| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,534 | C→T | 12.8% | intergenic (+346/‑585) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,534 | 0 | C→T | 12.8% | 125.9 ‑3.0 ‑0.0 | 410 | intergenic (+346/‑585) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (32/18): ref base (161/174): total (207/203) | ||||||||||
| Fisher's exact test strand distribution p-value = 4.79e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.93e-01 | ||||||||||
Only 100 of 476 total aligned reads displayed.
GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGT > NC_014034/1395434‑1395634
|
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAtc < 1:2233177/101‑1 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAtct < 2:5773985/101‑1 (MQ=255)
gCTCCCCCCGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctttc > 2:4703055/1‑98 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCg < 2:5235566/101‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCg.g > 2:228094/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctttcaa > 1:5565866/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctttcaa > 1:3481832/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctttcaa < 1:2861075/101‑6 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctttcaat > 2:4824836/1‑95 (MQ=0)
ccccccGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTg > 2:2870188/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTACACCGGGGCTCTGGTC.ACGGTTTGGGACGGAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAgctttcaatgg > 1:330935/1‑93 (MQ=2)
ccccGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGcc < 1:2130432/101‑1 (MQ=255)
gggggCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCt < 2:2649798/101‑1 (MQ=255)
cGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCGTATGCCGTcttctgct > 1:5293820/1‑94 (MQ=37)
tGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAg < 1:2684305/101‑1 (MQ=255)
tGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GCGCCGTCGCTCG.Tcccg > 1:92631/1‑99 (MQ=255)
aTCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCg < 1:3367757/101‑1 (MQ=255)
aTCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCg > 2:4954639/1‑101 (MQ=255)
tCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCgg > 1:440305/1‑101 (MQ=255)
cGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGGCGG.c > 2:2159965/1‑101 (MQ=255)
cGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.c > 1:1967391/1‑101 (MQ=255)
gAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.cc > 1:1663205/1‑101 (MQ=255)
aaaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCt > 1:5465414/1‑101 (MQ=255)
aaaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCt > 1:2930073/1‑101 (MQ=255)
aaaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCt < 2:4106099/101‑1 (MQ=255)
aaaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCt > 1:3841906/1‑101 (MQ=255)
aaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.g < 1:3062437/101‑1 (MQ=255)
aaCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.g < 1:1326460/101‑1 (MQ=255)
aCATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCCGCCGG.CCT.Gc > 1:3661510/1‑101 (MQ=255)
cATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCt > 1:1446338/1‑101 (MQ=255)
aTCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.Gccc > 2:2955141/1‑99 (MQ=255)
gccgcTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCtcgtc < 1:2747905/101‑1 (MQ=255)
tGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTcccc > 1:4325602/1‑101 (MQ=255)
gTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCcgcg < 2:4555794/101‑1 (MQ=255)
cGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCggg > 1:353716/1‑101 (MQ=255)
aCAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCggggg < 2:3641430/101‑1 (MQ=255)
aGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCg > 2:5664604/1‑101 (MQ=255)
ggCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGt < 1:4003006/101‑1 (MQ=255)
gccctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTgg < 2:173591/91‑1 (MQ=0)
cTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTgg < 1:801505/101‑1 (MQ=255)
cTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTAGCTCG.TCCAGCCGG.CCT.GATCGTCGCTCCCCCCCCGGGGGCGTgg > 1:4866181/1‑101 (MQ=255)
agcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTgg < 2:4320169/91‑1 (MQ=0)
agcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTgg > 2:3034590/11‑101 (MQ=0)
tGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGa < 1:515667/101‑1 (MQ=255)
gcggctgcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGa < 2:530237/92‑1 (MQ=0)
ccctcgcacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGa > 1:572157/10‑101 (MQ=2)
aggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGa > 2:204898/10‑101 (MQ=0)
ggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGac > 2:1010127/9‑100 (MQ=0)
ggccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGAt > 2:2012375/9‑101 (MQ=2)
gccggtggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:2382902/94‑1 (MQ=2)
gTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCTTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:2806348/101‑1 (MQ=255)
tgccgcgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGAT.GATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:827328/95‑1 (MQ=2)
ccgcacgtCGCCCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:3499682/95‑1 (MQ=2)
cggcggtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGa > 2:4672455/6‑101 (MQ=2)
cacgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:5455354/4‑101 (MQ=2)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:5019911/101‑1 (MQ=255)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:1877176/101‑1 (MQ=255)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 1:2493750/101‑1 (MQ=255)
cGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 1:3754592/1‑101 (MQ=255)
acgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGGGGGTCGAAac > 2:4506727/3‑101 (MQ=2)
tgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacc > 2:4372877/1‑101 (MQ=255)
tgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacc > 2:1435087/1‑101 (MQ=255)
cgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGAT.GATCAAATCCGCA.ATCGGCCGG.GCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac < 2:1837263/100‑1 (MQ=2)
cgtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAact > 2:2467327/2‑100 (MQ=2)
cgtCGCCCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAact < 1:416306/100‑2 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacca < 1:156012/101‑1 (MQ=255)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactg > 2:1919656/1‑99 (MQ=2)
gtCGCTCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacta < 2:4742461/101‑3 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAacccc < 2:3970681/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccg < 2:1309263/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccg > 2:1585938/1‑98 (MQ=2)
tcgcccccaGCGGGGGCGTGGATTGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAactgcgt < 2:5098867/98‑6 (MQ=0)
gCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCt > 2:1524406/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCtt < 1:2385728/101‑1 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtg > 1:5062185/1‑95 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACAATGCG.GCGCGGGC.CTAT.GGCTGACGGACCC.GCCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactgcgtgc < 1:4599151/101‑8 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctg > 1:2451242/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGc > 1:257802/1‑101 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcggc < 2:5563063/101‑8 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACA.CCCG.GCGCCGCAGCGAG.TGCGTCTGGAACA.GGATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAactatgctgg > 1:110422/1‑93 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCg > 2:2585378/1‑101 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACAAAAAG.CCGCCGACAAACGCGGCAACCGG.CCC.G.GCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAaccccgcgccg > 2:766770/1‑93 (MQ=0)
ccccGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCgg < 1:1291006/101‑1 (MQ=255)
cgcgGGGGCGTGGATCGAAGCATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGAtt < 1:2288666/101‑1 (MQ=255)
gcgGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTg < 2:637539/101‑1 (MQ=255)
gggggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTc > 1:4679000/1‑101 (MQ=255)
gggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCAc < 2:4164540/101‑1 (MQ=255)
gggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCAc < 1:2198476/101‑1 (MQ=255)
ggCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACt > 2:3776007/1‑101 (MQ=255)
gCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACtt < 1:1006253/101‑1 (MQ=255)
cGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACttt < 1:631630/101‑1 (MQ=255)
tGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTcg < 2:1088342/101‑1 (MQ=255)
tCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCggg < 2:120903/101‑1 (MQ=255)
gAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGc < 1:5008258/101‑1 (MQ=255)
gAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGc > 1:4745816/1‑101 (MQ=255)
gAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGc < 1:346580/101‑1 (MQ=255)
aaaCATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCg > 1:690893/1‑101 (MQ=255)
aCATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGaa < 2:92620/101‑1 (MQ=255)
ctcG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGt < 2:3367270/101‑1 (MQ=255)
ctcG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGt < 1:1060393/101‑1 (MQ=255)
|
GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGCCGCTTTGGCGGTCGACAGGCTGGTAACGTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCTCG.GTGCCGTCGCTCG.TCCAGCCGG.CCT.GCTCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCACCTTGCGGATTGTCACTTTCGCGGGGCGAAGCGT > NC_014034/1395434‑1395634
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|