| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,760 | T→G | 16.3% | intergenic (+572/‑359) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,760 | 0 | T→G | 16.3% | 154.2 ‑1.9 ‑0.0 | 355 | intergenic (+572/‑359) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (20/38): ref base (136/161): total (156/199) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.48e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.34e-01 | ||||||||||
Only 100 of 372 total aligned reads displayed.
GAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCG > NC_014034/1395660‑1395859
|
gAACCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCt < 2:1826005/101‑1 (MQ=255)
gAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCt > 2:664709/1‑101 (MQ=255)
gAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCt > 1:201600/1‑101 (MQ=255)
aaaCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g < 1:568993/101‑1 (MQ=255)
aaCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.t > 1:3056047/1‑101 (MQ=255)
aaCATCTGCATGTAGGCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.t < 1:1067295/101‑1 (MQ=255)
aCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.tc < 2:4751448/101‑1 (MQ=255)
cATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.tcg > 2:2760594/1‑101 (MQ=255)
cATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.tcg > 2:5626044/1‑101 (MQ=255)
tCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.tcgtc > 2:4044563/1‑101 (MQ=255)
tCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.tcgtc > 2:5309163/1‑101 (MQ=255)
tCTGCATGTAGGCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.tcgtc < 1:3792757/101‑1 (MQ=255)
cggaaTGTGGCCGGCGGGCGGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.tcgtcg < 1:3198635/97‑1 (MQ=37)
cTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.gcgtcg > 2:2000575/1‑101 (MQ=255)
cATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTc > 2:3288296/1‑101 (MQ=255)
tAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTccccc > 1:3696244/1‑101 (MQ=255)
aGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTcccccc < 1:2385475/101‑1 (MQ=255)
aGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTcccccc < 1:928122/101‑1 (MQ=255)
aGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTcccccc > 2:4107372/1‑101 (MQ=255)
gggcggGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCcgcg < 1:4770231/100‑1 (MQ=255)
aGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTg > 1:4009694/1‑101 (MQ=255)
gtcggAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTgg < 2:5332759/97‑1 (MQ=255)
gTTGGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTgg < 1:2551897/101‑1 (MQ=255)
tgcgcgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGa < 1:4474266/92‑1 (MQ=0)
cGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:5226279/101‑1 (MQ=255)
cGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATc > 2:467342/1‑101 (MQ=255)
aagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTggg > 2:5389143/7‑100 (MQ=2)
aagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGa < 1:3569634/95‑1 (MQ=2)
cgcgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1890331/94‑1 (MQ=0)
gCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:3107992/101‑1 (MQ=255)
ccGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa > 2:343802/1‑101 (MQ=255)
ccGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:1663106/101‑1 (MQ=255)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCg > 2:3052593/4‑101 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:1238478/4‑101 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGACCg < 1:3305952/98‑1 (MQ=0)
gCAGTCGCTCCCCACGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc < 1:4976881/101‑1 (MQ=255)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaaa > 1:485874/1‑100 (MQ=2)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:2615394/1‑101 (MQ=2)
aGTCGCCCCCCGCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTg < 2:3452869/101‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca < 2:1047468/101‑2 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.ATGGCCAGAT..CCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCt < 2:696738/101‑1 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgc < 1:295341/101‑1 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgc < 1:5223186/101‑1 (MQ=255)
ctCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca < 2:499125/100‑2 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCta > 2:789097/1‑100 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacc < 2:3341576/101‑4 (MQ=2)
cGCTCCCCCCGCGGGGGCGGGGATCGAAACC.GGTACGG.ATCTG..GGGTAAACGG..AAGGGCT.C.GAGTGGCTCCCCACGCGGGGGGGGGGGGCGAAAcaagcag > 2:1203382/1‑95 (MQ=12)
cGCGCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGACCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtat < 2:4955516/101‑3 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGGGGATCGAAAcacccgg > 2:4887347/1‑95 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatgag < 2:5061920/101‑6 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatgag > 1:606988/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatgag > 1:4546118/1‑96 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggc < 1:2743989/101‑8 (MQ=0)
ccccccGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggc > 1:3869007/1‑94 (MQ=0)
cccccGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggcg < 1:1734069/101‑9 (MQ=2)
cccccGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGGGGCGTgc > 2:2634501/1‑100 (MQ=255)
cccGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggcgcc < 2:1499589/101‑11 (MQ=2)
cccGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggcgcc < 1:3957830/101‑11 (MQ=2)
ccGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGtt > 2:882449/1‑101 (MQ=255)
cgGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGcc < 1:5083518/101‑1 (MQ=255)
gggggCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTTGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCa > 2:238112/1‑101 (MQ=255)
gggggCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCa > 1:1707042/1‑101 (MQ=255)
ggggCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAg < 2:3167987/101‑1 (MQ=255)
gggCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGt < 1:1518457/101‑1 (MQ=255)
ggCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTg > 2:1086876/1‑101 (MQ=255)
gCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGa < 1:1361793/101‑1 (MQ=255)
gCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGa > 2:5548195/1‑101 (MQ=255)
gTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATa < 2:3951481/101‑1 (MQ=255)
gTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATa > 2:5708346/1‑101 (MQ=255)
tGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAg > 2:3183469/1‑101 (MQ=255)
tGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAg > 1:2220312/1‑101 (MQ=255)
tGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAg > 1:1157957/1‑101 (MQ=255)
gATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGAc < 1:5361798/101‑1 (MQ=255)
aCT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTgg < 2:2460646/101‑1 (MQ=255)
cT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGa > 2:3091211/1‑101 (MQ=255)
cT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGa < 1:560281/101‑1 (MQ=255)
cT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGa > 1:2095772/1‑101 (MQ=255)
cT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGa < 1:4146816/101‑1 (MQ=255)
t.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGTCAGTGATAGACGCCGTGGAc < 2:2942923/101‑1 (MQ=255)
tATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTc > 2:4076936/1‑101 (MQ=255)
tATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTc > 2:2291426/1‑101 (MQ=255)
aTGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCg < 2:3637207/101‑1 (MQ=255)
tGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGc < 2:2100366/101‑1 (MQ=255)
gg.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGaagatcgg > 2:450290/1‑94 (MQ=255)
cTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcccc > 1:4361293/1‑101 (MQ=255)
tG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTccccc > 2:3783005/1‑101 (MQ=255)
tG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTccccc > 1:5510495/1‑101 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcccccc < 1:467392/101‑1 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcccccc > 1:339382/1‑101 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTcccccc < 1:798477/101‑1 (MQ=255)
cgcAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCcgc < 1:3146324/101‑1 (MQ=255)
cAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCgg > 2:421550/1‑101 (MQ=255)
cAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCgg > 1:1617412/1‑101 (MQ=255)
aaaCGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCggg > 2:1386939/1‑101 (MQ=255)
aaaCGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCggg > 2:3722761/1‑101 (MQ=255)
cGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGc < 1:665394/101‑1 (MQ=255)
cGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGc < 2:5761638/101‑1 (MQ=255)
aaaGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTg < 1:4804818/101‑1 (MQ=255)
aaaGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTg > 1:1023535/1‑101 (MQ=255)
aaGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGAGGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTgg > 1:4926827/1‑101 (MQ=255)
|
GAAACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCGGCGTGAGTTGCCAGTGATAGACGCCGTGGACGTCGCTCCCCCCGCGGGGGCGTGGATCG > NC_014034/1395660‑1395859
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|