BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,397,490	T→G	12.1%	C458G (TGC→GGC)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,397,490	0	T→G	12.1%	102.3 ‑0.7 ‑0.5	340	C458G (TGC→GGC)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (24/17): ref base (156/142): total (181/159)
Fisher's exact test strand distribution p-value = 5.07e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 2.86e-01

Only 100 of 363 total aligned reads displayed.


GGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTG  >  NC_014034/1397390‑1397589


ggATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCt                                                                                                        >  2:333012/1‑101 (MQ=255)


 gATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTg                                                                                                       >  2:5779912/1‑101 (MQ=255)


    cGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGca...c                                                                                                 >  2:3479717/1‑101 (MQ=255)


     gAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGca...cc                                                                                                >  2:1745309/1‑101 (MQ=255)


      aaaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGGGGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGca...ccc                                                                                               >  2:4625830/1‑100 (MQ=255)


       aaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGca...ccac                                                                                              >  2:2928224/1‑101 (MQ=255)


       aaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCACCCTGca...ccac                                                                                              >  2:4339955/1‑101 (MQ=255)


        aCTCGTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCa...ccacc                                                                                             <  1:2659627/101‑1 (MQ=255)


          tctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCgg                                                                                           >  1:3855218/1‑101 (MQ=255)


             tCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCg                                                                                        >  1:4245795/1‑101 (MQ=255)


              cAATGGATATTGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.CACTC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGc                                                                                       >  1:5014008/1‑101 (MQ=37)


               aaTGGATATGACAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCt                                                                                      <  2:1172391/101‑1 (MQ=255)


                  ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTccc                                                                                   >  2:2467511/1‑101 (MQ=255)


                  ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTccc                                                                                   >  2:2020451/1‑101 (MQ=255)


                   gATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTcccc                                                                                  >  1:2410290/1‑101 (MQ=255)


                    atatGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTccccc                                                                                 <  2:823890/101‑1 (MQ=255)


                     tatGGCAAACCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTcccccc                                                                                <  2:3935351/101‑1 (MQ=255)


                     tatGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTcccccc                                                                                >  1:3767913/1‑101 (MQ=255)


                      atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCcg                                                                               >  1:5743877/1‑101 (MQ=255)


                      atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCcg                                                                               <  1:4786504/101‑1 (MQ=255)


                           aaaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCgggg                                                                          >  2:1681765/1‑101 (MQ=255)


                           aaaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCgggg                                                                          >  1:2056491/1‑101 (MQ=255)


                           aaaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCgggg                                                                          >  1:1969433/1‑101 (MQ=255)


                           aaaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCgggg                                                                          >  1:4068928/1‑101 (MQ=255)


                            aaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCggggg                                                                         >  2:1440316/1‑101 (MQ=255)


                            aaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCggggg                                                                         <  2:2186609/101‑1 (MQ=255)


                            aaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCggggg                                                                         <  1:3503704/101‑1 (MQ=255)


                             aaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGc                                                                        <  1:1049347/101‑1 (MQ=255)


                              aCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCg                                                                       >  2:5595212/1‑101 (MQ=255)


                                 gTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTgg                                                                    >  1:4434902/1‑101 (MQ=255)


                                 gTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTgg                                                                    <  1:5067364/101‑1 (MQ=255)


                                  ccgataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCT...CGATC.GTCGCTCCCCCCGCGGGGGCGTg                                                                     <  2:4520457/91‑1 (MQ=0)


                                   cgataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCT...CGATC.GTCGCTCCCCCCGCGGGGGCGTgg                                                                    >  1:1542516/10‑101 (MQ=0)


                                   ccGCGGCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                  <  2:5690091/101‑1 (MQ=255)


                                    gataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCT...CGATC.GTCGCTCCCCCCGCGGGGGCGTGGa                                                                   <  2:1406599/93‑1 (MQ=0)


                                    cgcgACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCTGGGGCGTGGATc                                                                 <  1:3141933/101‑1 (MQ=255)


                                    cgcgACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                 <  1:1918030/101‑1 (MQ=255)


                                    cgcgACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                 <  2:1257351/101‑1 (MQ=255)


                                     ataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCT...CGATC.GTCGCTCCCCCCGCGGGGGCGGGGAt                                                                  >  2:5094077/8‑101 (MQ=0)


                                      taccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCT...CGATC.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                 <  1:3710473/95‑1 (MQ=2)


                                      cgACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCC.GCCTC.ACCACGCAA.GCGCCCGGCA...CCACCGGTCGCTCCCTCCGCGGGGGCGTGGATCGa                                                               >  2:471473/1‑101 (MQ=25)


                                         cctGTCGCCGCCCCCGCGTGGGGGAGGGACGAAACACCT.TCATC.GCCCCGCAA.CCGCCGTGCC...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaac                                                            <  2:922023/99‑1 (MQ=16)


                                         cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaac                                                            >  1:1346438/1‑101 (MQ=255)


                                         cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaac                                                            <  2:4116071/101‑1 (MQ=255)


                                          aTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaaca                                                           >  1:2760084/1‑101 (MQ=255)


                                          aTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaaca                                                           >  2:5223621/1‑101 (MQ=255)


                                             tCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAcc                                                        >  1:97394/1‑101 (MQ=255)


                                             tCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAcc                                                        <  1:3275877/101‑1 (MQ=255)


                                             tCGCTCCCCCCGCGGGGGCGTGGATCGAAAC.CCG.CCA.C.GCCTTGGAA.CAGCGCGCCATTGGCCCCGGTCGCTCCCCCCGCGGGGGCGCGGGTCGAaaccac                                                         >  1:804522/1‑101 (MQ=0)


                                              cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAAccc                                                       <  1:5773307/101‑1 (MQ=255)


                                                ccccccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCT...CGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgt                                                       <  2:1899379/99‑6 (MQ=2)


                                                ccccccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCT...CGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgt                                                       <  2:495912/99‑6 (MQ=2)


                                                   cccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCT...CGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcca                                                    >  2:1563948/1‑93 (MQ=2)


                                                   cccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCa                                                  <  2:397268/101‑1 (MQ=255)


                                                   cccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCa                                                  <  1:5096106/101‑1 (MQ=255)


                                                   cccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCa                                                  >  1:5469949/1‑101 (MQ=255)


                                                    ccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCT...CGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtccag                                                   <  1:1663365/101‑10 (MQ=2)


                                                    ccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCAt                                                 <  2:3172504/101‑1 (MQ=255)


                                                     cccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCTCGGGGGCGTGGATCCAAACAACCCGTTCTTg                                                >  1:1821282/1‑101 (MQ=38)


                                                     cccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATg                                                <  1:667877/101‑1 (MQ=255)


                                                     cccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATg                                                >  2:302400/1‑101 (MQ=255)


                                                      ccGCGGGGGCGTGGATCGAAACACCG.TCATT.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATgg                                               <  1:5250688/101‑1 (MQ=255)


                                                      ccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATgg                                               <  2:4853578/101‑1 (MQ=255)


                                                        gcgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGcc                                             <  1:1256653/101‑1 (MQ=255)


                                                         cgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGccc                                            >  1:1134436/1‑101 (MQ=255)


                                                         cgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGccc                                            <  2:3362940/101‑1 (MQ=255)


                                                          gggggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATAATGGCCCg                                           >  1:892680/1‑101 (MQ=255)


                                                              gCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTc                                       <  1:2928391/101‑1 (MQ=255)


                                                                gTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAg                                     >  1:4151734/1‑101 (MQ=255)


                                                                     tCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGcgccg                                <  1:1206052/101‑1 (MQ=255)


                                                                      cNNNNCACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCNAAACAACCCGATCATGGCCCGCCTCAGcgccgc                               >  2:3212456/1‑101 (MQ=255)


                                                                        aaaCACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCgcgc                             >  2:74260/1‑101 (MQ=255)


                                                                        aaaCACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCgcgc                             >  1:2573122/1‑101 (MQ=255)


                                                                         aaCACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCt                            <  1:236997/101‑1 (MQ=255)


                                                                           cacCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGa                          <  2:263783/101‑1 (MQ=255)


                                                                           cacCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGa                          >  2:3625373/1‑101 (MQ=255)


                                                                            acCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGAc                         >  2:2523140/1‑101 (MQ=255)


                                                                             ccG.TCATC.ACCACGCAC.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACg                        <  2:3767670/101‑1 (MQ=255)


                                                                              cG.TCATC.CCCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGActt                       <  1:3844756/101‑3 (MQ=255)


                                                                               g.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACgcc                      >  2:2835101/1‑99 (MQ=255)


                                                                                  catc.aCCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGc                    <  1:769372/101‑1 (MQ=255)


                                                                                   atc.cCCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCt                   <  1:2190789/101‑1 (MQ=255)


                                                                                   atc.aCCACGCAA.CCGCCCTGCA...CCCCCGGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCt                   <  1:1481508/101‑1 (MQ=255)


                                                                                   atc.aCCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCt                   <  1:2270630/101‑1 (MQ=255)


                                                                                    tc.aCCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTc                  <  2:2056374/101‑1 (MQ=255)


                                                                                    cc.accacGCAA.CCCCCCGGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTc                  <  2:5481547/100‑1 (MQ=255)


                                                                                       accacGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTccc                <  1:3321922/101‑1 (MQ=255)


                                                                                         cacGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTccccc              >  1:1742685/1‑101 (MQ=255)


                                                                                          acGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTcccccc             <  1:5364708/101‑1 (MQ=255)


                                                                                          acGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTcccccc             >  2:2313764/1‑101 (MQ=255)


                                                                                           cGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcg            <  1:3541896/101‑1 (MQ=255)


                                                                                           cGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcg            <  1:380966/101‑1 (MQ=255)


                                                                                            gCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcgc           <  2:2355602/101‑1 (MQ=255)


                                                                                              aa.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCgg         >  2:5043873/1‑101 (MQ=255)


                                                                                              aa.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCgg         >  2:5380486/1‑101 (MQ=255)


                                                                                                   gCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGc     <  1:474413/101‑1 (MQ=255)


                                                                                                    cccTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCg    >  2:5330201/1‑101 (MQ=255)


                                                                                                      cTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTg  <  2:4245535/101‑1 (MQ=255)


                                                                                                      cTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTg  <  2:127250/101‑1 (MQ=255)


                                                                                                      cTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTg  <  2:3712684/101‑1 (MQ=255)


GGATCGAAACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCA...CCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTG  >  NC_014034/1397390‑1397589

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG