       tGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGaa                                               >  1:3381551/1‑101 (MQ=255)


                                                          aaCGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACtt                                            >  1:5478675/1‑101 (MQ=255)


                                                            cGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.GAG.GGCCC.CCCGCCTTGCTTCGGGCTTGCGACGTCACTGACTTGt                                          >  2:1903921/1‑101 (MQ=25)


                                                            cGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCCTGCTTCGGCCTTGCGACGTCACGAACttct                                          >  2:2902146/1‑99 (MQ=255)


                                                               tGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCAt                                       >  1:3828362/1‑101 (MQ=255)


                                                               tGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCAt                                       >  2:3484538/1‑101 (MQ=255)


                                                               tGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCCCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCAt                                       >  1:2919121/1‑101 (MQ=255)


                                                                cccccTTCCTTTCGCATAAAATACCCGGGGGGGGCGCCGCG.GGCC.G.GGG.GGCCCC.CCCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATc                                      <  2:3430456/100‑1 (MQ=255)


                                                                  cccTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.GAG.CGCCC.CCCGCCTTGCTTCGGCCCTGCGACCGCACGAACTTGTCATCgg                                    >  1:1201725/1‑101 (MQ=25)


                                                                  cccTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCgg                                    >  2:1960507/1‑101 (MQ=255)


                                                                   ccTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCggg                                   >  1:1467103/1‑101 (MQ=255)


                                                                     ttCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgcg                                 >  2:636788/1‑101 (MQ=255)


                                                                     ttCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgcg                                 >  2:2309970/1‑101 (MQ=255)


                                                                     ttCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgcg                                 >  2:709645/1‑101 (MQ=255)


                                                                     ttCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgcc                                 >  2:2198453/1‑100 (MQ=255)


                                                                      tCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGgcgc                                >  2:423627/1‑101 (MQ=255)


                                                                      tCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.GGGCGG.CAG.CGCCC.CCCGCCTTGATTCGGCCTTGCGACGTCACGAACTTGTCATCGGgcgc                                >  1:4952742/1‑101 (MQ=255)


                                                                       cATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCCCGAACTTGTCAGAGGGAGCt                               >  2:767799/1‑101 (MQ=25)


                                                                          cTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGa                            >  2:5765846/1‑101 (MQ=255)


                                                                          cTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGa                            >  1:1700834/1‑101 (MQ=255)


                                                                              ccaaaaacctCCGGGGGGGCGCCCGCG.GGCC.G.GGG.GGCCCC.CCCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCt                        <  2:5687296/92‑1 (MQ=255)


                                                                                tCAAATATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTc                      >  1:4810983/1‑101 (MQ=255)


                                                                                 caaacgccccGGGGGGGGGCCCCAGGGCC.G.GGG.GG.CCGCCCCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTc                      <  2:1456891/94‑1 (MQ=255)


                                                                                 aaaatggccgggggggGGGCCGCG.GGCCGG.GGG.GG.CAG.CCCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCg                     <  1:3561631/91‑1 (MQ=255)


                                                                                  aatcccccgggggggGGGCGGCG.GGCC.G.GGG.GG.CCGCCCCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCgg                    <  2:5471959/92‑1 (MQ=255)


                                                                                  aaaTATCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCgg                    >  1:4633964/1‑101 (MQ=255)


                                                                                   aaccagccGGGGGGAGGGCCCC.GGCCGG.GGG.GG.CCC.CCCCCGCCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCgg                    <  1:1915198/95‑1 (MQ=255)


                                                                                     tatCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccc                 >  2:2000539/1‑101 (MQ=255)


                                                                                     tatCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccc                 >  1:1796431/1‑101 (MQ=255)


                                                                                      atCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccc                >  1:812132/1‑101 (MQ=255)


                                                                                      atCCCGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccc                >  1:5007185/1‑101 (MQ=255)


                                                                                        cccGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccccc              >  2:5039808/1‑101 (MQ=255)


                                                                                        cccGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGcccccc              >  1:1075554/1‑101 (MQ=255)


                                                                                         ccGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGccccccc             >  1:2678560/1‑101 (MQ=255)


                                                                                          cGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcg            >  2:4785047/1‑101 (MQ=255)


                                                                                          cGGGGGGAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcg            >  1:2328962/1‑101 (MQ=255)


                                                                                           ggggggAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcgc           >  2:2265124/1‑101 (MQ=255)


                                                                                           ggggggAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcgc           >  2:1137130/1‑101 (MQ=255)


                                                                                            gggggAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcgcg          >  2:4187632/1‑101 (MQ=255)


                                                                                            gggggAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGGCACCAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCcgcc          >  2:5179374/1‑100 (MQ=255)


                                                                                             ggggAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCgcgc         >  2:4017025/1‑101 (MQ=255)


                                                                                             ggggAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCgcgc         >  2:3811745/1‑101 (MQ=255)


                                                                                              gggAGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCt        >  1:4702646/1‑101 (MQ=255)


                                                                                                 aGGCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTAcc     >  2:92216/1‑101 (MQ=255)


                                                                                                  ggCCGCA.GGCC.CGGGG.GG.CAG.CGCAC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCt    <  1:170551/101‑1 (MQ=255)


                                                                                                   gCCGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCCTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCCGCCCCCCCCCGCCAccca   >  1:3940056/1‑99 (MQ=38)


                                                                                                    ccGCA.GGCC.CGGGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTAg  >  2:1214020/1‑101 (MQ=255)


CCCGGTCGCCTTGCCCTGCGCGGCGGAGCCTCCGGCGGAGGTATTTAGGGCAAGATGAAACGGTGCCCCTTCATCTTGCCTCAAATATCCCGGGGGGAGGCCGCA.GGCC.C.GGG.GG.CAG.CGCCC.CCCGCCTTGCTTCGGCCTTGCGACGTCACGAACTTGTCATCGGGCGCTTGAACCTTCGGCCCCCCCGCGCTACCTAG  >  NC_014034/1748466‑1748665

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG