| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 1,396,022 | C→G | 12.5% | intergenic (+834/‑97) | RCAP_rcc01306 → / → RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 1,396,022 | 0 | C→G | 12.5% | 99.0 0.0 ‑0.4 | 339 | intergenic (+834/‑97) | RCAP_rcc01306/RCAP_rcc01307 | Cas2 family CRISPR‑associated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (19/23): ref base (134/162): total (154/185) | ||||||||||
| Fisher's exact test strand distribution p-value = 1.00e+00 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 3.90e-01 | ||||||||||
Only 100 of 361 total aligned reads displayed.
GATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGG > NC_014034/1395922‑1396122
|
aTCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACg > 2:4832365/1‑101 (MQ=255)
cGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGcc < 1:4301024/101‑1 (MQ=255)
cGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGcc < 2:2056968/101‑1 (MQ=255)
gAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGccc > 2:5213506/1‑100 (MQ=255)
gAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCt > 2:4903752/1‑101 (MQ=255)
aaaCGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTg > 1:4166521/1‑101 (MQ=255)
cGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.cg < 1:238145/101‑1 (MQ=255)
gATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.cgc < 1:2132675/101‑1 (MQ=255)
tGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..Gt < 2:3759686/101‑1 (MQ=255)
gCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTc > 2:3604996/1‑101 (MQ=255)
cGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCg < 2:2095655/101‑1 (MQ=255)
gCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTTCC..TCACCCCTGC.CGC..GTCGCTcccccc > 1:5117047/1‑101 (MQ=255)
ccTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCcg < 1:4464022/101‑1 (MQ=255)
ccTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCcg > 2:3854736/1‑101 (MQ=255)
cTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCcgc > 2:3286711/1‑101 (MQ=255)
cGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGc > 1:3645473/1‑101 (MQ=255)
gggCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCg > 2:748416/1‑101 (MQ=255)
atctgTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCCCGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGt < 1:1444162/97‑1 (MQ=255)
cAGTCGAGTTGTCGCTCCCCCCGCGGGGGCGTGGACCGAAACTCGCCCCCGCTCCGCGCTGGCC..TCACCCCTGC.CGC..GTCTCTCCCCCCGCGGGGGCGTgg < 2:3723268/101‑1 (MQ=25)
aggggccTGGTCGCCCCCCCCGCGGGGGCGTGGATCGAACCTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGa < 1:1007181/95‑1 (MQ=38)
gTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGAt < 2:1247863/101‑1 (MQ=255)
gTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTAGAt > 2:1444069/1‑101 (MQ=255)
tGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 1:5530928/101‑1 (MQ=255)
tGGACGGGTCGCGCCCCCCGCGGGGTCGTGGATCTAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATc < 2:870029/101‑1 (MQ=38)
ttcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:1350890/96‑1 (MQ=9)
tgcgcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 2:2231940/96‑1 (MQ=2)
ggcgcggTCGCGCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATc < 1:630716/96‑1 (MQ=2)
aCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:3102602/101‑1 (MQ=255)
aCTGGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:2493161/101‑1 (MQ=255)
aCTGGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 1:4371265/101‑1 (MQ=255)
gcggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa < 2:5585802/99‑1 (MQ=2)
cTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGaaa < 2:2434526/101‑1 (MQ=255)
tGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCNGGGGCGTGGATCGAAAc > 2:2564574/1‑101 (MQ=255)
gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAg > 1:3410985/1‑101 (MQ=255)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActt < 2:1959601/101‑3 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActt < 2:2321253/101‑3 (MQ=2)
tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActt < 1:1981962/101‑3 (MQ=2)
cGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgc < 1:474198/101‑1 (MQ=255)
gcccccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCGGTCAGCCCCGTATTGCGCGC.TG...GTCGCTCCCCCCGCGGGGGCGGGGATCGAAActtgat > 1:4106998/3‑96 (MQ=2)
cTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcgc > 2:2703023/1‑101 (MQ=255)
cTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGgcgc > 1:5278945/1‑101 (MQ=255)
tCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg > 1:5663087/1‑95 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatg > 1:4916508/1‑95 (MQ=2)
tCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCa < 1:4348258/101‑1 (MQ=255)
ccccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatga < 1:161132/101‑8 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACTCGGCCTCGATCCG.GTCAGCC..TC.GTATTGCGCGCTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAActtgatga > 1:1508549/1‑94 (MQ=2)
ccccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCAt > 1:2998106/1‑101 (MQ=255)
cccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATc > 2:50999/1‑101 (MQ=255)
ccccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCt > 1:797114/1‑101 (MQ=255)
cccGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTg < 2:5357209/101‑1 (MQ=255)
cgGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCT.CCCCCGCGGGGGCGTGGGTCGAAACAGGCGCATCTGTTGta > 2:4005173/1‑101 (MQ=255)
ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat < 1:457218/101‑1 (MQ=255)
ggggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtat > 1:5413820/1‑101 (MQ=255)
gggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata < 2:4209748/101‑1 (MQ=255)
gggCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGtata < 2:3674332/101‑1 (MQ=255)
gatctGGATCGAAACTCCCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTatat < 2:2926023/97‑1 (MQ=255)
gCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATg < 1:323689/101‑1 (MQ=255)
cGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGc > 2:4989369/1‑101 (MQ=255)
cGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGc > 1:329171/1‑101 (MQ=255)
cGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGc > 2:652216/1‑101 (MQ=255)
tGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCGGCGCATCTGATGTATATGccc > 2:4335156/1‑101 (MQ=255)
tGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGccc > 2:5501937/1‑101 (MQ=255)
tGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGccc < 1:3760206/101‑1 (MQ=255)
aTCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGt > 1:54862/1‑101 (MQ=255)
aTCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGt < 2:2396051/101‑1 (MQ=255)
tCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTg < 1:4832646/101‑1 (MQ=255)
caaaCCCGCCCTCGATCCGCGCTTGCC..TCCCGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgag < 1:1075237/100‑1 (MQ=255)
aaaCTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga < 2:5784638/101‑1 (MQ=255)
aaaCTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTgaga < 2:3338963/101‑1 (MQ=255)
aaCTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGAc > 1:3885628/1‑101 (MQ=255)
aaCTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGAc < 1:1312119/101‑1 (MQ=255)
aCTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACg > 1:1160518/1‑101 (MQ=255)
aCTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACg > 1:2060887/1‑101 (MQ=255)
cccccTCGATCCGCGCTTGCC..CCACGCCTGC.CGC..GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt < 1:3078861/99‑1 (MQ=255)
cGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCt < 2:1582880/101‑1 (MQ=255)
cccTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGt < 1:1868232/101‑1 (MQ=255)
ccTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTc < 2:5634478/101‑1 (MQ=255)
cTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTca < 2:1642209/101‑2 (MQ=255)
cGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCt < 1:2557373/101‑1 (MQ=255)
cGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCt > 2:3070969/1‑101 (MQ=255)
aTCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcc < 1:2680595/101‑1 (MQ=255)
tCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTccc > 2:3440071/1‑101 (MQ=255)
ccGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccc > 2:4435855/1‑101 (MQ=255)
cgcgCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTccccc > 1:2752515/1‑101 (MQ=255)
gcgcTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccccc < 1:888500/101‑1 (MQ=255)
gcgcTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccccc < 2:5164008/101‑1 (MQ=255)
gcgcTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccccc < 2:1729951/101‑1 (MQ=255)
gcgcTTGCC..TCACGCCTGC.CAC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTcccccc < 2:4069357/101‑1 (MQ=255)
cgcTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCcg < 1:2900941/101‑1 (MQ=255)
cgcTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCcg < 1:4067869/101‑1 (MQ=255)
cTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCcgcg > 2:1763149/1‑101 (MQ=255)
tGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCggg > 2:52321/1‑101 (MQ=255)
tGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGAGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCggg > 2:1384590/1‑101 (MQ=255)
c..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc < 2:1074996/101‑1 (MQ=255)
c..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc > 2:1306994/1‑101 (MQ=255)
c..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc > 1:225422/1‑101 (MQ=255)
c..TCACGCCTGC.CGC..GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGc < 1:3471539/101‑1 (MQ=255)
cACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGt > 1:5190397/1‑101 (MQ=255)
ccGCCTGC.CGC..GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTg < 2:5425361/100‑1 (MQ=255)
aCGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTg < 1:5791677/101‑1 (MQ=255)
|
GATCGAAACGATGCGTTCATGGCCTACGTCGGGCAGTGGACTGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTCGCCCTCGATCCGCGCTTGCC..TCACGCCTGC.CGC..GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAGGCGCATCTGATGTATATGCCCGGTGAGACGGCTGTCGCTCCCCCCGCGGGGGCGTGG > NC_014034/1395922‑1396122
Base quality scores:
ATCG
< 3 ≤
ATCG
< 19 ≤
ATCG
< 27 ≤
ATCG
< 33 ≤
ATCG
< 40 ≤
ATCG
|