| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,395,763 | C→G | 17.7% | intergenic (+575/‑356) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,395,763 | 0 | C→G | 17.7% | 134.6 ‑2.2 0.0 | 326 | intergenic (+575/‑356) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (20/38): ref base (124/144): total (144/182) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.10e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00 | ||||||||||
Only 100 of 372 total aligned reads displayed.
ACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC > NC_014034/1395663‑1395863
|
aCATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.tc < 1:1854577/101‑1 (MQ=255)
aTCTGCAGGTAGTCGGCGGGCAGTCCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.tcgt < 2:4097254/101‑1 (MQ=255)
tCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.tcgtc < 2:3016019/101‑1 (MQ=255)
tCTGCATGTAGGCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.g.tcgtc < 1:3792757/101‑1 (MQ=255)
cTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.gcgtcg > 2:2000575/1‑101 (MQ=255)
gctcgtggTCGGCGGGGGGCTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCt < 2:5325610/94‑1 (MQ=37)
gCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGcc > 1:3102790/1‑100 (MQ=255)
gCATGGAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCt < 1:4846620/101‑1 (MQ=255)
cATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTc > 1:536504/1‑101 (MQ=255)
tGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTccc < 2:4073200/101‑1 (MQ=255)
gTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGGCT.G.TCGTCGCTcccc > 2:2154292/1‑101 (MQ=255)
tAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTccccc > 1:3696244/1‑101 (MQ=255)
aGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTcccccc < 1:928122/101‑1 (MQ=255)
cggcggGCAGTGCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCcgcg < 1:5530866/101‑1 (MQ=255)
gggCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCggggg > 2:560231/1‑101 (MQ=255)
aGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTg > 2:3793058/1‑101 (MQ=255)
aGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTg > 1:4009694/1‑101 (MQ=255)
tgtgcaGCCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTgg < 2:3618546/96‑1 (MQ=255)
gTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTgg > 1:196773/1‑101 (MQ=255)
ttCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGa < 2:5761060/101‑1 (MQ=255)
caagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTgg > 2:1821220/8‑101 (MQ=2)
cGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:5226279/101‑1 (MQ=255)
cGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATc > 1:472028/1‑101 (MQ=255)
gcgcgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGAt < 1:4890815/93‑1 (MQ=0)
aagattcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGa < 1:3569634/95‑1 (MQ=2)
gcgctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCg > 1:2555406/7‑101 (MQ=0)
ccGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:1663106/101‑1 (MQ=255)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:1194636/98‑1 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 2:3171379/98‑1 (MQ=2)
attcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:2679353/98‑1 (MQ=2)
tcAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:3757600/100‑1 (MQ=2)
gCAGTCGCTCCCACCGCGGGGGCGTGGATCGAAACT.GGTATGG.CTCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc > 1:3133615/1‑101 (MQ=255)
tggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc < 2:4029717/99‑1 (MQ=2)
ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcc > 2:5300578/2‑101 (MQ=2)
aGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:2374453/1‑101 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca < 1:4525489/101‑2 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca < 2:1047468/101‑2 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.ATGGCCAGAT..CCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCt < 2:696738/101‑1 (MQ=2)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCt < 2:5368573/101‑1 (MQ=2)
ctCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAca < 2:499125/100‑2 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcac < 2:2724002/101‑3 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCta > 2:789097/1‑100 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtat > 1:4591808/1‑99 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtat > 1:1687567/1‑99 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTgcg.g > 2:3314413/1‑101 (MQ=255)
cGCTCCCCCCGCGGGGGCGGGGATCGAAACC.GGTACGG.ATCTG..GGGTAAACGG..AAGGGCT.C.GAGTGGCTCCCCACGCGGGGGGGGGGGGCGAAAcaagcag > 2:1203382/1‑95 (MQ=12)
cGCGCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGACCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtat < 2:4955516/101‑3 (MQ=2)
gCTCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatg > 1:1576866/1‑98 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGGGGATCGAAAcacccgg > 2:4887347/1‑95 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatgag > 1:606988/1‑96 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.TG.AT.G.ACCAGATCCGCAATCGG..CCGGGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCtatgag < 2:5061920/101‑6 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGt < 2:2913854/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggc < 1:4785185/101‑8 (MQ=0)
ccccccGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggc > 1:3869007/1‑94 (MQ=0)
cccccGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGa < 1:5097431/101‑1 (MQ=255)
cccGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggcgcc < 1:3957830/101‑11 (MQ=2)
cccGCGGGGGCGTGGATCGAAACTCGGCAAGG.ACATC..GCCGATCTGGGTAAGGCCG.G.TGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcacccggcgcc < 2:1499589/101‑11 (MQ=2)
ccGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGtt > 2:882449/1‑101 (MQ=255)
gggggCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTTGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCa > 2:238112/1‑101 (MQ=255)
gggCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGt < 2:4623966/101‑1 (MQ=255)
gggCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGt < 1:1518457/101‑1 (MQ=255)
ggCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTg < 1:2922227/101‑1 (MQ=255)
ggCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTg > 2:1086876/1‑101 (MQ=255)
gCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGa > 2:3422218/1‑101 (MQ=255)
gCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGa < 1:1361793/101‑1 (MQ=255)
gTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATa > 2:5705846/1‑101 (MQ=255)
gTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATa < 1:1086951/101‑1 (MQ=255)
tGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAg > 1:2220312/1‑101 (MQ=255)
tCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGc < 1:3194997/101‑1 (MQ=255)
gAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCg > 2:3267762/1‑101 (MQ=255)
aaCT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTg > 1:3271256/1‑101 (MQ=255)
aCT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTgg < 2:2460646/101‑1 (MQ=255)
cT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGa > 1:2095772/1‑101 (MQ=255)
cT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGa < 1:560281/101‑1 (MQ=255)
cT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGa < 1:4146816/101‑1 (MQ=255)
t.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.c < 2:257769/101‑1 (MQ=255)
tATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTc > 2:2291426/1‑101 (MQ=255)
aTGG.ATCTG..GCTCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCg < 2:4717644/101‑1 (MQ=255)
gg.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGaagatcgg > 2:450290/1‑94 (MQ=255)
cTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGATGCCAGTGATAGA.CGCCGTGGA.CGTCGCTcccc > 1:4939063/1‑101 (MQ=255)
tG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTccccc > 2:3693871/1‑101 (MQ=255)
g..gCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTcccccc < 1:798477/101‑1 (MQ=255)
gcAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGCGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCcccg > 1:3373228/1‑101 (MQ=255)
cAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCgg > 2:421550/1‑101 (MQ=255)
cAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCgg > 2:3450623/1‑101 (MQ=255)
aaaCGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCggg > 2:3063034/1‑101 (MQ=255)
aaaCGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCggg > 2:1386939/1‑101 (MQ=255)
aaCGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTccccccagatcg > 2:657197/1‑95 (MQ=255)
aaCGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCgggg < 2:3139127/101‑1 (MQ=255)
cGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGc < 1:665394/101‑1 (MQ=255)
gg..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCg < 1:1716095/101‑1 (MQ=255)
aaaGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTg > 1:1023535/1‑101 (MQ=255)
ggacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA.CTGCGTGCGCGCCATG.AATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGt < 1:2484643/92‑1 (MQ=0)
aGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGa < 1:4392092/101‑1 (MQ=255)
gacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA.CTGCGTGCGCGCCATG.AATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTg < 1:2996774/93‑1 (MQ=0)
gacccgcccgtcgCTCCCCCCGCGGGGGCGTGGATCGAAA.CTGCGTGCGCGCCATG.AATTCATCGAGCGCCATCGAGCGTCGCTCCCCCCGCGGGGGCGTg > 1:5039368/9‑101 (MQ=0)
gTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGGGGAt > 2:5530636/1‑101 (MQ=255)
cT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCg < 1:1243645/101‑1 (MQ=255)
g.tcgtcGCTCCCCCCGCGGGGGCGTGGATCGAAAGCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGaa > 1:5761005/1‑101 (MQ=255)
cgtcgCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc > 1:5303001/1‑101 (MQ=255)
|
ACATCTGCATGTAGTCGGCGGGCAGTTCGAGCCGCAGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACT.GGTATGG.ATCTG..GCGCAAACGG..AAAGTCT.G.TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGCG.GCGTGAGTTGCCAGTGATAGA.CGCCGTGGA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC > NC_014034/1395663‑1395863
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|