BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,397,132	G→A	4.1%	T338T (ACG→ACA)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,397,132	0	G→A	4.1%	21.2 ‑2.8 ‑1.6	270	T338T (ACG→ACA)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (2/9): ref base (130/129): total (132/138)
Fisher's exact test strand distribution p-value = 6.08e-02
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.55e-02

Only 100 of 290 total aligned reads displayed.


CCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTGCACCAGATCCGCG  >  NC_014034/1397032‑1397231


ccGTCGCGCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACg                                                                                                      <  1:150676/101‑1 (MQ=255)


 cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGt                                                                                                     <  1:684051/101‑1 (MQ=255)


 cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGt                                                                                                     <  1:5212117/101‑1 (MQ=255)


  gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTc                                                                                                    <  2:854432/101‑1 (MQ=255)


  gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTc                                                                                                    <  2:3361004/101‑1 (MQ=255)


  gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTc                                                                                                    >  2:2020201/1‑101 (MQ=255)


   tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTcc                                                                                                   <  2:5407658/101‑1 (MQ=255)


   tCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTcc                                                                                                   >  2:3259051/1‑101 (MQ=255)


      cTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGc                                                                                                <  1:2329432/101‑1 (MQ=255)


       tCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAggt                                                                                               >  1:3518067/1‑99 (MQ=255)


       tCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCt                                                                                               >  2:4294974/1‑101 (MQ=255)


       tCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCt                                                                                               >  1:4518304/1‑101 (MQ=255)


       tCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCt                                                                                               >  1:1100904/1‑101 (MQ=255)


       tCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCt                                                                                               <  1:1162546/101‑1 (MQ=255)


        ccccccGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTc                                                                                              <  2:185712/101‑1 (MQ=255)


        ccccccGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTc                                                                                              <  2:2696294/101‑1 (MQ=255)


        ccccccGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTc                                                                                              <  1:1617934/101‑1 (MQ=255)


        ccccccGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTc                                                                                              <  1:2063879/101‑1 (MQ=255)


           cccGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTcgcg                                                                                           <  1:2237822/101‑1 (MQ=255)


            ccGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCgcgc                                                                                          >  1:1724289/1‑101 (MQ=255)


             cgcgGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGcc                                                                                         >  2:3604870/1‑101 (MQ=255)


              gcgGGGGCGTGGATCGAAACCGCGCCCTGCGGGTGATGGCG.ACGGGCACCACGGCGGTCGCTCCCCCCGCGGGGGCGTGGCGCGAAACGGccgggagatgc                                                                                          >  2:581498/1‑92 (MQ=38)


               cgGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCcac                                                                                       >  1:840885/1‑101 (MQ=255)


                 ggggCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACAt                                                                                     <  2:2212354/101‑1 (MQ=255)


                 ggggCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACAt                                                                                     <  2:382440/101‑1 (MQ=255)


                 ggggCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCGCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACAt                                                                                     <  2:3578605/101‑1 (MQ=255)


                      gTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCtt                                                                                >  2:2433880/1‑101 (MQ=255)


                        ggATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCg                                                                              >  1:778116/1‑101 (MQ=255)


                        ggATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCg                                                                              >  1:5545293/1‑101 (MQ=255)


                        ggATCGAAACGGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCg                                                                              <  2:1020654/101‑1 (MQ=255)


                         gATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGa                                                                             <  2:3765122/101‑1 (MQ=255)


                            cGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCCCGCGCCCCATGTATTCCACC.g                                                                         >  1:3854972/1‑101 (MQ=38)


                             gAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGCTCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.Gt                                                                        >  1:2807164/1‑101 (MQ=255)


                             gAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.Gt                                                                        <  1:3262954/101‑1 (MQ=255)


                             gAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.Gt                                                                        <  2:3979124/101‑1 (MQ=255)


                             gAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.Gt                                                                        <  2:778048/101‑1 (MQ=255)


                              aaaCTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTg                                                                       >  1:5775591/1‑101 (MQ=255)


                              aaaCTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTg                                                                       <  2:1877888/101‑1 (MQ=255)


                                  tGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGcc                                                                   <  1:243790/101‑1 (MQ=255)


                                       tCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGc                                                              >  2:1951694/1‑101 (MQ=255)


                                         t.tGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTc                                                            >  1:4793348/1‑101 (MQ=255)


                                          tgcgatGATGGGGCGCGTGCT.CGTGTC.GTCGGTCCCCACGAGGGGGCGCCGATCGAAAGGTCCAGCTTGCGGCACATGTCTTCGGCC.GTGCGCCGTCGCTc                                                            <  2:4542513/96‑1 (MQ=255)


                                           tGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTcc                                                           >  2:2190667/1‑101 (MQ=255)


                                           tGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTcc                                                           >  2:74441/1‑101 (MQ=255)


                                           tGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTcc                                                           <  1:5446200/101‑1 (MQ=255)


                                                gATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCcg                                                      >  1:137791/1‑101 (MQ=255)


                                                gATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCcg                                                      >  1:5169680/1‑101 (MQ=255)


                                                 aTGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCcgc                                                     >  2:2786131/1‑101 (MQ=255)


                                                   ggggCGCGAGCA.CATGTC.GTCGCCCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCgg                                                   <  1:5620696/101‑1 (MQ=255)


                                                    gggCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCggg                                                  >  1:964139/1‑101 (MQ=255)


                                                      gcgcGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCggggg                                                >  1:4774396/1‑101 (MQ=255)


                                                       cgcgAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGc                                               <  1:2963278/101‑1 (MQ=255)


                                                         cgAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCACGCGGGGGCGt                                             >  2:2382890/1‑101 (MQ=255)


                                                          gAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTg                                            >  2:2848340/1‑101 (MQ=255)


                                                          gAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTg                                            <  2:5033895/101‑1 (MQ=255)


                                                           aGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTgg                                           <  2:4182114/101‑1 (MQ=255)


                                                             gcgcaTGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGa                                          >  1:4273248/4‑101 (MQ=255)


                                                              a.caTGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATc                                        <  2:1152893/101‑1 (MQ=255)


                                                                caTGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                       >  2:122367/1‑101 (MQ=255)


                                                                caTGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                       <  2:4651050/101‑1 (MQ=255)


                                                                caTGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                       >  1:2102726/1‑101 (MQ=255)


                                                                 aTGTC.GTCGCGCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                      <  1:2418124/101‑1 (MQ=255)


                                                                  tGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                     <  1:3572775/101‑1 (MQ=255)


                                                                  ctgcggtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACG.CGGCAACCGGCCCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                      <  2:184872/96‑1 (MQ=2)


                                                                   tgcggtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACG.CGGCAACCGGCCCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                     <  1:4563999/97‑1 (MQ=2)


                                                                   tgcggtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACG.CGGCAACCGGCCCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                     <  1:5488032/97‑1 (MQ=2)


                                                                   tgcggtcgCCCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACG.CGGCAACCGGCCCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                     <  2:3471743/97‑1 (MQ=2)


                                                                   gtc.gtcGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                    >  1:265886/1‑101 (MQ=255)


                                                                   gtc.gtcGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                    >  1:5265673/1‑101 (MQ=255)


                                                                     cggtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACG.CGGCAACCGGCCCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                   >  2:3055741/3‑101 (MQ=2)


                                                                     c.gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACg                                  >  2:4598578/1‑101 (MQ=255)


                                                                       gtcgCTCCCCCCGCGGGGGCGTGGATCGAAACAAAAAGCCGCCGACAAACG.CGGCAACCGGCCCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAccc                                 <  2:799304/101‑3 (MQ=2)


                                                                        tcgCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACgtg                                >  1:5035652/1‑101 (MQ=255)


                                                                         cgCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACgtgt                               >  1:4217262/1‑101 (MQ=255)


                                                                           cTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCt                             >  1:1976989/1‑101 (MQ=255)


                                                                               ccccGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCa                         <  2:5267360/101‑1 (MQ=255)


                                                                               ccccGCGGGGGCGTGGATCGAAACGTCCAGCTAGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGTTCGAAACGTGTCTGCCa                         <  2:5709281/101‑1 (MQ=255)


                                                                               ccccGCGGGGGCGGGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCa                         <  2:4774115/101‑1 (MQ=255)


                                                                                cccGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCac                        <  2:2580727/101‑1 (MQ=255)


                                                                                  cgcgGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCacga                      >  1:2584201/1‑101 (MQ=255)


                                                                                     gggggCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGc                   >  1:1876171/1‑101 (MQ=255)


                                                                                     gggggCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGc                   >  2:1563953/1‑101 (MQ=255)


                                                                                      ggggCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGcc                  >  2:3718165/1‑101 (MQ=255)


                                                                                       gggCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGccc                 >  2:1832088/1‑101 (MQ=255)


                                                                                       gggCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GGGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGccc                 <  1:4868778/101‑1 (MQ=255)


                                                                                        ggCGTGGATCGAAACGTGCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCTCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCt                >  2:5764287/1‑101 (MQ=255)


                                                                                        ggCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCt                >  2:4952151/1‑101 (MQ=255)


                                                                                        ggCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCt                <  2:5135846/101‑1 (MQ=255)


                                                                                        ggCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCt                <  2:5563948/101‑1 (MQ=255)


                                                                                         gCGTGGATCGAAACGTCCAGCTCGCGCCACATGGCTTTGACC.GTGCGCCGTCGCTCCTCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTg               <  1:4950485/101‑1 (MQ=255)


                                                                                            tGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTGCAc            >  1:315771/1‑101 (MQ=255)


                                                                                             ggATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTGCAcc           <  1:3817779/101‑1 (MQ=255)


                                                                                               aTCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCCCGACGCCCTGCACCAg         >  2:104493/1‑101 (MQ=255)


                                                                                                 cGAAACGTCCAGCTCGCGCCACATGTCTTCGCCC.GTGCGCCGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTGCACCAGAt       <  1:3945448/101‑1 (MQ=255)


                                                                                                 cGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.TTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTGCACCAGAt       <  2:5364307/101‑1 (MQ=255)


                                                                                                 cGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTTCACCAGac       >  2:3938799/1‑100 (MQ=255)


                                                                                                 cGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTGCACCAGAt       <  1:69833/101‑1 (MQ=255)


                                                                                                  gAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGACAGAAACGTGTCTGCCACGACGCACTGCACCCGaca      >  2:1689792/1‑99 (MQ=38)


                                                                                                     aCGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTGCACCAGATCcgc   <  2:1360882/101‑1 (MQ=255)


                                                                                                      cGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTGCACCAGATCcgcg  >  1:4437727/1‑101 (MQ=255)


CCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTGCCGTCT.TGAGTGATGGGGCGCGAGCA.CATGTC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCGCGCCACATGTCTTCGACC.GTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCACGACGCCCTGCACCAGATCCGCG  >  NC_014034/1397032‑1397231

Base quality scores:


ATCG

< 3 ≤


ATCG

< 19 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG