BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_014034	1,397,557	C→G	15.4%	A480G (GCC→AGC)	RCAP_rcc01307 →	hypothetical protein

Read alignment evidence...
	seq id	position		change	freq	score	reads	annotation	genes	product
*	NC_014034	1,397,557	0	C→G	15.4%	116.9 ‑1.6 ‑0.0	304	A480G (GCC→GGC)	RCAP_rcc01307	hypothetical protein
Reads supporting (aligned to +/- strand): new base (18/29): ref base (127/130): total (145/159)
Fisher's exact test strand distribution p-value = 2.04e-01
Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.03e-01

Only 100 of 341 total aligned reads displayed.


GATCGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGG  >  NC_014034/1397457‑1397656


  tCGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGcgccg                                                                                                      >  2:1021237/1‑101 (MQ=255)


     aaaCACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCg.cgc                                                                                                  >  2:74260/1‑101 (MQ=255)


     aaaCACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCg.cgc                                                                                                  >  2:3554289/1‑101 (MQ=255)


      aaCACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCt                                                                                                 >  2:4691473/1‑101 (MQ=255)


       acacCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.g                                                                                               <  1:1104576/101‑1 (MQ=255)


        cacCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.Ga                                                                                              <  2:263783/101‑1 (MQ=255)


        cacCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.Ga                                                                                              >  2:3625373/1‑101 (MQ=255)


         cccGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.c                                                                                            <  1:3801799/100‑1 (MQ=255)


         acCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.c                                                                                            >  2:2523140/1‑101 (MQ=255)


           cGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGt                                                                                          >  2:5025190/1‑101 (MQ=255)


            gTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.Cgcc                                                                                         >  2:2835101/1‑99 (MQ=255)


               atcaCCACGCAACCGCCCTGCACCCCCGGTCCCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCt                                                                                      <  1:1481508/101‑1 (MQ=255)


               atcaCCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCt                                                                                      <  1:3822898/101‑1 (MQ=255)


               atcaCCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCt                                                                                      >  1:2607650/1‑101 (MQ=255)


                tcaCCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTc                                                                                     <  2:2056374/101‑1 (MQ=255)


                ccaccacGCAACCCCCCGGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTc                                                                                     <  2:5481547/100‑1 (MQ=255)


                 cactacGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTcc                                                                                    >  2:4322439/1‑101 (MQ=255)


                 caccacGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTcc                                                                                    <  2:5085233/101‑1 (MQ=255)


                  accacGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTccc                                                                                   >  1:523486/1‑101 (MQ=255)


                     acGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTcccccc                                                                                <  1:5364708/101‑1 (MQ=255)


                     acGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTcccccc                                                                                >  2:901066/1‑101 (MQ=255)


                        cAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCcgcg                                                                             <  1:4773674/101‑1 (MQ=255)


                         aaCCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCgg                                                                            >  2:5380486/1‑101 (MQ=255)


                         aaCCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCAGCgg                                                                            <  2:4897496/101‑1 (MQ=255)


                         aaCCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCCCCCCCCGCgg                                                                            >  2:4718922/1‑101 (MQ=255)


                            cGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCggggg                                                                         >  1:2345018/1‑101 (MQ=255)


                                 ggaacaggatgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGC.TCGA.C..CGAGTTCACGGCG.GGCT.AT.CGTCGCTCCCCCCGCGGGGGCGTGGa                                                                   <  1:1010202/91‑1 (MQ=2)


                                     tcgagcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAAGC.CAAGGCCGCAGCAGCG..GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATc                                                                 <  2:5621194/95‑1 (MQ=0)


                                     cgctgcgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG..CGGC.GAACACCG.ATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCg                                                                <  1:766838/95‑1 (MQ=2)


                                       gctggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTTGATGACCA.GAT.C..CGCAATCG.GCCG.GGCTCGATCGTCGCTCCCCCCGCGGGGGCGTGGATCGaa                                                              >  1:1270437/4‑101 (MQ=2)


                                         cGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                            >  1:5588896/1‑101 (MQ=255)


                                          ggTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCGCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACa                                                           <  1:929925/101‑1 (MQ=255)


                                          cgTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAAGC.CAAGGCCGCAGCAGCG..GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                            <  1:82644/100‑1 (MQ=2)


                                          cgTCGCCCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAAGC.CAAGGCCGCAGCAGCG..GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAc                                                            <  2:4198967/100‑1 (MQ=2)


                                           gacGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaa                                                          >  2:3492002/3‑100 (MQ=255)


                                           gTCGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG..CGGC.GAACACCG.ATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAt                                                          <  1:4666627/101‑1 (MQ=2)


                                            tCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATc                                                         >  1:1904913/1‑101 (MQ=255)


                                             cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG..CGGC.GAACACCG.ATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcg                                                        <  1:1586032/101‑2 (MQ=2)


                                             cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAAGC.CAAGGCCGCAGCAGCG..GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaa                                                         <  1:3035318/101‑3 (MQ=2)


                                             cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAAGC.CAAGGCCGCAGCAGCG..GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaa                                                         >  2:1224800/1‑99 (MQ=2)


                                             cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAAGC.CAAGGCCGCAGCAGCG..GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaa                                                         <  2:1390842/101‑3 (MQ=2)


                                             cGCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAAGC.CAAGGCCGCAGCAGCG..GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaa                                                         <  1:2082591/101‑3 (MQ=2)


                                              gCTCCCCCCGCGGGGGCGTGGGTCGAAACACCCCGAACCTGTCGG..CGGC.GAACACCG.ATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcga                                                       >  1:3286248/1‑99 (MQ=2)


                                              gCTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG..CGGC.GAACACCG.ATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcga                                                       >  2:3816304/1‑99 (MQ=2)


                                              gCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAAGC.CAAGGCCGCAGCAGCG..GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaaa                                                        <  2:4993897/101‑4 (MQ=2)


                                              gCTCCCCCCGCGGGGGCGTGGATCGAAACACCAATGCCGAAGC.CAAGGCCGCAGCAGCG..GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaaa                                                        >  2:1553241/1‑98 (MQ=2)


                                              gCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCcg                                                       >  2:3074379/1‑101 (MQ=255)


                                              gCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCcg                                                       >  1:1189406/1‑101 (MQ=255)


                                               cTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGC.TCGA.C..CGAGTTCACGGCG.GGCT.AT.CGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAAcggggcga                                                     >  2:3158415/1‑94 (MQ=2)


                                               cTCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG..CGGC.GAACACCGATGCC.G..CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgat                                                      <  2:3322691/101‑4 (MQ=2)


                                                tCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGC.TCGA.C..CGAGTTCACGGCG.GGCT.AT.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAcgggtcgaa                                                    <  2:1792929/101‑9 (MQ=2)


                                                tCCCCCCGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG..CGGC.GAACACCG.ATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatg                                                     >  1:2855559/1‑97 (MQ=2)


                                                  cccccGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG..CGGC.GAACACCG.ATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatgat                                                   <  1:3565673/101‑7 (MQ=2)


                                                  cccccGCGGGGGCGTGGATCGAAACACCAATGCCGAAGC.CAAGGCCGCAGCAGCG..GCT.GC.GGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACaaaaagcc                                                    <  2:5250879/101‑8 (MQ=0)


                                                   ccccGCGGGGGCGTTGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGAt                                                  <  2:3852165/101‑1 (MQ=255)


                                                   ccccGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGAt                                                  <  2:4136939/101‑1 (MQ=255)


                                                    cccGCGGGGGCGTGGATCGAAACACCCCGAACCTGTCGG..CGGC.GAACACCG.ATAC.CG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATcgatgatca                                                 <  1:5667739/101‑9 (MQ=0)


                                                     ccGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCg                                                <  2:2187822/101‑1 (MQ=255)


                                                       gcgGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGc                                              <  1:1745408/101‑1 (MQ=255)


                                                       gcgGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGc                                              >  1:2243043/1‑101 (MQ=255)


                                                        cgGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCg                                             >  1:4616252/1‑101 (MQ=255)


                                                         gggggCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGt                                            >  2:4101642/1‑101 (MQ=255)


                                                           gggCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGCCCCCACCCCGCCGGGGGCGGGGATCGAAAGAACCGCGGATCGGCGCGa                                          >  2:1353659/1‑101 (MQ=255)


                                                             gCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcc                                        <  2:4431657/101‑1 (MQ=255)


                                                              cGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAccc                                       >  2:2660237/1‑101 (MQ=255)


                                                              cGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAccc                                       >  2:1898290/1‑101 (MQ=255)


                                                                tGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgc                                     >  2:3841246/1‑101 (MQ=255)


                                                                tGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgc                                     >  1:4111341/1‑101 (MQ=255)


                                                                 ggATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccccc                                    >  2:723943/1‑101 (MQ=255)


                                                                 agATCGAAACAACCGGATCATGCC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCTGATCGGCGTGAcccgcc                                    <  2:3275296/100‑1 (MQ=255)


                                                                   ctCGAAACAACCCGGTCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGGCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgcccc                                  <  2:2874002/100‑1 (MQ=255)


                                                                   aTCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgcccc                                  <  1:2158737/101‑1 (MQ=255)


                                                                     cGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGAcccgcccccc                                >  1:4854378/1‑99 (MQ=255)


                                                                      gAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACccgccccgcc                               >  1:2196941/1‑101 (MQ=255)


                                                                       aaaCAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgccccgccc                              >  1:3850196/1‑101 (MQ=255)


                                                                       aaaCAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgccccgccc                              >  1:371742/1‑101 (MQ=255)


                                                                       aaaCAACCAGAGCATGGC.C..CCCCTCAGCGCCG.CACG.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCcgccccgccc                              <  1:644530/101‑1 (MQ=37)


                                                                        aacaacCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCa                             >  2:1680940/1‑101 (MQ=255)


                                                                        aacaacCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCa                             <  1:3349709/101‑1 (MQ=255)


                                                                         acaccCCGATCAGGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCAt                            <  1:2523282/101‑1 (MQ=255)


                                                                         acaacCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCAt                            >  2:2408911/1‑101 (MQ=255)


                                                                          caacCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCacc                           >  2:1497255/1‑99 (MQ=255)


                                                                           aacCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCg                          >  1:4208906/1‑101 (MQ=255)


                                                                           aacCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCg                          >  2:4622675/1‑101 (MQ=255)


                                                                           aacCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCg                          <  2:3129213/101‑1 (MQ=255)


                                                                                   cATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTcc                  <  1:3074553/101‑1 (MQ=255)


                                                                                    ctGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTccc                 <  1:1681039/100‑1 (MQ=255)


                                                                                    aTGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTccc                 >  1:3611044/1‑101 (MQ=255)


                                                                                    aTGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTccc                 <  1:5025471/101‑1 (MQ=255)


                                                                                    aTGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTccc                 >  1:2660663/1‑101 (MQ=255)


                                                                                     tGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTcccc                <  1:339128/101‑1 (MQ=255)


                                                                                       gC.C..CGCCTCGGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTcccccc              <  2:3713451/101‑1 (MQ=255)


                                                                                       gC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTcccccc              <  1:5083292/101‑1 (MQ=255)


                                                                                        gac..cGCCGCAGCGCCG.CGCT.GA.CGACGCACCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTcccccc              <  1:2794470/99‑1 (MQ=255)


                                                                                        c.c..cGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCcg             <  1:243880/101‑1 (MQ=255)


                                                                                               ccTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCggg         <  1:4340221/101‑1 (MQ=255)


                                                                                                 tCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCggggg       >  2:5792056/1‑101 (MQ=255)


                                                                                                 tCAGCGCCG.CGCT.GA.CGTCCCCCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCggggg       <  2:2344892/101‑1 (MQ=255)


                                                                                                   aGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCg     >  2:868676/1‑101 (MQ=255)


                                                                                                    gcgcCG.CGCT.GG.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGGCCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGt    <  2:4658037/101‑1 (MQ=255)


GATCGAAACACCGTCATCACCACGCAACCGCCCTGCACCACCGGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACAACCCGATCATGGC.C..CGCCTCAGCGCCG.CGCT.GA.CGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACATCCGCGGATCGGCGTGACCCGCCCCGCCCATCGGTCGCTCCCCCCGCGGGGGCGTGG  >  NC_014034/1397457‑1397656

Base quality scores:


ATCG

< 3 ≤


ATCG

< 17 ≤


ATCG

< 24 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG