New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 408498 =31 (0.140)86 (0.400) 23/148 20.7 0.41 intergenic (+116/+32) glnA1/dapA glutamine synthetase/dihydrodipicolinate synthase
?NC_014034 = 2941053 217 (0.740)intergenic (‑716/+27) RCAP_rcc02750/RCAP_rcc02751 hypothetical protein/N‑acetylmuramoyl‑L‑alanine amidase, family 2
Rejected: Position hash score below cutoff.

Only 100 of 290 total aligned reads displayed.

TCAATGGGGGCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCAATGTCGGTGG  >  NC_014034/2940953‑2941153
                                                                                                    |                                                                                                     
tCAATGGGGGCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGgc                                                                                                       <  1:147218/101‑1 (MQ=255)
 cAATGGGGGCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGgcg                                                                                                      <  1:3211796/101‑1 (MQ=255)
 cAATGGGGGCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGgcg                                                                                                      <  2:467495/101‑1 (MQ=255)
 cAATGGGGGCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGgcg                                                                                                      <  2:1783234/101‑1 (MQ=255)
 cAATGGGGGCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGgcg                                                                                                      >  2:2667064/1‑101 (MQ=255)
 cAATGGGGGCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGgcg                                                                                                      >  2:2839370/1‑101 (MQ=255)
  aaTGGGGGCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGgcgc                                                                                                     <  1:1138128/101‑1 (MQ=255)
  aaTGGGGGCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGgcgc                                                                                                     <  2:1012500/101‑1 (MQ=255)
     gggggCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGc                                                                                                  >  1:964524/1‑101 (MQ=255)
      ggggCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGcc                                                                                                 <  2:86871/101‑1 (MQ=255)
      ggggCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGcc                                                                                                 <  2:3755634/101‑1 (MQ=255)
        ggCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCgg                                                                                               <  2:5135503/101‑1 (MQ=255)
         gCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCggg                                                                                              >  2:736860/1‑101 (MQ=255)
            ctGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCgggggg                                                                                           >  1:2252631/1‑101 (MQ=255)
             tGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGc                                                                                          >  2:2466298/1‑101 (MQ=255)
             tGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGc                                                                                          >  1:5414244/1‑101 (MQ=255)
             tGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGc                                                                                          >  2:492125/1‑101 (MQ=255)
               cccccATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.ag                                                                                       >  2:3961845/1‑101 (MQ=255)
               cccccATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.ag                                                                                       <  1:5222903/101‑1 (MQ=255)
                ccccATTCCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.aga                                                                                      <  1:3754951/101‑1 (MQ=255)
                 cccATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.agag                                                                                     >  1:4412171/1‑101 (MQ=255)
                   cATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGcc                                                                                   >  1:430385/1‑101 (MQ=255)
                     tACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGcccc                                                                                 >  1:4483054/1‑101 (MQ=255)
                      aCCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGTTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGccccc                                                                                <  2:312121/101‑1 (MQ=255)
                         cccGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCcctc                                                                             <  2:565062/101‑1 (MQ=255)
                            gggATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCctcctc                                                                          >  1:1008758/1‑101 (MQ=255)
                            gggATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCctcctc                                                                          <  2:2616962/101‑1 (MQ=255)
                            gggATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCctcctc                                                                          >  1:1357740/1‑101 (MQ=255)
                             ggATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCa                                                                         <  1:1108605/101‑1 (MQ=255)
                              gATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCaa                                                                        >  2:4035200/1‑101 (MQ=255)
                               atatTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAAc                                                                       >  1:4689423/1‑101 (MQ=255)
                               atatTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAAc                                                                       >  1:5630133/1‑101 (MQ=255)
                               atatTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCCCCTCAAc                                                                       >  1:948040/1‑101 (MQ=255)
                                tatTTGGAGCAAGATGAAGGGAAGGCCGGTTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACt                                                                      <  1:2360892/101‑1 (MQ=255)
                                tatTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACt                                                                      >  1:2444183/1‑101 (MQ=255)
                                tatTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACt                                                                      >  1:2423615/1‑101 (MQ=255)
                                tatTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACt                                                                      <  2:3881925/101‑1 (MQ=255)
                                 atTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTg                                                                     >  1:3098266/1‑101 (MQ=255)
                                    tGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGcc                                                                  >  1:4852341/1‑101 (MQ=255)
                                     ggAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGccc                                                                 <  2:702571/101‑1 (MQ=255)
                                     ggAGCAAGATGAAGGAAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCGCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGccc                                                                 <  2:1908410/101‑1 (MQ=255)
                                      gAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCg                                                                >  2:4494221/1‑101 (MQ=255)
                                         cAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCa                                                             <  1:3420756/101‑1 (MQ=255)
                                          aaGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAg                                                            <  1:3492958/101‑1 (MQ=255)
                                          aaGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAg                                                            <  2:1410746/101‑1 (MQ=255)
                                          aaGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAg                                                            >  2:1143788/1‑101 (MQ=255)
                                            gATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGgc                                                          >  2:5382569/1‑101 (MQ=255)
                                               gaagggaaggCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGcgcc                                                       >  2:1201542/1‑101 (MQ=255)
                                                aagggaaggCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGcgccg                                                      >  1:2077863/1‑101 (MQ=255)
                                                aagggaaggCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGcgccg                                                      >  2:780260/1‑101 (MQ=255)
                                                aagggaaggCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGcgccg                                                      <  1:5767053/101‑1 (MQ=255)
                                                 agggaaggCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGcgccgc                                                     >  2:4590211/1‑101 (MQ=255)
                                                    gaaggCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGt                                                  >  1:4587853/1‑101 (MQ=255)
                                                    gaaggCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGt                                                  >  1:168391/1‑101 (MQ=255)
                                                    gaaggCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGt                                                  >  2:1970336/1‑101 (MQ=255)
                                                     aaggCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTc                                                 >  2:3585172/1‑101 (MQ=255)
                                                     aaggCCGGGTTTGCCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGCGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTc                                                 <  2:3218932/101‑1 (MQ=255)
                                                        gCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGa                                              >  2:1518648/1‑101 (MQ=255)
                                                        gCCGGGTGGGGCTGGCACCTGGCGGGAAATAGCCCGGGGGGAGGCGCAGCCGGGGGGC.AGGGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGa                                              <  1:285864/101‑1 (MQ=255)
                                                         ccGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAg                                             >  2:2779545/1‑101 (MQ=255)
                                                          cGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGc                                            >  1:908598/1‑101 (MQ=255)
                                                          cGGGTTTGGCTTTCATCGTGCCGGAAATAGCGCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGc                                            <  1:1868952/101‑1 (MQ=255)
                                                            ggTTTGCCTTTCATCTTGCCGGAAATACCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCg                                          <  2:3689401/101‑1 (MQ=255)
                                                              tttGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGaa                                        >  1:3544030/1‑101 (MQ=255)
                                                               ttGTCTTTCATCTTGCGGGAAATATCCGGGGGGGAGGCGCCGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAg                                       <  2:3461707/101‑1 (MQ=255)
                                                               ttGGCTTTCATCTTGCCGGAAATATCCCGGGGGGCGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAg                                       >  2:1355874/1‑101 (MQ=255)
                                                                tGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGCCAGAGCCGAAgc                                      >  2:2417276/1‑101 (MQ=255)
                                                                 ggCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAgcg                                     >  2:4737864/1‑101 (MQ=255)
                                                                 ggCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGGCCGAGCCGAAgcg                                     >  2:185543/1‑101 (MQ=255)
                                                                    tttCATCTTGCCGTAAATATCCCGGGGGGAGGCGCAGCCGGGGGGA.AAAGCCCCCCTCCTCAACTGCCCCGCCAGGCGCCGCCGGCCGAGCCGAAGCGCaa                                  >  1:3863677/1‑101 (MQ=38)
                                                                     ttCATCTGGCCGGAAATATCCCGGGGGCAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAg                                 <  2:4345799/101‑1 (MQ=255)
                                                                      tCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAgg                                >  2:3326345/1‑101 (MQ=255)
                                                                       cATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGc                               >  1:2650450/1‑101 (MQ=255)
                                                                        aTCTGGCCGGAAATACCCGGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGcc                              <  1:2489999/101‑1 (MQ=255)
                                                                         tCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCa                             >  1:5014409/1‑101 (MQ=255)
                                                                         ccTTGCCGGAAATACCCGGGGGGGGGGCGCAGCGGGGGGCC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCa                             <  2:550213/100‑1 (MQ=255)
                                                                          cTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAg                            >  1:673666/1‑101 (MQ=255)
                                                                           ttGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGa                           >  2:211482/1‑101 (MQ=255)
                                                                           ttGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGa                           >  2:155380/1‑101 (MQ=255)
                                                                           ttGCCGGAAATACCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGa                           <  1:3595945/101‑1 (MQ=255)
                                                                              cccaaaatcccccGGGGGGGGGCGCCGCCGGGGGGCTAACCCCCCCCTCCTCATCTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATc                         <  2:910524/91‑1 (MQ=255)
                                                                                ggAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGCCCGAGCCGAAGCGCAAGGCCAGACCGtt                      >  2:5365594/1‑101 (MQ=255)
                                                                                   aaTATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGat                   >  1:5690948/1‑101 (MQ=255)
                                                                                   aaTATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATAGTTGat                   >  2:3386926/1‑101 (MQ=255)
                                                                                    atatCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGatc                  >  2:5271302/1‑101 (MQ=255)
                                                                                    atacCCCGGGGGGGGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGatc                  <  1:595286/101‑1 (MQ=255)
                                                                                    atacCCCGGGGGGAGGCGCAGCGGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGatc                  <  2:3146294/101‑1 (MQ=255)
                                                                                     tatCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGatca                 >  1:39479/1‑101 (MQ=255)
                                                                                      acccgggggggGGGCGCGGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGatcat                <  2:4197504/96‑1 (MQ=255)
                                                                                        cccGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCg              >  1:5123166/1‑101 (MQ=255)
                                                                                         ccGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGc             >  2:2988742/1‑101 (MQ=255)
                                                                                          gggggggAGGCGCGGCCGGGGGGC.AGACCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCa            <  2:577740/100‑1 (MQ=255)
                                                                                          cGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCa            >  1:1255375/1‑101 (MQ=255)
                                                                                           ggggggAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCaa           >  1:897317/1‑101 (MQ=255)
                                                                                            gggggAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCAAt          >  1:4120856/1‑101 (MQ=255)
                                                                                              gggAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCAATGt        >  2:2915345/1‑101 (MQ=255)
                                                                                                gAGGCGCAGCGGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCAATGTCg      <  2:440573/101‑1 (MQ=255)
                                                                                                 aGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCAATGTCgg     >  2:4309221/1‑101 (MQ=255)
                                                                                                  ggCGCGGCGGGGGGGC.AGACCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCAATGTCGGt    <  1:808895/101‑1 (MQ=255)
                                                                                                   gcgcAGCCGGGGGGC.AGCGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCAATGTCGGTg   <  1:695725/101‑1 (MQ=255)
                                                                                                    |                                                                                                     
TCAATGGGGGCTCTGCCCCCATACCCCCGGGATATTTGGAGCAAGATGAAGGGAAGGCCGGGTTTGGCTTTCATCTTGCCGGAAATATCCCGGGGGGAGGCGCAGCCGGGGGGC.AGAGCCCCCCTCCTCAACTGGCCCGCCAGGCGCCGCCGTCCGAGCCGAAGCGCAAGGCCAGATCGTTGATCATCGCAATGTCGGTGG  >  NC_014034/2940953‑2941153

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG