| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,533 | T→A | 20.9% | intergenic (+345/‑586) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,533 | 0 | T→A | 20.9% | 230.7 ‑3.3 ‑1.6 | 410 | intergenic (+345/‑586) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (46/29): ref base (136/149): total (207/203) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.85e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.51e-02 | ||||||||||
Only 100 of 474 total aligned reads displayed.
GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCG > NC_014034/1395433‑1395633
|
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctt > 2:4804208/1‑100 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAtct > 2:1560552/1‑101 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAtct < 2:5773985/101‑1 (MQ=255)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgcttt > 1:3670604/1‑99 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAtctc > 1:5623428/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctttc > 2:4703055/1‑98 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCg < 2:5632324/101‑1 (MQ=255)
cTCCCCCCGGGGGGGCGTGGATCGAAACATCGCCGCTTTGGGGGGCGACAGGCTGGTAACGTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAtctccg < 2:4125728/101‑3 (MQ=37)
cTCCCCCCGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctttca > 1:985534/1‑97 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCg.gg > 2:3501322/1‑100 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTg > 2:2870188/1‑101 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctttcaatg < 2:2081577/101‑8 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctttcaatgg < 2:5556127/101‑9 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGcc > 1:3170801/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCg < 2:4739575/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCg > 2:1363716/1‑101 (MQ=255)
cgcgGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTc < 2:3397558/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCACCGCGGGGGCGTGGATCGAAACATCTCG.GTGCGGTCg > 1:5560049/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGc > 1:2720527/1‑101 (MQ=255)
gggggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGcc > 1:4016905/1‑100 (MQ=255)
gggggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCt > 1:1151582/1‑101 (MQ=255)
ggggCGTTGATCGAAACATCGCCGCTTTGGGGGTCGACAGGCTGGTAACGTGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTc < 1:5436768/101‑1 (MQ=255)
gcggCGTGGATCGAACCATCGCCACTATGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTc < 2:2649431/99‑1 (MQ=255)
gggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCg < 1:1300119/101‑1 (MQ=255)
ggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.t < 2:4504263/101‑1 (MQ=255)
ggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.t > 1:3377459/1‑101 (MQ=255)
ggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.t > 2:2451526/1‑101 (MQ=255)
cGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGTATGCCGTcttctgct > 1:5293820/1‑94 (MQ=37)
ggATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGc < 2:4554082/101‑1 (MQ=255)
gAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.cc > 1:1483847/1‑101 (MQ=255)
aaaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCt > 1:2834114/1‑101 (MQ=255)
aaaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCt > 2:2234151/1‑101 (MQ=255)
aactgcgccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCGCCCCCCGCGGGGGCGTGGATCGCAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.g < 2:1277447/96‑1 (MQ=255)
aaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.g < 1:1326460/101‑1 (MQ=255)
cgccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCtcgt < 1:3501539/101‑1 (MQ=255)
gccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCtcgtc > 1:4592800/1‑101 (MQ=255)
ccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCtcgtcg > 1:3349507/1‑101 (MQ=255)
cTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTc < 2:2944359/101‑1 (MQ=255)
tttGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTcc < 1:2138662/101‑1 (MQ=255)
ggCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTccccc < 1:3578388/101‑1 (MQ=255)
gCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTcccccc < 1:5053436/101‑1 (MQ=255)
cGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCggg < 1:2234273/101‑1 (MQ=255)
gACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCgggg > 1:1699998/1‑101 (MQ=255)
gACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCgggg < 1:5153307/101‑1 (MQ=255)
aCAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCggggg < 2:3641430/101‑1 (MQ=255)
cAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGc < 1:2870349/101‑1 (MQ=255)
ccggTACCGCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACATCGAT.GATCAAATCCTCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTg < 1:4350015/99‑1 (MQ=2)
cTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTAGCTCG.TCCAGCCGG.CCT.GATCGTCGCTCCCCCCCCGGGGGCGTgg > 1:4866181/1‑101 (MQ=255)
agcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTgg > 2:3034590/11‑101 (MQ=0)
aggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGa < 1:2499469/92‑1 (MQ=0)
ggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:2458198/93‑1 (MQ=2)
ggTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGAt > 2:1060318/1‑101 (MQ=255)
gTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:464786/101‑1 (MQ=255)
tgccgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGAT.GATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:827328/95‑1 (MQ=2)
tAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:611848/1‑101 (MQ=255)
ggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:3473522/5‑101 (MQ=2)
cacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:5455354/4‑101 (MQ=2)
cacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:654011/98‑1 (MQ=2)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:5019911/101‑1 (MQ=255)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:1877176/101‑1 (MQ=255)
tgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacc > 2:4372877/1‑101 (MQ=255)
ggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacc < 2:149606/100‑1 (MQ=2)
cgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAact < 2:1758998/100‑2 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacca > 1:847506/1‑101 (MQ=255)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccc > 1:2968089/1‑100 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGTGCGTGGATCGAAacccc > 1:682591/1‑99 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacccc < 2:3970681/101‑3 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacccc < 1:767547/101‑3 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCACGCGGGGGCGTGGCTCGCAacacc > 2:2036539/1‑98 (MQ=0)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCCTGGATCGAAACCACCt > 2:5231980/1‑101 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgt < 1:471534/101‑6 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGGCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgt > 2:2333436/1‑96 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgc > 1:4472075/1‑97 (MQ=2)
ccccccgGCGGGGGCGGGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgc < 1:2411658/100‑8 (MQ=0)
ccccccGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCttcc > 2:4918852/1‑99 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgcg < 1:262140/101‑9 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctgg > 2:4085895/1‑93 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcgccg > 2:766770/1‑93 (MQ=0)
cccccGCGCGGGCTTGGGTCGAAGCGTCTCG.ATGCCGTCGCCCT.TCCAGCCGG.CCT.GCTGGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCg < 2:5293530/101‑1 (MQ=25)
cccgGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgcgcg < 2:1691699/101‑11 (MQ=0)
ccccGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggcgt < 1:3755437/101‑10 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctggct > 2:1168536/1‑91 (MQ=2)
cccGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGa < 2:1983109/101‑1 (MQ=255)
gggggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTc > 2:2557926/1‑101 (MQ=255)
gggggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTc > 2:1854467/1‑101 (MQ=255)
ggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACt > 2:3776007/1‑101 (MQ=255)
ggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACt > 1:2204582/1‑101 (MQ=255)
ggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCC.TCCCGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACt < 1:4954920/101‑1 (MQ=255)
gCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACtt < 1:4165263/101‑1 (MQ=255)
gCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACtt < 1:2300608/101‑1 (MQ=255)
gCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACtt < 1:1006253/101‑1 (MQ=255)
ggATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTcgc > 2:5073312/1‑101 (MQ=255)
ggATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCAATTTcgc > 1:1564393/1‑101 (MQ=255)
cGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCgggg > 1:4664472/1‑101 (MQ=255)
cGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCgggg < 1:391367/101‑1 (MQ=255)
aaaCATTTCG.CTGCCCTGGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCCCCTTGCGGATTGTCACTTTCGCGGGGCg < 2:2792827/101‑1 (MQ=37)
aaaCATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCg < 2:431107/101‑1 (MQ=255)
aCATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGaa < 1:2055132/101‑1 (MQ=255)
aCATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGaa < 2:92620/101‑1 (MQ=255)
tctcG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCg < 1:1087997/101‑1 (MQ=255)
|
GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCG > NC_014034/1395433‑1395633
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 39 ≤
ATCG
|