BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,397,233	C→T	1.8%	P372L (CCG→CTG)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,397,233	0	C→T	1.8%	4.7 ‑1.7 ‑0.2	279	P372L (CCG→CTG)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (1/4): ref base (148/126): total (149/130)
Fisher's exact test strand distribution p-value = 1.88e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 6.44e-01

Only 100 of 295 total aligned reads displayed.


TCCAGCTCGCGCCACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGTGGATCGAAACG  >  NC_014034/1397133‑1397333


tCCAGCTCGCGCCACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGcc                                                                                                      <  2:5775296/101‑1 (MQ=255)


tCCAGCTCGCGCCACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACCTGTCTGCCA.CGGCG.CCCCGCACCAGATCCGCGcc                                                                                                      >  2:5427405/1‑101 (MQ=255)


 ccAGCTCGCGCCACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCg                                                                                                     <  1:2749147/101‑1 (MQ=255)


  cAGCTCGCGCCACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGt                                                                                                    <  1:3570896/101‑1 (MQ=255)


     cTCGCGCCACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGc                                                                                                 >  2:3523304/1‑101 (MQ=255)


       cgcgCCACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTc                                                                                               <  1:5282038/101‑1 (MQ=255)


        gcgcCACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTcc                                                                                              <  2:3979627/101‑1 (MQ=255)


         cgcCACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTccc                                                                                             <  2:5265383/101‑1 (MQ=255)


           ccccaTGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTccccc                                                                                           <  2:1253076/98‑1 (MQ=255)


           ccACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTccccc                                                                                           <  1:5114599/101‑1 (MQ=255)


           ccACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTccccc                                                                                           >  1:3951528/1‑101 (MQ=255)


             acaTGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCcg                                                                                         <  1:126510/101‑1 (MQ=255)


               aTGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCcgcg                                                                                       >  2:4062058/1‑101 (MQ=255)


               aTGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCcgcg                                                                                       >  2:4342463/1‑101 (MQ=255)


                 gTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCggg                                                                                     <  2:3370865/101‑1 (MQ=255)


                 gTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCggg                                                                                     <  1:5799115/101‑1 (MQ=255)


                  tCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCgggg                                                                                    >  2:2270507/1‑101 (MQ=255)


                   cTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCggggg                                                                                   >  1:1956111/1‑101 (MQ=255)


                     tccgtggTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCg                                                                                 <  2:1149719/95‑1 (MQ=255)


                     tCGACCGCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTTCCCCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCg                                                                                 <  1:809066/101‑1 (MQ=255)


                       gACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTg                                                                               <  2:5169394/101‑1 (MQ=255)


                        aCCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGGGTgg                                                                              >  2:2740712/1‑101 (MQ=255)


                          cGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                            >  2:4103890/1‑101 (MQ=255)


                             gcggCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGCTGCTGACACCGCCA.ACAAATATGTGGTCAACACTGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                          <  2:3100547/101‑1 (MQ=2)


                             gcgcCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                         <  1:380881/101‑1 (MQ=255)


                             ctatcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGGGTCGAAGA.CCTGGTTGACGCGCTGGATCTGCGGCGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                          <  1:2658345/97‑1 (MQ=2)


                              cggcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGCTGCTGACACCGCCA.ACAAATATGTGGTCAACACTGTCGCTCCCCCCGCGGGGGCGTGGATCGa                                                                         <  1:5732615/98‑1 (MQ=2)


                                gcGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGCTGCTGACACCGCCA.ACAAATATGTGGTCAACACTGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                       <  2:4374305/100‑1 (MQ=2)


                                ccGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac                                                                      >  2:2834992/1‑101 (MQ=255)


                                 cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGCTGCTGACACCGCCA.ACAAATATGTGGTCAACACTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAac                                                                      <  1:1168617/101‑1 (MQ=2)


                                   tCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAcc                                                                   <  1:3335600/101‑1 (MQ=255)


                                   tCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAcc                                                                   >  2:20135/1‑101 (MQ=255)


                                    cGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACcg                                                                  >  2:3280079/1‑101 (MQ=255)


                                     gCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACcgc                                                                 >  2:5060436/1‑101 (MQ=255)


                                     gCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACcgc                                                                 >  1:4320863/1‑101 (MQ=255)


                                        ccccccGCGGGGGCGTGGATCGAACCGTGTCTGCCA.CGACC.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCa                                                              <  1:5443703/101‑1 (MQ=255)


                                        ccccccGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCa                                                              <  2:185054/101‑1 (MQ=255)


                                         cccccGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCAc                                                             >  1:4372834/1‑101 (MQ=255)


                                            ccGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCAcgcg                                                          <  1:130440/101‑1 (MQ=255)


                                            ccGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCAcccc                                                          >  1:219753/1‑98 (MQ=255)


                                               cgGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCAcgcgcgc                                                       >  2:4594879/1‑100 (MQ=255)


                                                 ggggCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGTACCAGATCCGCGCCGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAAc                                                     <  1:4952432/101‑1 (MQ=255)


                                                 ggggCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAAc                                                     <  2:2564609/101‑1 (MQ=255)


                                                 ggggCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAAc                                                     >  2:5729503/1‑101 (MQ=255)


                                                  gggCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACg                                                    <  2:2102609/101‑1 (MQ=255)


                                                  gggCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACg                                                    <  1:3259251/101‑1 (MQ=255)


                                                  gggCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACg                                                    >  2:4700103/1‑101 (MQ=255)


                                                   ggCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCGCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACgg                                                   >  1:386068/1‑101 (MQ=255)


                                                   ggCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACgg                                                   >  2:831434/1‑101 (MQ=255)


                                                   ggCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACgg                                                   >  1:2123283/1‑101 (MQ=255)


                                                     cGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCg                                                 >  1:890369/1‑101 (MQ=255)


                                                     cGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCg                                                 <  2:5524653/101‑1 (MQ=255)


                                                      gTGGATCGAAACGTGTCTGCCC.CGTCG.CGCTGCACCAGATCCGCGCTGTCACTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGt                                                <  2:5391484/101‑1 (MQ=37)


                                                      gTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGt                                                >  2:3071621/1‑101 (MQ=255)


                                                      gTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGt                                                >  2:1734598/1‑101 (MQ=255)


                                                       tGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTc                                               >  2:5026508/1‑101 (MQ=255)


                                                       gggATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTc                                               <  1:2580831/100‑1 (MQ=255)


                                                        ggATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCa                                              >  1:5011308/1‑101 (MQ=255)


                                                         gATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAg                                             >  2:3500995/1‑101 (MQ=255)


                                                          aTCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGc                                            >  2:1394381/1‑101 (MQ=255)


                                                           tCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGcc                                           >  1:5244605/1‑101 (MQ=255)


                                                            cGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGccc                                          <  1:3016944/101‑1 (MQ=255)


                                                            cGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGccc                                          >  1:5682347/1‑101 (MQ=255)


                                                             gAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGACCGGCGGCAGcccc                                         >  2:2659478/1‑101 (MQ=255)


                                                             gAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGcccc                                         >  2:4489875/1‑101 (MQ=255)


                                                                aCGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCcgcg                                      >  1:3458478/1‑101 (MQ=255)


                                                                  gtgtCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGaa                                    >  1:4535029/1‑101 (MQ=255)


                                                                  gtgtCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGaa                                    >  1:4583628/1‑101 (MQ=255)


                                                                  gtgtCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGaa                                    >  2:2132527/1‑101 (MQ=255)


                                                                   tgtCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAAc                                   <  1:1832198/101‑1 (MQ=255)


                                                                    gtCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACg                                  >  2:4209994/1‑101 (MQ=255)


                                                                     tCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACgc                                 >  2:3749531/1‑100 (MQ=255)


                                                                      cTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTc                                <  2:3845361/101‑1 (MQ=255)


                                                                       tGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTcc                               >  1:1027131/1‑100 (MQ=255)


                                                                       tGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCg                               <  2:1956000/101‑1 (MQ=255)


                                                                       tGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCg                               <  1:1919662/101‑1 (MQ=255)


                                                                        gCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGc                              >  2:3175961/1‑101 (MQ=255)


                                                                         ccA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCt                             <  1:142539/101‑1 (MQ=255)


                                                                           a.cgacg.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTcc                           >  1:4776015/1‑101 (MQ=255)


                                                                             cgacg.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTccc                          <  1:2848501/101‑1 (MQ=255)


                                                                              gacg.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTcccc                         <  1:1720649/101‑1 (MQ=255)


                                                                               acg.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTccccc                        <  1:1014622/101‑1 (MQ=255)


                                                                                cg.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTcccccc                       <  1:5558248/101‑1 (MQ=255)


                                                                                cg.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTcccccc                       >  2:4803271/1‑101 (MQ=255)


                                                                                   cccTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCcgc                     <  2:238893/101‑1 (MQ=255)


                                                                                   cccTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCcgc                     >  1:133033/1‑101 (MQ=255)


                                                                                    ccTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCcgcg                    <  2:1602257/101‑1 (MQ=255)


                                                                                    ccTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCcgcg                    >  1:2420866/1‑101 (MQ=255)


                                                                                     cTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCgg                   >  2:219089/1‑101 (MQ=255)


                                                                                          ccAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGCGCg              >  1:1475391/1‑101 (MQ=255)


                                                                                           cAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGt             >  1:517965/1‑101 (MQ=255)


                                                                                            aGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGTg            <  2:1211606/101‑1 (MQ=255)


                                                                                              aTCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGTGGa          >  1:973722/1‑101 (MQ=255)


                                                                                              aTCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGTGGa          <  2:5555097/101‑1 (MQ=255)


                                                                                                 cgcgCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGTGGATCg       >  2:3655184/1‑101 (MQ=255)


                                                                                                  gcgcCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGTGGATCGa      >  1:3212310/1‑101 (MQ=255)


                                                                                                    gcCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGTGGATCGaaa    >  2:1505068/1‑101 (MQ=255)


                                                                                                    gcCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGTGGATCGaaa    >  2:1457895/1‑101 (MQ=255)


                                                                                                     ccGTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACCCCGCACGCGCGAGCGGCGTCAGCCCCGCCAGCGTCGCTCCCCCCGCGGGAGCGTGGATCGAAAc   <  1:2910318/101‑1 (MQ=25)


                                                                                                      cGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGTGGATCGAAACg  >  1:201909/1‑101 (MQ=255)


TCCAGCTCGCGCCACATGTCTTCGACCGTGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTGTCTGCCA.CGACG.CCCTGCACCAGATCCGCGCCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCGCGCACGCGCGAACGGCGTCAGCCCCGCGAACGTCGCTCCCCCCGCGGGAGCGTGGATCGAAACG  >  NC_014034/1397133‑1397333

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG