BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,397,497	C→T	13.1%	T460I (ACC→ATC)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,397,497	0	C→T	13.1%	102.6 ‑0.5 0.0	312	T460I (ACC→ATC)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (23/18): ref base (139/132): total (162/150)
Fisher's exact test strand distribution p-value = 6.17e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.00e+00

Only 100 of 348 total aligned reads displayed.


AACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  >  NC_014034/1397397‑1397596


aaCTCTTCAATGGATATGGCAGAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcaccac                                                                                                      >  1:3292526/1‑101 (MQ=255)


aaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcaccac                                                                                                      >  2:2928224/1‑101 (MQ=255)


aaCTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGcaccac                                                                                                      <  2:5283025/101‑1 (MQ=255)


  ctctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCg                                                                                                    <  1:4452120/101‑1 (MQ=255)


  ctctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCg                                                                                                    <  2:3218179/101‑1 (MQ=255)


   tctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCgg                                                                                                   <  2:4566918/101‑1 (MQ=255)


    ctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGt                                                                                                  >  2:236964/1‑101 (MQ=255)


    ctTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGt                                                                                                  <  1:3515555/101‑1 (MQ=255)


      tCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCg                                                                                                >  1:2782620/1‑101 (MQ=255)


          tGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTcc                                                                                            <  1:890804/101‑1 (MQ=255)


           ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTccc                                                                                           >  2:2020451/1‑101 (MQ=255)


           ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTccc                                                                                           >  2:1679713/1‑101 (MQ=255)


           ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTccc                                                                                           >  2:2467511/1‑101 (MQ=255)


           ggATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CAGCCCTGCACCACCGGTCGCTccc                                                                                           >  2:4164639/1‑101 (MQ=255)


            gATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTcccc                                                                                          >  1:2410290/1‑101 (MQ=255)


              tatGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTcccccc                                                                                        <  2:3044541/101‑1 (MQ=255)


               atGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACCCCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCcg                                                                                       <  2:833822/101‑1 (MQ=255)


                tGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCcgc                                                                                      >  1:2186731/1‑101 (MQ=255)


                 ggCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCcgcg                                                                                     <  2:3793612/101‑1 (MQ=255)


                    aaaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCgggg                                                                                  <  2:4398389/101‑1 (MQ=255)


                    aaaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCgggg                                                                                  >  2:1385830/1‑101 (MQ=255)


                     aaaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCggggg                                                                                 <  2:2186609/101‑1 (MQ=255)


                      aaCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGc                                                                                <  1:1049347/101‑1 (MQ=255)


                       aCCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCg                                                                               >  2:5595212/1‑101 (MQ=255)


                          gTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTgg                                                                            >  1:968838/1‑101 (MQ=255)


                          gTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTgg                                                                            <  1:5067364/101‑1 (MQ=255)


                           ccgaanccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGCTCAACTCCGCAAGCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTg                                                                             <  1:1691969/91‑1 (MQ=0)


                            cgataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTgg                                                                            <  1:3324853/92‑1 (MQ=0)


                            cgataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTgg                                                                            >  1:1542516/10‑101 (MQ=0)


                            cgataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTgg                                                                            >  1:5789188/10‑101 (MQ=0)


                            ccGCGGCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                          <  2:5690091/101‑1 (MQ=255)


                            ccGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGAt                                                                          <  2:1413668/101‑1 (MQ=255)


                              gcgACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                        <  2:5390341/101‑1 (MQ=255)


                              ataccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGGGGAt                                                                          >  1:2963205/8‑101 (MQ=0)


                               taccgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATc                                                                         >  1:1777458/7‑101 (MQ=2)


                                 aCATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGaaa                                                                     >  1:4178730/1‑101 (MQ=255)


                                  cgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                                      <  1:609406/98‑1 (MQ=2)


                                  cctGTCGCCGCCCCCGCGTGGGGGAGGGACGAAACACCT.TCATC.GCCCCGCAA.CCGCCGTGCCCCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaac                                                                    <  2:922023/99‑1 (MQ=16)


                                  cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaac                                                                    >  1:1921595/1‑101 (MQ=255)


                                  cATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAaac                                                                    >  1:1346438/1‑101 (MQ=255)


                                    cgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaac                                                                    <  2:3749110/100‑1 (MQ=2)


                                    cgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCCGCCGGGCGCGATC.GCCGCTCCCCCCGCGGGGGCGTGGATCGAaac                                                                    >  2:5197803/2‑101 (MQ=2)


                                      tCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACcc                                                                >  1:2335502/1‑101 (MQ=255)


                                       cGCTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggt                                                                 <  1:801042/101‑4 (MQ=2)


                                        cccccccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCg                                                              <  1:1199049/98‑1 (MQ=255)


                                         ccccccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgt                                                               <  2:1899379/99‑6 (MQ=2)


                                         ccccccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgt                                                               <  2:495912/99‑6 (MQ=2)


                                         cTCCCCCCGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTACCCCCGCGGGGGCGTGGATCGAcacggagt                                                               >  1:3616779/1‑96 (MQ=2)


                                          tCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGAt                                                            >  1:4420743/1‑101 (MQ=255)


                                           ccccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATc                                                           <  1:5595589/101‑1 (MQ=255)


                                           ccccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATc                                                           <  2:1232059/101‑1 (MQ=255)


                                            cccccTCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCa                                                          <  2:1266363/101‑1 (MQ=255)


                                            cccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtcca                                                            >  2:1563948/1‑93 (MQ=2)


                                            cccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCa                                                          >  1:5469949/1‑101 (MQ=255)


                                            cccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCa                                                          >  1:3822330/1‑101 (MQ=255)


                                            cccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCa                                                          <  1:5096106/101‑1 (MQ=255)


                                             ccccGCGGGGGCGTGGATCGAAACATCGATGATCAAATCCGCAATCGGCCGGGCTCGATC.GTCGCTCCCCCCGCGGGGGCGTGGATCGAaacggtgtccag                                                           <  1:1663365/101‑10 (MQ=2)


                                             ccccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCAt                                                         <  2:3172504/101‑1 (MQ=255)


                                              cccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATg                                                        <  2:1769706/101‑1 (MQ=255)


                                              cccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATg                                                        <  1:4831626/101‑1 (MQ=255)


                                               ccGCGGGGGCGTGGATCGAAACACCG.TCATT.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATg.g                                                      <  1:5250688/101‑1 (MQ=255)


                                               ccGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATg.g                                                      >  1:268016/1‑101 (MQ=255)


                                                 gcgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.Gcc                                                    <  1:2020562/101‑1 (MQ=255)


                                                 gcgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.Gcc                                                    <  1:1256653/101‑1 (MQ=255)


                                                 gcgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.Gcc                                                    <  2:3512484/101‑1 (MQ=255)


                                                 gcgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.Gcc                                                    >  1:3202834/1‑101 (MQ=255)


                                                  cgGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.Gccc                                                   >  1:1134436/1‑101 (MQ=255)


                                                    ggggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGc                                                 <  2:3999705/101‑1 (MQ=255)


                                                     gggCGTGGATCGAAACCCCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGcc                                                <  2:5794635/101‑1 (MQ=255)


                                                      ggCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTTGATCGAAACAACCCGATCATG.GCCCGCCt                                               >  1:3852407/1‑101 (MQ=255)


                                                       gCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTc                                              <  1:4104137/101‑1 (MQ=255)


                                                            gATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAgcgc                                         >  2:25384/1‑101 (MQ=255)


                                                            gATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAgcgc                                         >  1:3710900/1‑101 (MQ=255)


                                                               cGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCCGcgccgc                                      >  2:3957486/1‑101 (MQ=255)


                                                                 aaaCACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCgcgc                                    >  1:2573122/1‑101 (MQ=255)


                                                                 aaaCACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCgcgc                                    >  2:339084/1‑101 (MQ=255)


                                                                 aaaCACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCgcgc                                    >  2:74260/1‑101 (MQ=255)


                                                                  aaCACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCt                                   <  1:236997/101‑1 (MQ=255)


                                                                  aaCACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCt                                   >  2:4691473/1‑101 (MQ=255)


                                                                    cacCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGa                                 <  2:263783/101‑1 (MQ=255)


                                                                     cccG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGAc                                <  1:3801799/100‑1 (MQ=255)


                                                                       cG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGt                              >  2:5025190/1‑101 (MQ=255)


                                                                        g.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACgcc                             >  2:2835101/1‑99 (MQ=255)


                                                                          tcatc.aCCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCg                            >  2:103393/1‑101 (MQ=255)


                                                                           catc.aCCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGc                           <  1:769372/101‑1 (MQ=255)


                                                                            atc.aCCACGCAA.CCGCCCTGCACCCCCGGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCt                          <  1:1481508/101‑1 (MQ=255)


                                                                             tc.aCCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTc                         <  2:2056374/101‑1 (MQ=255)


                                                                             cc.accacGCAA.CCCCCCGGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTc                         <  2:5481547/100‑1 (MQ=255)


                                                                              c.accacGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTcc                        <  2:5085233/101‑1 (MQ=255)


                                                                                   acGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTcccccc                    <  1:5364708/101‑1 (MQ=255)


                                                                                   acGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTcccccc                    >  2:2313764/1‑101 (MQ=255)


                                                                                      cAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCcgcg                 <  1:4773674/101‑1 (MQ=255)


                                                                                       aa.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCCCCCCCCGCgg                >  2:4718922/1‑101 (MQ=255)


                                                                                            gCCCGGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGc            <  1:3957730/101‑1 (MQ=255)


                                                                                             cccTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCg           >  2:5330201/1‑101 (MQ=255)


                                                                                              ccTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGt          >  2:3666177/1‑101 (MQ=255)


                                                                                               cTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTg         <  2:4245535/101‑1 (MQ=255)


                                                                                                  caccacCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGGAt      <  2:3292588/101‑1 (MQ=255)


                                                                                                    ccaccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGGATCg    <  1:2222844/101‑1 (MQ=255)


                                                                                                     ccccGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAA.CTGACCCGGCACCGGCCTATGCGCTG.GACGTGGTCGCTCCCCCCGCGGGGGCGTGGATCGaa  >  1:1842902/3‑101 (MQ=2)


AACTCTTCAATGGATATGGCAAAACCGTCCGCGACATGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCG.TCATC.ACCACGCAA.CCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATG.GCCCGCCTCAGCGCCGCGCTGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAA  >  NC_014034/1397397‑1397596

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 27 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG